|
Contig Overview
Name | Cicer_arietinum_v1_Contig411 |
Unique Name | Cicer_arietinum_v1_Contig411 |
Type | contig |
Organism | Cicer arietinum (chickpea) |
Sequence length | 628 |
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR017956 | AT hook, DNA-binding motif | SMART | SM00384 | no description | coord: 79..91 score: 0.59coord: 101..113 score: 5.1coord: 145..157 score |
IPR020478 | AT hook-like | PRINTS | PR00929 | ATHOOK | coord: 79..89 score: 2.3e-07coord: 99..110 score: 2.3e-07coord: 143..153 score: 2.3 |
None | No IPR available | SEG | seg | seg | coord: 61..87 score |
None | No IPR available | SEG | seg | seg | coord: 8..28 score: NAcoord: 30..41 score |
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig411 ID=Cicer_arietinum_v1_Contig411; Name=Cicer_arietinum_v1_Contig411; organism=Cicer arietinum; type=contig; length=628bp GGGCTGAAGGGTTGATTGAGCGTCGAGTATTGCGCTCAAGGTCTAAGAGG GGCGATGACAAAATATCTTATAATGGAGGGAATGATGGTGTCTTTTCTGG GAGTAATGGAGAAAATGGTGGGTTTGAGAGGAGGATAAAAGTCAAGACGG AGTATGAAGAAGTTGACGAGGATTTAACTGATGGCAACAAGAATGAAAAG GTTAAGGTAAAAGTGGGAGGTCAGGGGAAGAAGTTGAAACGGAAGCGTGG GAGGCCTCCCAAAACAGAGTTAAAAGAGAAAGATCAATTAGTTGATAAGC CACAGCGTAAGCTTGGGAGGCCTCCCAAAACAGAGTTAAAAGAGAACAAT CAGTTACTTGATCAGCCACTGCGTAAGCGTGGTAGGCGTCCCAAAACAGA GATAAAAGAGAAGGATTGGTTAGTTGATCAGTCACCGCGGAAGCGTGGAA GACGCCCCAAGACTGACCAACAAAAACATCTCATGACTGTGGGGCATAAT AGTAAAGGAAAGGCAAGCCTTCAAGAAGGTAAAGAAGTTTTAACCATAAG AGATGGTTCAAGGACAAATGCAGTTGATAATACATGTTCAAGGAGATCTT CTGGTAAAGAGTTAAAAGAGAAGGGATC back to top
Annotated Terms
The
following terms have been associated with
this contig:
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
|