Cicer_arietinum_v1_Contig3708

Contig Overview
NameCicer_arietinum_v1_Contig3708
Unique NameCicer_arietinum_v1_Contig3708
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length180
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CK148647ESTCK148647:1..131 -Cicer arietinum unigene v1n/a
CK149075ESTCK149075:1..123 +Cicer arietinum unigene v1n/a
CK149061ESTCK149061:1..176 +Cicer arietinum unigene v1n/a
CK149035ESTCK149035:1..176 +Cicer arietinum unigene v1n/a
CK149027ESTCK149027:1..181 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
CK148647CK148647Cicer arietinumEST
CK149075CK149075Cicer arietinumEST
CK149061CK149061Cicer arietinumEST
CK149035CK149035Cicer arietinumEST
CK149027CK149027Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: B9I386_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_834327 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.879e-19
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMGSA+LQIQT +G I MPNN+CCVVVEYL GG
Sbjct:  131 VAVWHKLDHPNVTKFIGATMGSADLQIQTANGQIGMPNNICCVVVEYLPGG 181
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: B9IEQ1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_835158 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.373e-19
Identity = 44/51 (86.27%), Postives = 47/51 (92.16%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMG A+LQIQT +G I MPNN+CCVVVEYLAGG
Sbjct:  130 VAVWHKLDHPNVTKFIGATMGLADLQIQTANGQIGMPNNICCVVVEYLAGG 180
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: D7SHT8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007775001 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.420e-18
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMGSAEL IQT++G I MP+N+CCVVVEYL GG
Sbjct:   99 VAVWHKLDHPNVTKFIGATMGSAELNIQTENGHIGMPSNICCVVVEYLPGG 149
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: A5ANZ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010542 PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.420e-18
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMGSAEL IQT++G I MP+N+CCVVVEYL GG
Sbjct:  131 VAVWHKLDHPNVTKFIGATMGSAELNIQTENGHIGMPSNICCVVVEYLPGG 181
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: B9RB44_RICCO (Protein kinase atmrk1, putative OS=Ricinus communis GN=RCOM_1511180 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.854e-18
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            V VWHKLDHPNVTKFIGATMGS+ELQIQT++G I MP+N+CCV+VEYL GG
Sbjct:  143 VVVWHKLDHPNVTKFIGATMGSSELQIQTENGYIGMPSNICCVIVEYLPGG 193
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: Q9FGB1_ARATH (Protein kinase OS=Arabidopsis thaliana GN=At5g50000 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.163e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMG++ LQ+QT+SG ++MPNN+CCVVVEYL GG
Sbjct:  135 VAVWHKLDHPNVTKFIGATMGASGLQLQTESGPLAMPNNICCVVVEYLPGG 185
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: Q8LES3_ARATH (Protein kinase OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.163e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMG++ LQ+QT+SG ++MPNN+CCVVVEYL GG
Sbjct:  135 VAVWHKLDHPNVTKFIGATMGASGLQLQTESGPLAMPNNICCVVVEYLPGG 185
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: D7MPH5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_918001 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.163e-18
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMG++ LQ+QT+SG ++MPNN+CCVVVEYL GG
Sbjct:  135 VAVWHKLDHPNVTKFIGATMGASGLQLQTESGPLAMPNNICCVVVEYLPGG 185
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: B9RUU3_RICCO (Protein kinase atmrk1, putative OS=Ricinus communis GN=RCOM_0850700 PE=4 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.202e-18
Identity = 43/59 (72.88%), Postives = 49/59 (83.05%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGGTCPGGRSK 177
            VAVWHKLDHPNVTKFIGATMGS++L IQT++G I MP+N+CCVVVEY     CPGG  K
Sbjct:  135 VAVWHKLDHPNVTKFIGATMGSSDLHIQTENGHIGMPSNICCVVVEY-----CPGGALK 188
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Match: Q84PB0_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.202e-17
Identity = 40/55 (72.73%), Postives = 49/55 (89.09%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGGTCPG 165
            V+VWHKLDHPNVTKFIGA MG+ +L IQT+SG ++MP+N+CCVVVEYLAGG+  G
Sbjct:  130 VSVWHKLDHPNVTKFIGAIMGARDLDIQTESGHLAMPSNICCVVVEYLAGGSLKG 184
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TAIR peptide
Match: AT5G50000.1 (| Symbols: | Protein kinase superfamily protein | chr5:20342838-20345033 REVERSE LENGTH=385)

HSP 1 Score: 94.7449 bits (234), Expect = 1.203e-20
Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGG 153
            VAVWHKLDHPNVTKFIGATMG++ LQ+QT+SG ++MPNN+CCVVVEYL GG
Sbjct:  135 VAVWHKLDHPNVTKFIGATMGASGLQLQTESGPLAMPNNICCVVVEYLPGG 185
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TAIR peptide
Match: AT3G01490.1 (| Symbols: | Protein kinase superfamily protein | chr3:191095-193258 REVERSE LENGTH=411)

HSP 1 Score: 90.1225 bits (222), Expect = 2.964e-19
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGGTCPGGRSK 177
            VAVWHKLDHPNVTKFIGA MG++E+ IQT++G + MP+NVCCVVVEY     CPGG  K
Sbjct:  161 VAVWHKLDHPNVTKFIGAAMGTSEMSIQTENGQMGMPSNVCCVVVEY-----CPGGALK 214
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TAIR peptide
Match: AT4G14780.1 (| Symbols: | Protein kinase superfamily protein | chr4:8492989-8494480 FORWARD LENGTH=364)

HSP 1 Score: 74.3294 bits (181), Expect = 1.683e-14
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGLISMPNNVCCVVVEYLAGGT 156
            V VWHKL+HPNVTKF+GA+MG+  L I++     S+P   CCVVVEYL GGT
Sbjct:  114 VTVWHKLNHPNVTKFVGASMGTTNLNIRSADSKGSLPQQACCVVVEYLPGGT 165
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TAIR peptide
Match: AT3G22750.1 (| Symbols: | Protein kinase superfamily protein | chr3:8037364-8039096 REVERSE LENGTH=378)

HSP 1 Score: 73.559 bits (179), Expect = 2.871e-14
Identity = 33/53 (62.26%), Postives = 42/53 (79.25%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQTDSGL-ISMPNNVCCVVVEYLAGGT 156
            VAVWHKLDHPNVT+F+GA+MG+A L+I + +    S+P   CCVVVEY+ GGT
Sbjct:  127 VAVWHKLDHPNVTRFVGASMGTANLKIPSSAETENSLPQRACCVVVEYIPGGT 179
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TAIR peptide
Match: AT3G63260.2 (| Symbols: ATMRK1 | Protein kinase superfamily protein | chr3:23373327-23374747 REVERSE LENGTH=344)

HSP 1 Score: 68.1662 bits (165), Expect = 1.206e-12
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQT-----DSGLISMPNNVCCVVVEYLAGGT 156
            VAVW KLDHPNVTKFIGA+MG+++L+I         G  + P   CCVVVEY+AGGT
Sbjct:  136 VAVWQKLDHPNVTKFIGASMGTSDLRIPPAGDTGGRGNGAHPARACCVVVEYVAGGT 192
[Close]
BLAST of Cicer_arietinum_v1_Contig3708 vs. TAIR peptide
Match: AT3G63260.1 (| Symbols: ATMRK1 | Protein kinase superfamily protein | chr3:23373090-23374747 REVERSE LENGTH=391)

HSP 1 Score: 68.1662 bits (165), Expect = 1.206e-12
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 1 
Query:    1 VAVWHKLDHPNVTKFIGATMGSAELQIQT-----DSGLISMPNNVCCVVVEYLAGGT 156
            VAVW KLDHPNVTKFIGA+MG+++L+I         G  + P   CCVVVEY+AGGT
Sbjct:  136 VAVWQKLDHPNVTKFIGASMGTSDLRIPPAGDTGGRGNGAHPARACCVVVEYVAGGT 192
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig3708 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9I386_POPTR4.879e-1986.27Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9IEQ1_POPTR6.373e-1986.27Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SHT8_VITVI1.420e-1884.31Whole genome shotgun sequence of line PN40024, sca... [more]
A5ANZ4_VITVI1.420e-1884.31Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RB44_RICCO1.854e-1880.39Protein kinase atmrk1, putative OS=Ricinus communi... [more]
Q9FGB1_ARATH3.163e-1880.39Protein kinase OS=Arabidopsis thaliana GN=At5g5000... [more]
Q8LES3_ARATH3.163e-1880.39Protein kinase OS=Arabidopsis thaliana PE=2 SV=1[more]
D7MPH5_ARALY3.163e-1880.39Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9RUU3_RICCO9.202e-1872.88Protein kinase atmrk1, putative OS=Ricinus communi... [more]
Q84PB0_ORYSJ1.202e-1772.73Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of Cicer_arietinum_v1_Contig3708 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6
Match NameE-valueIdentityDescription
AT5G50000.11.203e-2080.39| Symbols: | Protein kinase superfamily protein |... [more]
AT3G01490.12.964e-1969.49| Symbols: | Protein kinase superfamily protein |... [more]
AT4G14780.11.683e-1461.54| Symbols: | Protein kinase superfamily protein |... [more]
AT3G22750.12.871e-1462.26| Symbols: | Protein kinase superfamily protein |... [more]
AT3G63260.21.206e-1259.65| Symbols: ATMRK1 | Protein kinase superfamily pro... [more]
AT3G63260.11.206e-1259.65| Symbols: ATMRK1 | Protein kinase superfamily pro... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015783Serine/threonine protein kinase-like, ATMRKPANTHERPTHR23257:SF82PROTEIN KINASE ATMRK1coord: 1..52
score: 7.2
NoneNo IPR availablePANTHERPTHR23257SERINE-THREONINE PROTEIN KINASEcoord: 1..52
score: 7.2

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig3708 ID=Cicer_arietinum_v1_Contig3708; Name=Cicer_arietinum_v1_Contig3708; organism=Cicer arietinum; type=contig; length=180bp
GTTGCTGTTTGGCATAAACTTGATCATCCCAATGTCACTAAGTTTATAGG
GGCAACAATGGGATCTGCAGAATTGCAGATTCAAACTGATAGTGGCCTAA
TTAGCATGCCAAACAATGTCTGTTGTGTTGTTGTGGAGTATCTTGCTGGA
GGTACCTGCCCGGGCGGCCGCTCGAAAGGC
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR015783Ser/Thr/Tyr_kinase_HT1_plant