Cicer_arietinum_v1_Contig3674

Contig Overview


Name	Cicer_arietinum_v1_Contig3674
Unique Name	Cicer_arietinum_v1_Contig3674
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	710

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR915927	EST	GR915927:58..214 +	Cicer arietinum unigene v1	n/a
CV793606	EST	CV793606:1..526 +	Cicer arietinum unigene v1	n/a
GR392838	EST	GR392838:5..710 +	Cicer arietinum unigene v1	n/a
GR406521	EST	GR406521:592..693 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR915927	GR915927	Cicer arietinum	EST
CV793606	CV793606	Cicer arietinum	EST
GR392838	GR392838	Cicer arietinum	EST
GR406521	GR406521	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.596e-23
Identity = 45/62 (72.58%), Postives = 47/62 (75.81%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCGG C +RC L SRP LC RACGTCC RC CVPPGTSGN E C  CY  +TTHGNK KCP
Sbjct:   44 IDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGNKRKCP 104

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.817e-20
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCG  C++RC L  RP LC RACGTCC RC CVPPGT GN + C  CY  +TTHG + KCP
Sbjct:   38 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGRRKCP 98

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.274e-19
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCGG C  RCS  SRPNLC RAC +CC RC CVPPGT+GN  +C  CY  +TT G + KCP
Sbjct:   39 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.642e-19
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCGG C  RCS  SR  LC RAC +CC RC CVPPGTSGN  +C  CY  +TTHG + KCP
Sbjct:   39 IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 3.639e-9
Identity = 27/60 (45.00%), Postives = 31/60 (51.67%), Query Frame = 1

Query:  229 CGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            C   C  RCS     + C + CG CC  CKCVP GT GN+  C  CY D      K+KCP
Sbjct:   30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHEC-PCYRDKKNSKGKSKCP 88

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.081e-8
Identity = 31/90 (34.44%), Postives = 43/90 (47.78%), Query Frame = 1

Query:  139 IEKDEDEELHLSDKPLIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            I +DE ++   +++   V +G    +   DC   C  RCS  S    C   C  CC +C CVP GT GN++ C  CY +  T     KCP
Sbjct:   27 IMRDEQQQQQRNNQLYGVSEGR---LHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSC-PCYNNWKTKRGGPKCP 112

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.024e-8
Identity = 26/65 (40.00%), Postives = 31/65 (47.69%), Query Frame = 1

Query:  214 MQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            ++  DC   C  RCS  S    C   C  CC  C CVP G  GN++ C  CY +  T   K KCP
Sbjct:   33 LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSC-PCYNNWKTQEGKPKCP 96

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 4.449e-7
Identity = 23/60 (38.33%), Postives = 29/60 (48.33%), Query Frame = 1

Query:  229 CGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            C   C  RC        C   C  CC +C CVPPG  GN+++C +CY +  T     KCP
Sbjct:   48 CPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVC-SCYNNWKTQEGGPKCP 106

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: B7FJ32_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.372e-50
Identity = 87/94 (92.55%), Postives = 92/94 (97.87%), Query Frame = 1

Query:  127 SDHEIEKDEDEELHLSDKPLIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            SDHEIEK+EDEE+HL+DKPLIVRDGNRRLMQDIDCGGLC SRCS+HSRPNLCKRACGTCCVRCKCVPPGT+GNRE CGACYTDMTTHGNKTKCP
Sbjct:   22 SDHEIEKEEDEEMHLTDKPLIVRDGNRRLMQDIDCGGLCRSRCSVHSRPNLCKRACGTCCVRCKCVPPGTAGNREFCGACYTDMTTHGNKTKCP 115

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: B4UWC2_ARAHY (Gonadotropin beta chain OS=Arachis hypogaea PE=4 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.517e-42
Identity = 77/92 (83.70%), Postives = 85/92 (92.39%), Query Frame = 1

Query:  136 EIEKDEDEELHL-SDKPLIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            +IE ++DE+L L +DKPLIVRD NRRLMQDIDCGGLC  RCSLHSRPNLC RACGTCCVRCKCVPPGT+GNRE+CG+CYTDMTTHGNKTKCP
Sbjct:    3 KIEDEDDEQLSLPADKPLIVRDSNRRLMQDIDCGGLCKERCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNKTKCP 94

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: C6SVF3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.737e-41
Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 1

Query:  154 DEELHLSD-KPLIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            +EELH  D +PLIVRDGNRRLMQDIDCGGLC +RCS HSRPNLC RACGTCCVRCKCVPPGTSGNRE+CG CYTDMTTHGNKTKCP
Sbjct:   32 EEELHFPDNEPLIVRDGNRRLMQDIDCGGLCKTRCSAHSRPNLCTRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 117

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: C6SYY5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.047e-40
Identity = 74/94 (78.72%), Postives = 79/94 (84.04%), Query Frame = 1

Query:  127 SDHEIEKDEDEELHLSDKPLIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            SD  IEK++DEE       LIVR GNRRLMQDIDCGGLC +R S HSRPN+C RACGTCCVRCKCVPPGTSGNRE+CG CYTDMTTHGNKTKCP
Sbjct:   22 SDVNIEKEQDEEFRFPVDHLIVRGGNRRLMQDIDCGGLCKTRYSAHSRPNVCNRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 115

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: A9PAA8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814282 PE=4 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.051e-38
Identity = 68/75 (90.67%), Postives = 70/75 (93.33%), Query Frame = 1

Query:  184 LIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            L+VR GNRRLMQDIDCGGLC  RCSLHSRPNLC RACGTCCVRCKCVPPGTSGNRE+CG CYTDMTTHGNKTKCP
Sbjct:   35 LVVRGGNRRLMQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTSGNREVCGTCYTDMTTHGNKTKCP 109

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: B9IEM1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_733223 PE=4 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.469e-37
Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 1

Query:  184 LIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            L+VR GNRRLMQDIDCGGLC  RCSLHSRPN+C RACGTCCVRCKCVPPGTSGNRE+CG CYTDMTTHGNKTKCP
Sbjct:   35 LVVRGGNRRLMQDIDCGGLCKQRCSLHSRPNVCTRACGTCCVRCKCVPPGTSGNREVCGTCYTDMTTHGNKTKCP 109

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: D7SHX3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007817001 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.584e-37
Identity = 69/86 (80.23%), Postives = 75/86 (87.21%), Query Frame = 1

Query:  151 EDEELHLSDKPLIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            E EE+    + ++VR GNRRLMQDIDCGGLC  RCSLHSRPN+C RACGTCCVRCKCVPPGTSGNRE+CG CYTDMTTHGNKTKCP
Sbjct:   27 EGEEMPFVSQ-VVVRGGNRRLMQDIDCGGLCKDRCSLHSRPNVCVRACGTCCVRCKCVPPGTSGNRELCGKCYTDMTTHGNKTKCP 111

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: B9RB78_RICCO (Gibberellin-regulated protein 1, putative OS=Ricinus communis GN=RCOM_1512220 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.164e-34
Identity = 63/73 (86.30%), Postives = 66/73 (90.41%), Query Frame = 1

Query:  190 VRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            VR GNRRLMQ+IDCGGLC  RCSLHSRPN C RACGTCC RCKCVPPGTSGNRE+CG CYT+MTTHGNKTKCP
Sbjct:   18 VRGGNRRLMQEIDCGGLCKVRCSLHSRPNTCNRACGTCCERCKCVPPGTSGNREVCGKCYTEMTTHGNKTKCP 90

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: B9S2K0_RICCO (Gibberellin-regulated protein 3, putative OS=Ricinus communis GN=RCOM_0699940 PE=4 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.171e-32
Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 1

Query:  187 IVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            +V+  NRRL+  +DCGGLC  RCSLHSRPN+C RACGTCC RCKCVPPGTSGNR++CG CYTDMTTHGNKTKCP
Sbjct:   32 LVKGANRRLLPFMDCGGLCKVRCSLHSRPNVCTRACGTCCYRCKCVPPGTSGNRDVCGKCYTDMTTHGNKTKCP 105

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Match: D7TNM7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020178001 PE=4 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.272e-30
Identity = 57/91 (62.64%), Postives = 65/91 (71.43%), Query Frame = 1

Query:  136 EIEKDEDEELHLSDKPLIVRDGNRRLMQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            E   D++          +     RRL+  +DCGGLC  RCSLHSRPN+C RACGTCCVRCKCVPPGT GNRE+CG CYT+MTTHGNK KCP
Sbjct:   18 EASSDDNNIFEHQHNQAVKGSAGRRLLPFLDCGGLCKERCSLHSRPNVCTRACGTCCVRCKCVPPGTYGNREMCGTCYTEMTTHGNKPKCP 108

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT5G14920.1 (| Symbols: | Gibberellin-regulated family protein | chr5:4826598-4827761 FORWARD LENGTH=275)

HSP 1 Score: 100.908 bits (250), Expect = 7.174e-22
Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDC  LC +RC  HSR N+C RAC TCC RCKCVPPGT GN+E CG+CY +M T G K+KCP
Sbjct:  214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSKCP 275

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT1G75750.2 (| Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28441813-28442284 REVERSE LENGTH=97)

HSP 1 Score: 97.4413 bits (241), Expect = 7.932e-21
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCG  C++RC L  RP LC RACGTCC RC CVPPGT GN + C  CY  +TTHG + KCP
Sbjct:   37 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGRRKCP 97

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT1G75750.1 (| Symbols: GASA1 | GAST1 protein homolog 1 | chr1:28441813-28442284 REVERSE LENGTH=98)

HSP 1 Score: 97.4413 bits (241), Expect = 7.932e-21
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCG  C++RC L  RP LC RACGTCC RC CVPPGT GN + C  CY  +TTHG + KCP
Sbjct:   38 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGRRKCP 98

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT2G18420.1 (| Symbols: | Gibberellin-regulated family protein | chr2:7993861-7994334 FORWARD LENGTH=94)

HSP 1 Score: 97.0561 bits (240), Expect = 1.036e-20
Identity = 41/62 (66.13%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDC   C  RCSL SRPNLC RACGTCC RC CV PGTSGN + C  CY  +TTHG + KCP
Sbjct:   34 IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRKCP 94

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT4G09600.1 (| Symbols: GASA3 | GAST1 protein homolog 3 | chr4:6073014-6073516 REVERSE LENGTH=99)

HSP 1 Score: 95.9005 bits (237), Expect = 2.308e-20
Identity = 39/62 (62.90%), Postives = 44/62 (70.97%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCGG C  RCS  SRPNLC RAC +CC RC CVPPGT+GN  +C  CY  +TT G + KCP
Sbjct:   39 IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT4G09610.1 (| Symbols: GASA2 | GAST1 protein homolog 2 | chr4:6074927-6075573 REVERSE LENGTH=99)

HSP 1 Score: 93.9745 bits (232), Expect = 8.770e-20
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            IDCGG C  RCS  SR  LC RAC +CC RC CVPPGTSGN  +C  CY  +TTHG + KCP
Sbjct:   39 IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT1G22690.3 (| Symbols: | Gibberellin-regulated family protein | chr1:8027328-8027961 FORWARD LENGTH=119)

HSP 1 Score: 90.1225 bits (222), Expect = 1.266e-18
Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            I+CG  C  RCS  SR  +C RACG+CC +C+CVPPGTSGN   C  CY  + THGNK KCP
Sbjct:   59 INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT1G22690.2 (| Symbols: | Gibberellin-regulated family protein | chr1:8027328-8027961 FORWARD LENGTH=119)

HSP 1 Score: 90.1225 bits (222), Expect = 1.266e-18
Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            I+CG  C  RCS  SR  +C RACG+CC +C+CVPPGTSGN   C  CY  + THGNK KCP
Sbjct:   59 INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT1G22690.1 (| Symbols: | Gibberellin-regulated family protein | chr1:8027328-8027961 FORWARD LENGTH=119)

HSP 1 Score: 90.1225 bits (222), Expect = 1.266e-18
Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 1

Query:  223 IDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            I+CG  C  RCS  SR  +C RACG+CC +C+CVPPGTSGN   C  CY  + THGNK KCP
Sbjct:   59 INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

[Close]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Match: AT1G74670.1 (| Symbols: | Gibberellin-regulated family protein | chr1:28053378-28053893 FORWARD LENGTH=101)

HSP 1 Score: 65.0846 bits (157), Expect = 4.363e-11
Identity = 27/65 (41.54%), Postives = 34/65 (52.31%), Query Frame = 1

Query:  214 MQDIDCGGLCISRCSLHSRPNLCKRACGTCCVRCKCVPPGTSGNREICGACYTDMTTHGNKTKCP 408
            ++   CGG C  RCS       C   C  CC +C CVPPGT GN+++C  CY +  T     KCP
Sbjct:   38 LKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVC-PCYNNWKTQQGGPKCP 101

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3674 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
SNAK2_SOLTU	2.596e-23	72.58	Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1	[more]
GASA1_ARATH	7.817e-20	62.90	Gibberellin-regulated protein 1 OS=Arabidopsis tha...	[more]
GASA3_ARATH	2.274e-19	62.90	Gibberellin-regulated protein 3 OS=Arabidopsis tha...	[more]
GASA2_ARATH	8.642e-19	62.90	Gibberellin-regulated protein 2 OS=Arabidopsis tha...	[more]
SNAK1_SOLTU	3.639e-9	45.00	Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1	[more]
GAST1_SOLLC	3.081e-8	34.44	Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=...	[more]
RSI1_SOLLC	4.024e-8	40.00	Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=...	[more]
GASA4_ARATH	4.449e-7	38.33	Gibberellin-regulated protein 4 OS=Arabidopsis tha...	[more]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FJ32_MEDTR	3.372e-50	92.55	Putative uncharacterized protein OS=Medicago trunc...	[more]
B4UWC2_ARAHY	1.517e-42	83.70	Gonadotropin beta chain OS=Arachis hypogaea PE=4 S...	[more]
C6SVF3_SOYBN	3.737e-41	87.21	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SYY5_SOYBN	7.047e-40	78.72	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PAA8_POPTR	5.051e-38	90.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9IEM1_POPTR	1.469e-37	89.33	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7SHX3_VITVI	5.584e-37	80.23	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9RB78_RICCO	1.164e-34	86.30	Gibberellin-regulated protein 1, putative OS=Ricin...	[more]
B9S2K0_RICCO	3.171e-32	78.38	Gibberellin-regulated protein 3, putative OS=Ricin...	[more]
D7TNM7_VITVI	2.272e-30	62.64	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of Cicer_arietinum_v1_Contig3674 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G14920.1	7.174e-22	66.13	\| Symbols: \| Gibberellin-regulated family protein...	[more]
AT1G75750.2	7.932e-21	62.90	\| Symbols: GASA1 \| GAST1 protein homolog 1 \| chr1:...	[more]
AT1G75750.1	7.932e-21	62.90	\| Symbols: GASA1 \| GAST1 protein homolog 1 \| chr1:...	[more]
AT2G18420.1	1.036e-20	66.13	\| Symbols: \| Gibberellin-regulated family protein...	[more]
AT4G09600.1	2.308e-20	62.90	\| Symbols: GASA3 \| GAST1 protein homolog 3 \| chr4:...	[more]
AT4G09610.1	8.770e-20	62.90	\| Symbols: GASA2 \| GAST1 protein homolog 2 \| chr4:...	[more]
AT1G22690.3	1.266e-18	59.68	\| Symbols: \| Gibberellin-regulated family protein...	[more]
AT1G22690.2	1.266e-18	59.68	\| Symbols: \| Gibberellin-regulated family protein...	[more]
AT1G22690.1	1.266e-18	59.68	\| Symbols: \| Gibberellin-regulated family protein...	[more]
AT1G74670.1	4.363e-11	41.54	\| Symbols: \| Gibberellin-regulated family protein...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 24..127 score: 7.9
None	No IPR available	SEG	seg	seg	coord: 15..33 score
None	No IPR available	SEG	seg	seg	coord: 22..37 score
None	No IPR available	SEG	seg	seg	coord: 61..77 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3674 ID=Cicer_arietinum_v1_Contig3674; Name=Cicer_arietinum_v1_Contig3674; organism=Cicer arietinum; type=contig; length=710bp
GACTCATCAACTTAACGTGCTGTCTAATCTTTATCGAAGTTCCTTTCTAG
AATTTCCTCTGTTATGGCATTACGCAAGCTTCTTGGGATGGGGTTGTTGC
TTCTAGTGTGCCTCTCTAAGGTTTCATCTGATCATGAGATAGAAAAGGAT
GAAGACGAAGAACTACACTTATCTGATAAGCCGCTTATTGTGCGAGACGG
GAACAGAAGGCTGATGCAAGATATAGATTGTGGAGGATTGTGCATTTCGA
GGTGCAGTTTGCATTCAAGGCCCAACTTGTGCAAAAGGGCCTGTGGGACT
TGTTGTGTGAGGTGTAAATGCGTTCCACCTGGCACCTCTGGCAATAGGGA
GATTTGTGGGGCTTGTTACACTGATATGACCACCCATGGCAACAAGACCA
AGTGTCCTTAATTAGACAGCTTTTTAAAGCCCAGATGTCATGGGCCCAAT
TGGTTTGGGCTCCTTAACTTCCAAGCCCTACTTTGTTCCCAACTAGTGTA
GTTCAGTAAATGGTGTGTGTTTGGATAAGAAAAAAACGAGGTATTTATGT
TGTTGTTGTTGTTGGCTGTTGCTATAGTAGTAGTAGTATGTACGTACACC
TTTGTATTCCTAGGCTTTTGACATAGGTGTGTTCTTGTTATTTTATTTTT
TTATTGTCTATTACGGTAGATAGATATGAAATGAAATGAATGCATAAACT
TGTTTGTGTG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003854	GASA

Search form

Cicer_arietinum_v1_Contig3674