Cicer_arietinum_v1_Contig3676

Contig Overview
NameCicer_arietinum_v1_Contig3676
Unique NameCicer_arietinum_v1_Contig3676
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length393
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CD051359ESTCD051359:1..393 +
FL519012ESTFL519012:3..391 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CD051359CD051359Cicer arietinumEST
FL519012FL519012Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. SwissProt
Match: NAGC_SHIFL (N-acetylglucosamine repressor OS=Shigella flexneri GN=nagC PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.122e-45
Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+DLS+K LAE+HY LPERTQ+TLE+AL  AI QFI+  QRK+RELIAISVILPGLVDP+ G + YMPHI V  W LV+ LE RFKVT FVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. SwissProt
Match: NAGC_ECOLI (N-acetylglucosamine repressor OS=Escherichia coli (strain K12) GN=nagC PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.122e-45
Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+DLS+K LAE+HY LPERTQ+TLE+AL  AI QFI+  QRK+RELIAISVILPGLVDP+ G + YMPHI V  W LV+ LE RFKVT FVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. SwissProt
Match: NAGC_ECOL6 (N-acetylglucosamine repressor OS=Escherichia coli O6 GN=nagC PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.122e-45
Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+DLS+K LAE+HY LPERTQ+TLE+AL  AI QFI+  QRK+RELIAISVILPGLVDP+ G + YMPHI V  W LV+ LE RFKVT FVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. SwissProt
Match: NAGC_ECO57 (N-acetylglucosamine repressor OS=Escherichia coli O157:H7 GN=nagC PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.122e-45
Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+DLS+K LAE+HY LPERTQ+TLE+AL  AI QFI+  QRK+RELIAISVILPGLVDP+ G + YMPHI V  W LV+ LE RFKVT FVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. SwissProt
Match: MLC_ECOLI (Protein mlc OS=Escherichia coli (strain K12) GN=mlc PE=1 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 8.351e-10
Identity = 37/118 (31.36%), Postives = 61/118 (51.69%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMP-HISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            +R+ R +  + L DLS+K + E+   L  +    L + +   I QF   +Q+K+  L +I++ LPG++D   GIV  MP +  V    L + LE    V  ++ HDI +  +AE   G
Sbjct:   90 LRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: C4UM17_YERRU (N-acetylglucosamine repressor OS=Yersinia ruckeri ATCC 29473 GN=yruck0001_20540 PE=4 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.682e-48
Identity = 96/117 (82.05%), Postives = 104/117 (88.89%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            +RLGRHDATITLYD+S KSL E+HYALPERTQETLE+ALF  I QFIE  QRK+RELIAI+VILPGLV+PNKGIVRYMPHISV  W LVD L+ARF VTSFVGHDIRSLALAEHY G
Sbjct:   91 IRLGRHDATITLYDMSGKSLGEEHYALPERTQETLEHALFTIINQFIEQFQRKLRELIAIAVILPGLVEPNKGIVRYMPHISVNNWPLVDNLQARFNVTSFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: D4E9N9_SEROD (N-acetylglucosamine repressor OS=Serratia odorifera DSM 4582 GN=nagC2 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.090e-47
Identity = 96/117 (82.05%), Postives = 101/117 (86.32%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITLYD+S KSL E+HY LPERTQETLENALF AI QFIE  QRK+RELIAISVILPGLVDP  G+VRYMPHISV  W LVD L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLYDMSGKSLGEEHYPLPERTQETLENALFNAIAQFIESYQRKLRELIAISVILPGLVDPALGVVRYMPHISVNHWALVDNLQQRFNVTSFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: D1RWE2_SEROD (Transcriptional repressor OS=Serratia odorifera 4Rx13 GN=SOD_e03590 PE=4 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.429e-47
Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITLYD+S KSL E+HY LPERTQETLENALF AI QFIE  QRK+RELIAI+VILPGLVDP  G+VRYMPHISV  W LVD L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLYDMSGKSLGEEHYPLPERTQETLENALFNAIAQFIESYQRKLRELIAIAVILPGLVDPALGVVRYMPHISVNHWPLVDNLQQRFNVTSFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: A8GB39_SERP5 (ROK family protein OS=Serratia proteamaculans (strain 568) GN=Spro_1225 PE=4 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 7.068e-47
Identity = 95/117 (81.20%), Postives = 101/117 (86.32%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITLYD+S KSL E+HY LPERTQETLENALF AI QFIE  QRK+RELIAI+VILPGLVDP  G+VRYMPHISV  W LVD L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLYDMSGKSLGEEHYPLPERTQETLENALFIAIAQFIENYQRKLRELIAIAVILPGLVDPALGVVRYMPHISVNNWALVDNLQQRFNVTSFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: C4UX97_YERRO (N-acetylglucosamine repressor OS=Yersinia rohdei ATCC 43380 GN=yrohd0001_30 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.575e-46
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+D+S KSL E+HYALPERTQETLE ALF  I QFIE  QRK+RELIAI+VILPGLV+P+KGIVRYMPHISV  W LV+ L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLFDMSGKSLGEEHYALPERTQETLEYALFNVISQFIEAYQRKLRELIAIAVILPGLVEPSKGIVRYMPHISVSNWPLVENLQNRFNVTSFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: C4SV71_YERFR (N-acetylglucosamine repressor OS=Yersinia frederiksenii ATCC 33641 GN=yfred0001_12330 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.575e-46
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+D+S KSL E+HYALPERTQETLE ALF  I QFIE  QRK+RELIAI+VILPGLV+P+KGIVRYMPHISV  W LV+ L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLFDMSGKSLGEEHYALPERTQETLEYALFNVISQFIEAYQRKLRELIAIAVILPGLVEPSKGIVRYMPHISVSNWPLVENLQNRFNVTSFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: C4S4B6_YERBE (N-acetylglucosamine repressor OS=Yersinia bercovieri ATCC 43970 GN=yberc0001_15480 PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.575e-46
Identity = 92/117 (78.63%), Postives = 103/117 (88.03%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+D+S KSL E+HY+LPERTQETLE+ALF  I QFIE  QRK+RELIAI+VILPGLV+P+KGIVRYMPHISV  W LV+ L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   91 VRLGRHDATITLFDMSGKSLGEEHYSLPERTQETLEHALFNIISQFIEAYQRKLRELIAIAVILPGLVEPSKGIVRYMPHISVSNWPLVENLQKRFNVTSFVGHDIRSLALAEHYFG 207
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: A1JQF0_YERE8 (Putative N-acetylglucosamine regulatory protein OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=nagC PE=4 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.057e-46
Identity = 92/117 (78.63%), Postives = 103/117 (88.03%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+D+S KSL E+HY+LPERTQETLE+ALF  I QFIE  QRK+RELIAI+VILPGLV+P+KGIVRYMPHISV  W LV+ L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   92 VRLGRHDATITLFDMSGKSLGEEHYSLPERTQETLEHALFNIISQFIEAYQRKLRELIAIAVILPGLVEPSKGIVRYMPHISVSNWPLVENLQNRFNVTSFVGHDIRSLALAEHYFG 208
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: C4U6T2_YERAL (N-acetylglucosamine repressor OS=Yersinia aldovae ATCC 35236 GN=yaldo0001_8920 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.508e-46
Identity = 92/117 (78.63%), Postives = 102/117 (87.18%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+D+S KSL E+HYALPERTQETLE+ALF  I QFIE  QRK+ ELIAI+VILPGLV+P+KGIVRYMPHISV  W LV+ L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   80 VRLGRHDATITLFDMSGKSLGEEHYALPERTQETLEHALFNIISQFIEAYQRKLNELIAIAVILPGLVEPSKGIVRYMPHISVNNWPLVENLQNRFNVTSFVGHDIRSLALAEHYFG 196
[Close]
BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Match: C4SE30_YERMO (N-acetylglucosamine repressor OS=Yersinia mollaretii ATCC 43969 GN=ymoll0001_12910 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.581e-46
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = -2 
Query:   18 VRLGRHDATITLYDLSAKSLAEQHYALPERTQETLENALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDTLEARFKVTSFVGHDIRSLALAEHYLG 368
            VRLGRHDATITL+D+S KSL E+HY+LPERTQETLE+ALF  I QFI+  QRK+RELIAI+VILPGLV+P+KGIVRYMPHISV  W LV+ L+ RF VTSFVGHDIRSLALAEHY G
Sbjct:   77 VRLGRHDATITLFDMSGKSLGEEHYSLPERTQETLEHALFNIISQFIDTYQRKLRELIAIAVILPGLVEPHKGIVRYMPHISVSNWPLVENLQNRFNVTSFVGHDIRSLALAEHYFG 193
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig3676 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
NAGC_SHIFL6.122e-4576.07N-acetylglucosamine repressor OS=Shigella flexneri... [more]
NAGC_ECOLI6.122e-4576.07N-acetylglucosamine repressor OS=Escherichia coli ... [more]
NAGC_ECOL66.122e-4576.07N-acetylglucosamine repressor OS=Escherichia coli ... [more]
NAGC_ECO576.122e-4576.07N-acetylglucosamine repressor OS=Escherichia coli ... [more]
MLC_ECOLI8.351e-1031.36Protein mlc OS=Escherichia coli (strain K12) GN=ml... [more]
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BLAST of Cicer_arietinum_v1_Contig3676 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C4UM17_YERRU1.682e-4882.05N-acetylglucosamine repressor OS=Yersinia ruckeri ... [more]
D4E9N9_SEROD1.090e-4782.05N-acetylglucosamine repressor OS=Serratia odorifer... [more]
D1RWE2_SEROD2.429e-4781.20Transcriptional repressor OS=Serratia odorifera 4R... [more]
A8GB39_SERP57.068e-4781.20ROK family protein OS=Serratia proteamaculans (str... [more]
C4UX97_YERRO1.575e-4679.49N-acetylglucosamine repressor OS=Yersinia rohdei A... [more]
C4SV71_YERFR1.575e-4679.49N-acetylglucosamine repressor OS=Yersinia frederik... [more]
C4S4B6_YERBE1.575e-4678.63N-acetylglucosamine repressor OS=Yersinia bercovie... [more]
A1JQF0_YERE82.057e-4678.63Putative N-acetylglucosamine regulatory protein OS... [more]
C4U6T2_YERAL3.508e-4678.63N-acetylglucosamine repressor OS=Yersinia aldovae ... [more]
C4SE30_YERMO4.581e-4677.78N-acetylglucosamine repressor OS=Yersinia mollaret... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000600ROKPFAMPF00480ROKcoord: 9..126
score: 4.2
NoneNo IPR availableGENE3D3.30.420.40no descriptioncoord: 9..127
score: 1.3
NoneNo IPR availablePANTHERPTHR18964ROK FAMILYcoord: 71..125
score: 5.9
NoneNo IPR availablePANTHERPTHR18964:SF26ROK FAMILY TRANSCRIPTIONAL REPRESSORcoord: 71..125
score: 5.9
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 9..128
score: 6.5

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig3676 ID=Cicer_arietinum_v1_Contig3676; Name=Cicer_arietinum_v1_Contig3676; organism=Cicer arietinum; type=contig; length=393bp
GGCTTAGCGTGGTCGCGGCCGAGGTAGTGTTCGGCAAGCGCCAGACTGCG
GATATCGTGGCCGACAAAACTGGTGACTTTAAACCGGGCTTCCAGCGTAT
CGACTAATTTCCACGCGCCCACGCTGATATGCGGCATATAGCGCACGATG
CCTTTATTCGGATCGACCAGCCCCGGAAGGATGACGGAAATGGCAATCAG
TTCGCGGATTTTGCGCTGATTTAGTTCAATGAATTGCTGTATAGCCTCGA
ACAGCGCGTTCTCCAGGGTTTCCTGAGTGCGTTCGGGCAGGGCGTAATGT
TGTTCGGCCAGCGATTTTGCGCTGAGATCATAAAGCGTTATCGTCGCATC
ATGGCGACCAAGACGTACCTGCCCGGGCGGCCGCTCGAAAGCC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR000600ROK