Cicer_arietinum_v1_Contig377

Contig Overview
NameCicer_arietinum_v1_Contig377
Unique NameCicer_arietinum_v1_Contig377
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length628
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR397747ESTGR397747:98..380 +
HO062429ESTHO062429:64..510 -
HO063837ESTHO063837:46..509 +
HO063407ESTHO063407:1..590 +
HO063891ESTHO063891:304..544 -
HO063967ESTHO063967:62..578 -
HO063395ESTHO063395:90..578 +
HO063994ESTHO063994:91..590 -
HO063470ESTHO063470:102..595 +
GR404957ESTGR404957:493..592 -
HO063416ESTHO063416:55..609 +
HO065671ESTHO065671:300..628 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR397747GR397747Cicer arietinumEST
HO062429HO062429Cicer arietinumEST
HO063837HO063837Cicer arietinumEST
HO063407HO063407Cicer arietinumEST
HO063891HO063891Cicer arietinumEST
HO063967HO063967Cicer arietinumEST
HO063395HO063395Cicer arietinumEST
HO063994HO063994Cicer arietinumEST
HO063470HO063470Cicer arietinumEST
GR404957GR404957Cicer arietinumEST
HO063416HO063416Cicer arietinumEST
HO065671HO065671Cicer arietinumEST


InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 9..65
score
NoneNo IPR availableSEGsegsegcoord: 27..50
score
NoneNo IPR availableSEGsegsegcoord: 1..24
score: NAcoord: 46..55
score
NoneNo IPR availableSEGsegsegcoord: 41..89
score
NoneNo IPR availablePRINTSPR00211GLUTELINcoord: 7..24
score: 5.3e-05coord: 45..65
score: 5.3
NoneNo IPR availableSEGsegsegcoord: 30..81
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig377 ID=Cicer_arietinum_v1_Contig377; Name=Cicer_arietinum_v1_Contig377; organism=Cicer arietinum; type=contig; length=628bp
CGGCCGCGGGAATTCGATTTCGAGCGGCCGCCCGGGCAGGTACGCGGGGG
AGGTCGACCGCGAGAAGGCGAAGCCGAGCGAGGTACTGGAGGAGGTGCAA
ATGGAGGCGTTGGTGCTAGTGCAGGAGGAGGTATTGGAACTGGTGGAGGT
GTAGGAGCAAGAGTTAATGGTGGTGCACGAGCAGGTGTTATTGCAACTAG
AGGTGCTAAAATTGACGAAAGTAGAAAGGGCATACTTAGAGTTTCTAAAG
ATACTAAATTTGGTATTACCAAAAAAAGTGTTCATGCAAAAAATAAAGGT
GATCCTCAAGCTTAAAATTTGGGTAAGTGGTGGAGGTATTGACCTTTAAT
TATATACACGAAGAGATTTTAGTATAGTTGAAAGAATAAATAATTGAGTT
ATTGTAGATGAAACTCAATATATTATAATTAATAGAAATAAGAAGTGATT
ACAGTGATATTGTACACCACTCTGATATAAGTATTGAATGTAAAGATCAT
CATCTATCTTAACTTCTATAGTTGAGATTTATGTAGATTGTTATTATATG
GCCTATTGCAAGTAATTAGTGGACAATATATGAGTGTTGTAAATTATCTT
GAAGTACCTGCCCGGGCGGCCGCTCGAA
back to top