Cicer_arietinum_v1_Contig415

Contig Overview
NameCicer_arietinum_v1_Contig415
Unique NameCicer_arietinum_v1_Contig415
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length551
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR406345ESTGR406345:32..132 +Cicer arietinum unigene v1n/a
GR403266ESTGR403266:118..446 -Cicer arietinum unigene v1n/a
HO067805ESTHO067805:1..551 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR406345GR406345Cicer arietinumEST
GR403266GR403266Cicer arietinumEST
HO067805HO067805Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig415 vs. SwissProt
Match: QCR6_SOLTU (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 2.204e-25
Identity = 51/69 (73.91%), Postives = 55/69 (79.71%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            M+DEE VD K  LE SCKPKCV+ L EYQAC KR+ GDE+G KHCTGQYFDYW CIDKCVA KLF  LK
Sbjct:    1 MSDEEVVDPKATLEVSCKPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCVAAKLFDHLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: C6SZG8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.019e-32
Identity = 62/69 (89.86%), Postives = 67/69 (97.10%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MADEEPVDQKRYLE+SCKPKCVKPLLEYQAC+KRI GDE+GQKHCTGQYFDYW+CIDKCVA KLF+KLK
Sbjct:    1 MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDESGQKHCTGQYFDYWSCIDKCVAPKLFTKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: C6T1W4_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.270e-32
Identity = 61/69 (88.41%), Postives = 67/69 (97.10%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MADEEPVDQKRYLE+SCKPKCVKPLLEYQAC+KRI GD++GQKHCTGQYFDYW+CIDKCVA KLF+KLK
Sbjct:    1 MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCVAPKLFTKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: B9GTJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_710785 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.127e-31
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MADEEPVD K+YLE+SCKPKCV+PLLEYQACVKRI+GDETG KHCTGQYFDYW+C+DKCVA KLFSKLK
Sbjct:    1 MADEEPVDPKKYLEESCKPKCVRPLLEYQACVKRIQGDETGHKHCTGQYFDYWSCVDKCVALKLFSKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: B9H7R3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_714709 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.627e-30
Identity = 57/69 (82.61%), Postives = 66/69 (95.65%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MADEEPVD K+YLE++CKPKCV+PLLEYQACVKRI+GDE+G KHCTGQYFDYW+C+DKCVA KLF+KLK
Sbjct:    1 MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCVAPKLFTKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: B9GTK0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_551330 PE=4 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.624e-30
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = -1
Query:  222 ADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 425
            ADEE VDQK+YLEDSCKPKCVKPLLEY+ACVKR+ GDE+G KHCTGQYFDYW CIDKCVA KLFSKLK
Sbjct:   17 ADEELVDQKKYLEDSCKPKCVKPLLEYEACVKRVEGDESGHKHCTGQYFDYWYCIDKCVAPKLFSKLK 84          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: B9H7R2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_651547 PE=4 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.733e-30
Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MADEE VDQK+YLEDSCKPKCVKPLLEY+ACVKR+ GD+T QKHCTGQYFDYW CIDKCVA KL SKLK
Sbjct:    1 MADEELVDQKKYLEDSCKPKCVKPLLEYEACVKRVEGDDTSQKHCTGQYFDYWFCIDKCVAPKLLSKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: Q0WWE3_ARATH (AT1G15120 protein OS=Arabidopsis thaliana GN=AT1G15120 PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.349e-29
Identity = 57/69 (82.61%), Postives = 64/69 (92.75%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MAD+E VD K+YLE+SCKPKCVKPLLEYQACVKRI+GD++G KHCTGQYFDYW CIDKCVA KLF+KLK
Sbjct:    1 MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: Q8LDP7_ARATH (Putative ubiquinol--cytochrome-c reductase OS=Arabidopsis thaliana PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.166e-28
Identity = 56/69 (81.16%), Postives = 63/69 (91.30%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MAD+E VD K+YLE+SCKPKCVKPLLEYQACVKRI+ D++G KHCTGQYFDYW CIDKCVA KLF+KLK
Sbjct:    1 MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQSDDSGHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: D7KCN0_ARALY (Predicted protein (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_679246 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.166e-28
Identity = 56/68 (82.35%), Postives = 63/68 (92.65%), Query Frame = -1
Query:  222 ADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 425
            AD+E VD K+YLE+SCKPKCVKPLLEYQACVKRI+GD++G KHCTGQYFDYW CIDKCVA KLF+KLK
Sbjct:    2 ADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWHCIDKCVAPKLFAKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Match: B9T2H1_RICCO (Ubiquinol-cytochrome c reductase complex 7.8 kDa protein, putative OS=Ricinus communis GN=RCOM_0454060 PE=4 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.392e-28
Identity = 53/60 (88.33%), Postives = 59/60 (98.33%), Query Frame = -1
Query:  246 ADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVA 425
            ADEEPVDQK+YLE+SCKPKCVKPLLEY+ACVKRIRGDETG KHCTGQYFDYW+C+DKCV+
Sbjct:   36 ADEEPVDQKKYLEESCKPKCVKPLLEYEACVKRIRGDETGHKHCTGQYFDYWSCVDKCVS 95          
BLAST of Cicer_arietinum_v1_Contig415 vs. TAIR peptide
Match: AT1G15120.1 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr1:5203091-5203897 FORWARD LENGTH=69)

HSP 1 Score: 132.109 bits (331), Expect = 1.879e-31
Identity = 57/69 (82.61%), Postives = 64/69 (92.75%), Query Frame = -1
Query:  222 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKLFSKLK 428
            MAD+E VD K+YLE+SCKPKCVKPLLEYQACVKRI+GD++G KHCTGQYFDYW CIDKCVA KLF+KLK
Sbjct:    1 MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCVAPKLFAKLK 69          
BLAST of Cicer_arietinum_v1_Contig415 vs. TAIR peptide
Match: AT1G15120.2 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr1:5202648-5203950 FORWARD LENGTH=166)

HSP 1 Score: 120.553 bits (301), Expect = 5.656e-28
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = -1
Query:  237 LPNTTHSLTPISLHHLA------MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVATKL 479
            LP    S +P+S+   +      MAD+E VD K+YLE+SCKPKCVKPLLEYQACVKRI+GD++G KHCTGQYFDYW CIDKC  T++
Sbjct:   45 LPCFFESRSPLSISVFSFQLTFNMADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKCFDTEM 131          
BLAST of Cicer_arietinum_v1_Contig415 vs. TAIR peptide
Match: AT2G01090.2 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr2:80179-80957 FORWARD LENGTH=62)

HSP 1 Score: 115.931 bits (289), Expect = 1.393e-26
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = -1
Query:  246 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVA 428
            M +E+ VDQKRY E+SCKPKCVKPLLEYQACVKRI+ DE+G KHCTGQYFDYW C+DKCV+
Sbjct:    1 MPEEDVVDQKRYFEESCKPKCVKPLLEYQACVKRIQDDESGHKHCTGQYFDYWHCVDKCVS 61          
BLAST of Cicer_arietinum_v1_Contig415 vs. TAIR peptide
Match: AT2G01090.1 (| Symbols: | Ubiquinol-cytochrome C reductase hinge protein | chr2:80179-80957 FORWARD LENGTH=62)

HSP 1 Score: 115.931 bits (289), Expect = 1.393e-26
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = -1
Query:  246 MADEEPVDQKRYLEDSCKPKCVKPLLEYQACVKRIRGDETGQKHCTGQYFDYWACIDKCVA 428
            M +E+ VDQKRY E+SCKPKCVKPLLEYQACVKRI+ DE+G KHCTGQYFDYW C+DKCV+
Sbjct:    1 MPEEDVVDQKRYFEESCKPKCVKPLLEYQACVKRIQDDESGHKHCTGQYFDYWHCVDKCVS 61          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig415 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
QCR6_SOLTU2.204e-2573.91Cytochrome b-c1 complex subunit 6 OS=Solanum tuber... [more]
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BLAST of Cicer_arietinum_v1_Contig415 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SZG8_SOYBN1.019e-3289.86Putative uncharacterized protein OS=Glycine max PE... [more]
C6T1W4_SOYBN2.270e-3288.41Putative uncharacterized protein OS=Glycine max PE... [more]
B9GTJ9_POPTR1.127e-3186.96Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9H7R3_POPTR1.627e-3082.61Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9GTK0_POPTR3.624e-3086.76Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9H7R2_POPTR4.733e-3085.51Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q0WWE3_ARATH2.349e-2982.61AT1G15120 protein OS=Arabidopsis thaliana GN=AT1G1... [more]
Q8LDP7_ARATH1.166e-2881.16Putative ubiquinol--cytochrome-c reductase OS=Arab... [more]
D7KCN0_ARALY1.166e-2882.35Predicted protein (Fragment) OS=Arabidopsis lyrata... [more]
B9T2H1_RICCO3.392e-2888.33Ubiquinol-cytochrome c reductase complex 7.8 kDa p... [more]
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BLAST of Cicer_arietinum_v1_Contig415 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT1G15120.11.879e-3182.61| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
AT1G15120.25.656e-2863.22| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
AT2G01090.21.393e-2678.69| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
AT2G01090.11.393e-2678.69| Symbols: | Ubiquinol-cytochrome C reductase hin... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023184Ubiquinol-cytochrome C reductase hinge domainGENE3D1.10.287.20no descriptioncoord: 27..93
score: 5.9
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 31..93
score: 2.5
IPR023184Ubiquinol-cytochrome C reductase hinge domainSUPERFAMILY81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 25..93
score: 2.5

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig415 ID=Cicer_arietinum_v1_Contig415; Name=Cicer_arietinum_v1_Contig415; organism=Cicer arietinum; type=contig; length=551bp
CCAAAAAACGTTTTTCCAAATCACAAGAGTTACAATTTGGATAAATGTTC
TTATTAATTATATTTCTAGGCCTTCATGGGCTCAAAATTTCTCAGTAATC
ACAATAACAACCGTACAGGGAATATAGCTTGGATACAAAATCAAGTGTTT
AGAGACAGTTATTTAGGAATGAAACAAGAACAGAACGCAATAATGACATT
CCATGAAATTTGCCCCTATTACTTCAGTTTGGAGAATAGCTTTGTTGCAA
CACATTTGTCGATGCAAGCCCAATAATCAAAATATTGTCCAGTACAATGT
TTCTGCCCAGTTTCATCACCTCGTATCCTTTTTACACATGCCTGATATTC
AAGTAATGGTTTCACACACTTCGGTTTGCAAGAGTCTTCGAGATATCTCT
TCTGGTCCACAGGTTCCTCGTCAGCCATTGCAAGATGGTGAAGAGAGATT
GGAGTGAGTGAGTGAGTGGTATTAGGCAGTGATGTTGTTTGTTTGGGTCC
TCAATGCCTCTAATTCGGATCTCACTCTGCTTTCGATTTAATTCAATTCA
T
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR023184Ubol_cytC_Rdtase_hinge_dom