Cicer_arietinum_v1_Contig3634

Contig Overview


Name	Cicer_arietinum_v1_Contig3634
Unique Name	Cicer_arietinum_v1_Contig3634
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	745

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
EL814487	EST	EL814487:1..484 -
FE671728	EST	FE671728:318..745 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
EL814487	EL814487	Cicer arietinum	EST
FE671728	FE671728	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: B9I8Z6_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_245011 PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.191e-13
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 1

Query:  310 FSDGLFVDYDVTGILVSEQCKSTSSDLEPSWIGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDNDKNYVSS 591
            F +   ++ + TG   S++  +   D E +WIG EK  PWW  + KDDLASLVA+KSL++I NCDLP P      K P  +P    +D    SS
Sbjct:  100 FKNSKLMEMEPTGWPKSQKDSAYGFDPESAWIGGEKNMPWWRVTDKDDLASLVAQKSLDYITNCDLPPPQKMNIGKYPCARPGSFQHDNTPASS 193

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: B9SBF3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716930 PE=4 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.397e-11
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 1

Query:  217 KNNDSRMTKIEAAL----NNELYLTPKKKNEGEFWFSDGLFVDYDVTGILVSEQCKSTSSDLEPSWIGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDNDKNYVSS 591
            +N D  +   EA +    N + ++ PK   E      +   +D D    L  ++      D E  + G EK+ PWW  + KDDLASLVA+KS+++I NCDLP P     R+ P  +P   D+D +   S
Sbjct:  153 RNRDPNVKNQEAGVLYDKNAQEFIEPKDTKE------NSKLMDLDPFECLRPQKSDDYCFDSESPFSGSEKSVPWWRTTDKDDLASLVAQKSVDYIANCDLPPPQKLHLRRYPHGRPGASDHDDSIALS 275

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: Q6Z2A0_ORYSJ (Os08g0400300 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0086F04.3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.367e-10
Identity = 43/171 (25.15%), Postives = 79/171 (46.20%), Query Frame = 1

Query:    4 LEANIGGDANYTTCQHLNSFESEFDSFSTKLHSDNVKNFDALSCVGSVGSAASTTIALEQQWNTVYPKCMKKNNDSRMTKIEAALNNELYLTPKKKNEGEFWFSDGLFVDYDVTGILVSEQCKSTSSDLEPSWIGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEP 516
            L+ N+GG  N    +HL     E      +  +    + + L C     +        E  W  V    MK ++++ +  ++         +  K+N  +  F+D  F+D+       S+  +    D+   W G E+++PWW  + +++LA LVA+++++HIENCDLP P
Sbjct:   80 LQPNLGGQKNLAG-EHLYFLGREISDKEVEDSAQKNIHDEPLFCEMFDTNPEKIEDVFEPSW-MVSTASMKYSSETGLQDLKNIGGYSQVPSKCKENASDCLFNDKEFLDFKNFNPPPSKNPQKDDFDMNAPWKGGERSQPWWQITDENELALLVAERAMQHIENCDLPRP 248

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: D7UCV3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_46.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027170001 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.093e-9
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 1

Query:  397 SWIGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDNDKNYVSSDANDCTTTTLTS 627
            SWIG EK  PWW  +  D+LASLV +KSL+HIENCDLP P     R  P        +  N+ SS      T TL++
Sbjct:  150 SWIGVEKNEPWWRTADTDELASLVVQKSLDHIENCDLPPPQKMHVRSDPFAPLGSFVHKGNFGSSLDRKAQTGTLSN 226

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: A2YV04_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29154 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.093e-9
Identity = 43/171 (25.15%), Postives = 78/171 (45.61%), Query Frame = 1

Query:    4 LEANIGGDANYTTCQHLNSFESEFDSFSTKLHSDNVKNFDALSCVGSVGSAASTTIALEQQWNTVYPKCMKKNNDSRMTKIEAALNNELYLTPKKKNEGEFWFSDGLFVDYDVTGILVSEQCKSTSSDLEPSWIGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEP 516
            L+ N+GG  N    +HL     E      +  +    + + L C     +        E  W  V    MK ++++ +  ++         +   +N  +  F+D  F+D+       S+  +    D+   W G E++RPWW  + +++LA LVA+++++HIENCDLP P
Sbjct:   80 LQPNLGGQKNLAG-EHLYFLGREISDKEVEDSAQKNIHDEPLFCEMFDTNPEKIEDVFEPSW-MVSTASMKYSSETGLQDLKNIGGYSQVPSKCNENASDCLFNDKEFLDFKNFNPPPSKNPQKDDFDMNAPWKGGERSRPWWQITDENELALLVAERAMQHIENCDLPRP 248

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: Q9ZPY4_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g46550 PE=4 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.251e-9
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1

Query:  334 YDVTGILVSEQCKSTSSDLEPS--W--IGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDND 573
            Y  TG   S + K +    +PS  W  +  EK  PWW  + KD+LASLVA++SL+++ENCDLP P  +  ++     P G D+D
Sbjct:  147 YGSTGYDESSEKKLSELSFDPSSPWNLLSSEKAAPWWRTTDKDELASLVAQRSLDYVENCDLPTP--QKMKRSYYGSPRGFDSD 228

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: Q8LFB0_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.251e-9
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1

Query:  334 YDVTGILVSEQCKSTSSDLEPS--W--IGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDND 573
            Y  TG   S + K +    +PS  W  +  EK  PWW  + KD+LASLVA++SL+++ENCDLP P  +  ++     P G D+D
Sbjct:  147 YGSTGYDESSEKKLSELSFDPSSPWNLLSSEKAAPWWRTTDKDELASLVAQRSLDYVENCDLPTP--QKMKRSYYGSPRGFDSD 228

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: Q8L732_ARATH (Expressed protein OS=Arabidopsis thaliana GN=At2g46550 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.251e-9
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1

Query:  334 YDVTGILVSEQCKSTSSDLEPS--W--IGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDND 573
            Y  TG   S + K +    +PS  W  +  EK  PWW  + KD+LASLVA++SL+++ENCDLP P  +  ++     P G D+D
Sbjct:  147 YGSTGYDESSEKKLSELSFDPSSPWNLLSSEKAAPWWRTTDKDELASLVAQRSLDYVENCDLPTP--QKMKRSYYGSPRGFDSD 228

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: B9DHY8_ARATH (AT2G46550 protein (Fragment) OS=Arabidopsis thaliana GN=AT2G46550 PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.251e-9
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1

Query:  334 YDVTGILVSEQCKSTSSDLEPS--W--IGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDND 573
            Y  TG   S + K +    +PS  W  +  EK  PWW  + KD+LASLVA++SL+++ENCDLP P  +  ++     P G D+D
Sbjct:   92 YGSTGYDESSEKKLSELSFDPSSPWNLLSSEKAAPWWRTTDKDELASLVAQRSLDYVENCDLPTP--QKMKRSYYGSPRGFDSD 173

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Match: B6TRI4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 9.251e-9
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 1

Query:  310 FSDGLFVDYDVTGILVSEQCKSTSSDLEPSWIGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEP 516
            + D  F D++       +     + D++  W G EKTRPWW  + +D LASLVA+++ +HIENCDLP P
Sbjct:  178 YKDNEFPDFECIDPAPLKNPDKANFDIDAPWKG-EKTRPWWQIADEDQLASLVAERATQHIENCDLPRP 245

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TAIR peptide
Match: AT2G46550.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3). | chr2:19112264-19113037 REVERSE LENGTH=257)

HSP 1 Score: 64.6994 bits (156), Expect = 6.129e-11
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1

Query:  334 YDVTGILVSEQCKSTSSDLEPS--W--IGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDND 573
            Y  TG   S + K +    +PS  W  +  EK  PWW  + KD+LASLVA++SL+++ENCDLP P  +  ++     P G D+D
Sbjct:    7 YGSTGYDESSEKKLSELSFDPSSPWNLLSSEKAAPWWRTTDKDELASLVAQRSLDYVENCDLPTP--QKMKRSYYGSPRGFDSD 88

[Close]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TAIR peptide
Match: AT2G46550.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:19112264-19113457 REVERSE LENGTH=397)

HSP 1 Score: 64.6994 bits (156), Expect = 6.129e-11
Identity = 34/84 (40.48%), Postives = 49/84 (58.33%), Query Frame = 1

Query:  334 YDVTGILVSEQCKSTSSDLEPS--W--IGDEKTRPWWHASGKDDLASLVAKKSLEHIENCDLPEPYIKPFRKIPRHQPTGIDND 573
            Y  TG   S + K +    +PS  W  +  EK  PWW  + KD+LASLVA++SL+++ENCDLP P  +  ++     P G D+D
Sbjct:  147 YGSTGYDESSEKKLSELSFDPSSPWNLLSSEKAAPWWRTTDKDELASLVAQRSLDYVENCDLPTP--QKMKRSYYGSPRGFDSD 228

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3634 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3634 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9I8Z6_POPTR	6.191e-13	41.49	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9SBF3_RICCO	3.397e-11	33.33	Putative uncharacterized protein OS=Ricinus commun...	[more]
Q6Z2A0_ORYSJ	8.367e-10	25.15	Os08g0400300 protein OS=Oryza sativa subsp. japoni...	[more]
D7UCV3_VITVI	1.093e-9	45.45	Whole genome shotgun sequence of line PN40024, sca...	[more]
A2YV04_ORYSI	1.093e-9	25.15	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q9ZPY4_ARATH	9.251e-9	40.48	Expressed protein OS=Arabidopsis thaliana GN=At2g4...	[more]
Q8LFB0_ARATH	9.251e-9	40.48	Putative uncharacterized protein OS=Arabidopsis th...	[more]
Q8L732_ARATH	9.251e-9	40.48	Expressed protein OS=Arabidopsis thaliana GN=At2g4...	[more]
B9DHY8_ARATH	9.251e-9	40.48	AT2G46550 protein (Fragment) OS=Arabidopsis thalia...	[more]
B6TRI4_MAIZE	9.251e-9	42.03	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of Cicer_arietinum_v1_Contig3634 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G46550.2	6.129e-11	40.48	\| Symbols: \| unknown protein; FUNCTIONS IN: molec...	[more]
AT2G46550.1	6.129e-11	40.48	\| Symbols: \| unknown protein; BEST Arabidopsis th...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 220..239 score
None	No IPR available	SEG	seg	seg	coord: 30..43 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3634 ID=Cicer_arietinum_v1_Contig3634; Name=Cicer_arietinum_v1_Contig3634; organism=Cicer arietinum; type=contig; length=745bp
TGATTGGAAGCCAACATAGGGGGTGATGCAAACTATACAACATGTCAACA
TCTAAATTCCTTCGAATCTGAGTTTGATTCTTTTAGTACTAAACTTCATA
GTGACAATGTCAAAAACTTTGATGCTCTTTCATGTGTTGGAAGTGTTGGA
AGTGCTGCTAGTACTACTATAGCTTTAGAGCAGCAATGGAATACTGTGTA
TCCTAAATGTATGAAGAAGAATAATGATAGTAGAATGACGAAAATCGAAG
CTGCGTTGAACAATGAGTTGTATTTAACACCTAAGAAGAAAAATGAAGGC
GAGTTCTGGTTTTCGGATGGTCTTTTTGTGGACTATGATGTTACTGGTAT
TTTGGTTTCTGAACAATGTAAAAGTACATCATCTGATCTTGAACCAAGTT
GGATCGGAGATGAAAAGACTCGGCCGTGGTGGCATGCTTCGGGAAAAGAT
GACTTGGCTTCCTTGGTTGCTAAGAAATCACTTGAGCATATTGAGAATTG
TGATCTACCAGAGCCTTACATTAAGCCTTTTAGGAAAATACCGAGACATC
AGCCGACAGGTATCGACAATGACAAGAATTATGTATCGTCCGATGCGAAC
GATTGTACAACTACAACCCTGACTTCTGGATGTTCATTTCAGGATTCAGA
TAGAATTTTCAGTTCCAGTGAAAACAAAGACTATGATTCAAGCGACAGCA
GCGATATTCGCATGGATTCCGAGAACACGGCCAAGGCAAAGCTAC

Search form

Cicer_arietinum_v1_Contig3634