Cicer_arietinum_v1_Contig3709

Contig Overview


Name	Cicer_arietinum_v1_Contig3709
Unique Name	Cicer_arietinum_v1_Contig3709
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	444

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HO214320	EST	HO214320:2..225 +	Cicer arietinum unigene v1	n/a
CK149066	EST	CK149066:55..299 +	Cicer arietinum unigene v1	n/a
GR406393	EST	GR406393:9..420 -	Cicer arietinum unigene v1	n/a
CK149003	EST	CK149003:1..433 +	Cicer arietinum unigene v1	n/a
CK149078	EST	CK149078:4..432 +	Cicer arietinum unigene v1	n/a
CK148940	EST	CK148940:2..432 +	Cicer arietinum unigene v1	n/a
CK148938	EST	CK148938:1..433 +	Cicer arietinum unigene v1	n/a
CK148964	EST	CK148964:2..432 +	Cicer arietinum unigene v1	n/a
CK148946	EST	CK148946:1..432 +	Cicer arietinum unigene v1	n/a
CK148696	EST	CK148696:2..447 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO214320	HO214320	Cicer arietinum	EST
CK149066	CK149066	Cicer arietinum	EST
GR406393	GR406393	Cicer arietinum	EST
CK149003	CK149003	Cicer arietinum	EST
CK149078	CK149078	Cicer arietinum	EST
CK148940	CK148940	Cicer arietinum	EST
CK148938	CK148938	Cicer arietinum	EST
CK148964	CK148964	Cicer arietinum	EST
CK148946	CK148946	Cicer arietinum	EST
CK148696	CK148696	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: CX5C1_ARATH (Probable cytochrome c oxidase subunit 5C-1 OS=Arabidopsis thaliana GN=At2g47380 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.760e-19
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG ++AHATLKGPSVVKE             +WKMHHWNEQRKTRTFYDLLE+GEISV+A EE
Sbjct:    1 MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVVAAEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: CX5C2_ARATH (Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis thaliana GN=At3g62400 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.920e-19
Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG ++AHATLKGPSVVKE             +WKMHHWNEQRKTRTFYDLLE+GEI V+A EE
Sbjct:    1 MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEIGVVASEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: COX5C_ORYSJ (Cytochrome c oxidase subunit 5C OS=Oryza sativa subsp. japonica GN=COX5C PE=3 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 6.687e-19
Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG RIAHATLKGPSVVKE             +WKMHHWNEQRKTR+FYD+LEKG+ISV+ EE
Sbjct:    1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: COX5C_HORVU (Cytochrome c oxidase subunit 5C OS=Hordeum vulgare GN=COX5C PE=3 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 8.733e-19
Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG R+AHATLKGPSVVKE             +WKMHHWNEQRKTR+FYD+LEKG+ISV+ EE
Sbjct:    1 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: CX5C3_ARATH (Probable cytochrome c oxidase subunit 5C-3 OS=Arabidopsis thaliana GN=At5g61310 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.334e-18
Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG +IAHATLKGPSVVKE             +WKMHHWNEQRKTR FYDLLE+GEI V+  EE
Sbjct:    1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVVVTEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: CX5C2_HELAN (Cytochrome c oxidase subunit 5C-2 OS=Helianthus annuus GN=COX5C2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.393e-18
Identity = 41/64 (64.06%), Postives = 45/64 (70.31%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            M G R+AH  LKGPSVVKE             +WKMHHWNEQRKTR FYDLLEKGEISV+ +EE
Sbjct:    1 MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVVVDEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: CX5C1_HELAN (Cytochrome c oxidase subunit 5C-1 OS=Helianthus annuus GN=COX5C1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.394e-16
Identity = 39/63 (61.90%), Postives = 43/63 (68.25%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            M G R+AH  LKGPS VKE             +WKMHHWNEQRKTR FYDLLEKGEISV+ +E
Sbjct:    1 MVGGRVAHPVLKGPSEVKELIIGSVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVVVQE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: COX5C_IPOBA (Cytochrome c oxidase subunit 5C OS=Ipomoea batatas GN=COX5C PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.013e-15
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG  +AH   KGPSVVKE              WKMHHWN QR+T+ FYD+LEKG+ISV+A+EE
Sbjct:    1 MAGGHVAHLVYKGPSVVKELVIGFSLGLVAGGFWKMHHWNSQRRTKEFYDMLEKGQISVVADEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Match: CX5C4_ARATH (Putative cytochrome c oxidase subunit 5C-4 OS=Arabidopsis thaliana GN=At5g40382 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.105e-13
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 3

Query:  102 RIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            +I  A  KGPSVVKE             +WKMHHWN QR+T+ FYDLLEKGEISV+ E+E
Sbjct:    6 KIGKAVYKGPSVVKEIIYGITLGFAVGGLWKMHHWNNQRRTKEFYDLLEKGEISVVVEDE 65

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: C6T2P2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.787e-21
Identity = 49/64 (76.56%), Postives = 52/64 (81.25%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAGPRIAHATL+GPSVVKE            SVWKMHHWNEQRKTRTFYDLLEKGEISV+AEE+
Sbjct:    1 MAGPRIAHATLRGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVVAEEQ 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: D7LT63_ARALY (Cytochrome c oxidase subunit VC family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_497318 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.153e-18
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG ++AHATLKGPSVVKE             +WKMHHWNEQRKTRTFYDLLE+GEISV+A EE
Sbjct:    1 MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVVAAEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: D7LGM4_ARALY (Cytochrome c oxidase subunit VC family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483915 PE=4 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.153e-18
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG ++AHATLKGPSVVKE             +WKMHHWNEQRKTRTFYDLLE+GEISV+A EE
Sbjct:    1 MAGHKVAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVVAAEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: B9RNE3_RICCO (Cytochrome c oxidase polypeptide Vc, putative OS=Ricinus communis GN=RCOM_0557130 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.377e-18
Identity = 45/63 (71.43%), Postives = 47/63 (74.60%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG RIAHATLKGPSVVKE             +WKMHHWNEQRK R FYDLLEKGEISV+AEE
Sbjct:    1 MAGGRIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVVAEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: A3CIF7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_36508 PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.198e-17
Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG RIAHATLKGPSVVKE             +WKMHHWNEQRKTR+FYD+LEKG+ISV+ EE
Sbjct:    1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: C5YPS8_SORBI (Putative uncharacterized protein Sb08g018180 OS=Sorghum bicolor GN=Sb08g018180 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.486e-17
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG R+AHATLKGPSVVKE             +WKMHHWNEQRKTR+FYD+L+KG+ISV+ EE
Sbjct:    1 MAGGRVAHATLKGPSVVKEIFIGMTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: B4FFJ1_MAIZE (Cytochrome c oxidase polypeptide Vc OS=Zea mays PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.486e-17
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG R+AHATLKGPSVVKE             +WKMHHWNEQRKTR+FYD+L+KG+ISV+ EE
Sbjct:    1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: A9PJU3_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.486e-17
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG R+AH TLKGPSVV+E            S+WKMHHWNEQRK R+FYDLLEKGEISV+ EE
Sbjct:    1 MAGGRVAHVTLKGPSVVRELCIGFALGLVAGSLWKMHHWNEQRKVRSFYDLLEKGEISVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: A9P9E1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_664345 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.486e-17
Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG R+AH TLKGPSVV+E            S+WKMHHWNEQRK R+FYDLLEKGEISV+ EE
Sbjct:    1 MAGGRVAHVTLKGPSVVRELCIGFALGLVAGSLWKMHHWNEQRKVRSFYDLLEKGEISVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Match: B9GSS9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_799220 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.552e-17
Identity = 42/63 (66.67%), Postives = 46/63 (73.02%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEE 278
            MAG R+AH TLKGPSVVKE            S+WKMHHWNEQRK R+FYDLLEKGEI V+ EE
Sbjct:    1 MAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGVVVEE 63

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide
Match: AT2G47380.1 (| Symbols: | Cytochrome c oxidase subunit Vc family protein | chr2:19441694-19441888 FORWARD LENGTH=64)

HSP 1 Score: 94.7449 bits (234), Expect = 2.111e-20
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG ++AHATLKGPSVVKE             +WKMHHWNEQRKTRTFYDLLE+GEISV+A EE
Sbjct:    1 MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVVAAEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide
Match: AT5G61310.4 (| Symbols: | Cytochrome c oxidase subunit Vc family protein | chr5:24653543-24653737 REVERSE LENGTH=64)

HSP 1 Score: 90.1225 bits (222), Expect = 5.200e-19
Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG +IAHATLKGPSVVKE             +WKMHHWNEQRKTR FYDLLE+GEI V+  EE
Sbjct:    1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVVVTEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide
Match: AT5G61310.3 (| Symbols: | Cytochrome c oxidase subunit Vc family protein | chr5:24653543-24653737 REVERSE LENGTH=64)

HSP 1 Score: 90.1225 bits (222), Expect = 5.200e-19
Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG +IAHATLKGPSVVKE             +WKMHHWNEQRKTR FYDLLE+GEI V+  EE
Sbjct:    1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVVVTEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide
Match: AT5G61310.2 (| Symbols: | Cytochrome c oxidase subunit Vc family protein | chr5:24653543-24653737 REVERSE LENGTH=64)

HSP 1 Score: 90.1225 bits (222), Expect = 5.200e-19
Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG +IAHATLKGPSVVKE             +WKMHHWNEQRKTR FYDLLE+GEI V+  EE
Sbjct:    1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVVVTEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide
Match: AT5G61310.1 (| Symbols: | Cytochrome c oxidase subunit Vc family protein | chr5:24653543-24653737 REVERSE LENGTH=64)

HSP 1 Score: 90.1225 bits (222), Expect = 5.200e-19
Identity = 42/64 (65.62%), Postives = 46/64 (71.88%), Query Frame = 3

Query:   90 MAGPRIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            MAG +IAHATLKGPSVVKE             +WKMHHWNEQRKTR FYDLLE+GEI V+  EE
Sbjct:    1 MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVVVTEE 64

[Close]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide
Match: AT5G40382.1 (| Symbols: | Cytochrome c oxidase subunit Vc family protein | chr5:16155486-16155683 REVERSE LENGTH=65)

HSP 1 Score: 75.485 bits (184), Expect = 1.325e-14
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 3

Query:  102 RIAHATLKGPSVVKEXXXXXXXXXXXXSVWKMHHWNEQRKTRTFYDLLEKGEISVIAEEE 281
            +I  A  KGPSVVKE             +WKMHHWN QR+T+ FYDLLEKGEISV+ E+E
Sbjct:    6 KIGKAVYKGPSVVKEIIYGITLGFAVGGLWKMHHWNNQRRTKEFYDLLEKGEISVVVEDE 65

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig3709 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
CX5C1_ARATH	1.760e-19	68.75	Probable cytochrome c oxidase subunit 5C-1 OS=Arab...	[more]
CX5C2_ARATH	3.920e-19	67.19	Cytochrome c oxidase subunit 5C-2 OS=Arabidopsis t...	[more]
COX5C_ORYSJ	6.687e-19	68.25	Cytochrome c oxidase subunit 5C OS=Oryza sativa su...	[more]
COX5C_HORVU	8.733e-19	66.67	Cytochrome c oxidase subunit 5C OS=Hordeum vulgare...	[more]
CX5C3_ARATH	4.334e-18	65.63	Probable cytochrome c oxidase subunit 5C-3 OS=Arab...	[more]
CX5C2_HELAN	7.393e-18	64.06	Cytochrome c oxidase subunit 5C-2 OS=Helianthus an...	[more]
CX5C1_HELAN	1.394e-16	61.90	Cytochrome c oxidase subunit 5C-1 OS=Helianthus an...	[more]
COX5C_IPOBA	2.013e-15	56.25	Cytochrome c oxidase subunit 5C OS=Ipomoea batatas...	[more]
CX5C4_ARATH	1.105e-13	56.67	Putative cytochrome c oxidase subunit 5C-4 OS=Arab...	[more]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6T2P2_SOYBN	6.787e-21	76.56	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7LT63_ARALY	3.153e-18	68.75	Cytochrome c oxidase subunit VC family protein OS=...	[more]
D7LGM4_ARALY	3.153e-18	68.75	Cytochrome c oxidase subunit VC family protein OS=...	[more]
B9RNE3_RICCO	5.377e-18	71.43	Cytochrome c oxidase polypeptide Vc, putative OS=R...	[more]
A3CIF7_ORYSJ	1.198e-17	68.25	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5YPS8_SORBI	3.486e-17	65.08	Putative uncharacterized protein Sb08g018180 OS=So...	[more]
B4FFJ1_MAIZE	3.486e-17	65.08	Cytochrome c oxidase polypeptide Vc OS=Zea mays PE...	[more]
A9PJU3_9ROSI	3.486e-17	66.67	Putative uncharacterized protein OS=Populus tricho...	[more]
A9P9E1_POPTR	3.486e-17	66.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GSS9_POPTR	4.552e-17	66.67	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of Cicer_arietinum_v1_Contig3709 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT2G47380.1	2.111e-20	68.75	\| Symbols: \| Cytochrome c oxidase subunit Vc fami...	[more]
AT5G61310.4	5.200e-19	65.63	\| Symbols: \| Cytochrome c oxidase subunit Vc fami...	[more]
AT5G61310.3	5.200e-19	65.63	\| Symbols: \| Cytochrome c oxidase subunit Vc fami...	[more]
AT5G61310.2	5.200e-19	65.63	\| Symbols: \| Cytochrome c oxidase subunit Vc fami...	[more]
AT5G61310.1	5.200e-19	65.63	\| Symbols: \| Cytochrome c oxidase subunit Vc fami...	[more]
AT5G40382.1	1.325e-14	56.67	\| Symbols: \| Cytochrome c oxidase subunit Vc fami...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008432	Cytochrome c oxidase subunit Vc	PFAM	PF05799	COX5C	coord: 7..67 score: 1.9
None	No IPR available	SEG	seg	seg	coord: 24..35 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig3709 ID=Cicer_arietinum_v1_Contig3709; Name=Cicer_arietinum_v1_Contig3709; organism=Cicer arietinum; type=contig; length=444bp
AGCGTGGTCGCGGCCGAGGTGTTTGCTTCTCGAATTCCTTCGTCTTCGCC
CGTGCCTCTGTAATCACAAGCTTTTAAACAAAGAAGCAAATGGCTGGTCC
TAGGATTGCCCATGCTACCTTGAAGGGTCCAAGCGTTGTAAAGGAGATAA
TAATTGGAATAACACTCGGTATAGCTGCTGGTAGTGTCTGGAAGATGCAT
CACTGGAATGAACAGAGAAAAACCAGGACCTTTTACGATTTACTGGAAAA
GGGTGAGATTAGTGTTATCGCAGAGGAAGAGTAAAAATGACATCGATATG
TGCCTATGCTCTCCATATATAGGCTCTTTTGTTTATCGCTATATTCAATT
GGCTCTTTAAATGCAAATGAGCCGAGTTACTTAAACATTTGAAAATAAAT
TCTTGCTATAATTGTTGACTATGTTGGCTTACAAAACTCAAACC

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004129	cytochrome-c oxidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005746	mitochondrial respirasome

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	obsolete oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR008432	COX5C

Search form

Cicer_arietinum_v1_Contig3709