Cicer_arietinum_v1_Contig412

Contig Overview


Name	Cicer_arietinum_v1_Contig412
Unique Name	Cicer_arietinum_v1_Contig412
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	586

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
HO067840	EST	HO067840:1..586 +
HO067371	EST	HO067371:4..560 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO067840	HO067840	Cicer arietinum	EST
HO067371	HO067371	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: B8XQT7_SOYBN (NPR1-2 protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.544e-11
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            ++HNICSS  SD   NLE +SLSKLSSN EQLLI++D DYSDA+IVVEGI
Sbjct:   24 VSHNICSSYGSDPGPNLEALSLSKLSSNFEQLLIETDCDYSDADIVVEGI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: B8XQT6_SOYBN (NPR1-2 protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.544e-11
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            ++HNICSS  SD   NLE +SLSKLSSN EQLLI++D DYSDA+IVVEGI
Sbjct:   24 VSHNICSSYGSDPGPNLEALSLSKLSSNFEQLLIETDCDYSDADIVVEGI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: B8XQT5_SOYBN (NPR1-1 protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.667e-11
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            ++HNIC S  SD   NLE ISLSKLSSNLEQLLI+ D DYSDA++VVEGI
Sbjct:   24 VSHNICPSYGSDPGPNLEAISLSKLSSNLEQLLIEPDCDYSDADLVVEGI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: B8XQT4_SOYBN (NPR1-1 protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.667e-11
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            ++HNIC S  SD   NLE ISLSKLSSNLEQLLI+ D DYSDA++VVEGI
Sbjct:   24 VSHNICPSYGSDPGPNLEAISLSKLSSNLEQLLIEPDCDYSDADLVVEGI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: A5ASG3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004499 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.265e-10
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 3

Query:  438 THNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            +HN+ SS+ S+   +LE+ISLSKLSSNLEQLL+DS  DYSDAEI+VEGI
Sbjct:   25 SHNMSSSSGSETGPSLEIISLSKLSSNLEQLLVDSGCDYSDAEIIVEGI 73

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: Q1HIU5_POPTR (Ankyrin repeat BTB/POZ domain-containing protein OS=Populus trichocarpa GN=NPR41 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.381e-9
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEG 581
            I+HNI +S+ ++   +LEVISL+KLSSNLEQLLIDS  DYSDA+IVVEG
Sbjct:   24 ISHNISNSSGAEAGTSLEVISLNKLSSNLEQLLIDSTCDYSDADIVVEG 72

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: B9ICJ6_POPTR (NPR1/NIM1-like regulatory protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_253241 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.381e-9
Identity = 34/49 (69.39%), Postives = 42/49 (85.71%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEG 581
            I+HNI +S+ ++   +LEVISL+KLSSNLEQLLIDS  DYSDA+IVVEG
Sbjct:   24 ISHNISNSSGAEAGTSLEVISLNKLSSNLEQLLIDSTCDYSDADIVVEG 72

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: C0LU31_9ROSA (NPR-1 OS=Pyrus x bretschneideri PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.659e-8
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            I+HN+ S + S+   +LEVISLSKLSS+LEQLLID   DYSDA+IVVEGI
Sbjct:   24 ISHNL-SCSGSESVPSLEVISLSKLSSSLEQLLIDPGCDYSDADIVVEGI 72

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: B2MVK5_MALDO (NPR1-like protein OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.659e-8
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            I+HN+ S + S+   +LEVISLSKLSS+LEQLLID   DYSDA+IVVEGI
Sbjct:   24 ISHNL-SCSGSESVPSLEVISLSKLSSSLEQLLIDPGCDYSDADIVVEGI 72

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Match: A0T2G1_PYRPY (NPR-1 OS=Pyrus pyrifolia PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 7.659e-8
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 3

Query:  435 ITHNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            I+HN+ S + S+   +LEVISLSKLSS+LEQLLID   DYSDA+IVVEGI
Sbjct:   24 ISHNL-SCSGSESVPSLEVISLSKLSSSLEQLLIDPGCDYSDADIVVEGI 72

[Close]

BLAST of Cicer_arietinum_v1_Contig412 vs. TAIR peptide
Match: AT5G45110.1 (| Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr5:18229319-18231334 FORWARD LENGTH=586)

HSP 1 Score: 55.8398 bits (133), Expect = 1.897e-8
Identity = 30/49 (61.22%), Postives = 40/49 (81.63%), Query Frame = 3

Query:  438 THNICSSNASDHCRNLEVISLSKLSSNLEQLLIDSDNDYSDAEIVVEGI 584
            +++  SS+AS    N EV+SL+KLSSNLEQLL +SD DYSDAEI+V+G+
Sbjct:   25 SNHFSSSSAS----NPEVVSLTKLSSNLEQLLSNSDCDYSDAEIIVDGV 69

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig412 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig412 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B8XQT7_SOYBN	2.544e-11	72.00	NPR1-2 protein OS=Glycine max PE=2 SV=1	[more]
B8XQT6_SOYBN	2.544e-11	72.00	NPR1-2 protein (Fragment) OS=Glycine max PE=4 SV=1	[more]
B8XQT5_SOYBN	5.667e-11	72.00	NPR1-1 protein OS=Glycine max PE=2 SV=1	[more]
B8XQT4_SOYBN	5.667e-11	72.00	NPR1-1 protein (Fragment) OS=Glycine max PE=4 SV=1	[more]
A5ASG3_VITVI	6.265e-10	69.39	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q1HIU5_POPTR	2.381e-9	69.39	Ankyrin repeat BTB/POZ domain-containing protein O...	[more]
B9ICJ6_POPTR	2.381e-9	69.39	NPR1/NIM1-like regulatory protein (Fragment) OS=Po...	[more]
C0LU31_9ROSA	7.659e-8	68.00	NPR-1 OS=Pyrus x bretschneideri PE=2 SV=1	[more]
B2MVK5_MALDO	7.659e-8	68.00	NPR1-like protein OS=Malus domestica PE=2 SV=1	[more]
A0T2G1_PYRPY	7.659e-8	68.00	NPR-1 OS=Pyrus pyrifolia PE=2 SV=1	[more]

BLAST of Cicer_arietinum_v1_Contig412 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G45110.1	1.897e-8	61.22	\| Symbols: NPR3, ATNPR3 \| NPR1-like protein 3 \| ch...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 4..24 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig412 ID=Cicer_arietinum_v1_Contig412; Name=Cicer_arietinum_v1_Contig412; organism=Cicer arietinum; type=contig; length=586bp
TTTACAGAATTTGTAGATATACCAATTAATCTAAGAGCTTATAGGTTTTG
TAATAGAGAAAAAGTTAAGGACTTTTTAGTTTTTTTTCTTCTTTGTTTTG
TATGTTATATGGAACTTTGTCTTGGAATTTGGTGAGATGTTGCATCATGT
CATGTGTTTTGTGATGTAAGATATTTGCATTAAACACTTGTTCAAATTGG
TGTTTATCATTTACATAGATACTAGTTTCTATATATAGAATTGCTTTTGT
TTTTAGTATTTTATCTCATTAGTAAAGGATTTTAGGATTCTATATAAGAG
AAAACTTTTATATCAGAAGATTATGTTATGTAGGTTCACATAGATTCTCA
ATTTCATAATAAATGGCTAATAATTCATCTGAACCCTCATCATCTTTAAG
CTTTACATCATCTTCACCTTTATCAAATGGCTCAATTACTCATAACATAT
GCTCTTCTAATGCCTCAGATCACTGTCGAAATCTCGAGGTTATTAGTTTG
AGTAAGCTTAGCTCTAATTTAGAACAGCTTTTGATTGATTCTGATAATGA
TTATAGCGATGCCGAAATTGTTGTGGAGGGTATTCT

Search form

Cicer_arietinum_v1_Contig412