Cicer_arietinum_v1_Contig420

Contig Overview


Name	Cicer_arietinum_v1_Contig420
Unique Name	Cicer_arietinum_v1_Contig420
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	655

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HO067784	EST	HO067784:1..503 +	Cicer arietinum unigene v1	n/a
HO063291	EST	HO063291:10..643 +	Cicer arietinum unigene v1	n/a
HO062481	EST	HO062481:154..655 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO067784	HO067784	Cicer arietinum	EST
HO063291	HO063291	Cicer arietinum	EST
HO062481	HO062481	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD2_ORYSJ (Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica GN=Os05g0311000 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.070e-41
Identity = 80/102 (78.43%), Postives = 90/102 (88.24%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAPSV QIDGEWRYDSRNS+LEWS+LLID SNRSGSMEFVVP AD S FFPIS+ F+A+ TFSDLKVT I PLK GN PKY+QR++L+T NYQVV
Sbjct:  422 IPLPALREAPSVRQIDGEWRYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVTANYQVV 523

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD1_ORYSJ (Coatomer subunit delta-1 OS=Oryza sativa subsp. japonica GN=Os05g0310800 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.445e-40
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAPSV QIDGEW+YDSRNS+LEWS+LLID SNRSGSMEFVVP AD S FFPIS+ F+A+ TFSDLKVT I PLK GN PKY+QR++L+  NYQVV
Sbjct:  423 IPLPALREAPSVRQIDGEWKYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVAANYQVV 524

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD_ARATH (Coatomer subunit delta OS=Arabidopsis thaliana GN=At5g05010 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 8.486e-39
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGN--IPKYAQRSQLITENYQVV 636
            VPLPALREAPSV Q DGEWRYD RNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL+GG    P++ QR+QLI +NYQV+
Sbjct:  424 VPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD3_ORYSJ (Coatomer subunit delta-3 OS=Oryza sativa subsp. japonica GN=Os01g0833700 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.383e-38
Identity = 73/102 (71.57%), Postives = 88/102 (86.27%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAP V QIDGEWRYDSRNS+LEWS++L+D SNRSGS+EF VP AD S FFPISV F+A+ TFSDLKVT I PL+ G+ PK++QR++L+T NYQVV
Sbjct:  417 IPLPALREAPGVRQIDGEWRYDSRNSVLEWSIILVDQSNRSGSLEFTVPAADPSTFFPISVGFSASNTFSDLKVTAIRPLREGSPPKFSQRNRLVTYNYQVV 518

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD4_ORYSJ (Coatomer subunit delta-4 OS=Oryza sativa subsp. japonica GN=Os08g0368000 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.311e-36
Identity = 73/103 (70.87%), Postives = 88/103 (85.44%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPL-KGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAP V QIDGEW+YDSRNS+LEWS++LID SNRSGSMEFVVP AD S F+PISV F+A+ TFS++KVT I PL +G N PKY+QR +L+ +NYQVV
Sbjct:  274 IPLPALREAPRVRQIDGEWKYDSRNSVLEWSIILIDQSNRSGSMEFVVPPADPSMFYPISVGFSASNTFSNVKVTGIRPLNEGSNPPKYSQRVRLVADNYQVV 376

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD_RAT (Coatomer subunit delta OS=Rattus norvegicus GN=Arcn1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.543e-15
Identity = 34/102 (33.33%), Postives = 66/102 (64.71%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLP+   AP + +IDGE+R+DSR + LEW + +ID  N+SGS+EF +P    + FFP+ V F + + + +++VT +  + G +  +++  +  + + Y+++
Sbjct:  411 IPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD_MOUSE (Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.543e-15
Identity = 34/102 (33.33%), Postives = 66/102 (64.71%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLP+   AP + +IDGE+R+DSR + LEW + +ID  N+SGS+EF +P    + FFP+ V F + + + +++VT +  + G +  +++  +  + + Y+++
Sbjct:  411 IPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD_CHICK (Coatomer subunit delta OS=Gallus gallus GN=ARCN1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.486e-14
Identity = 33/102 (32.35%), Postives = 66/102 (64.71%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLP+   AP + +IDGE+R+DSR ++LEW + +ID  N+SGS+EF +     + FFP+ V F + + + +++VT +  + G +  +++  +  + + Y+++
Sbjct:  410 IPLPSGVGAPVIGEIDGEYRHDSRRNLLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 510

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD_PONAB (Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.241e-14
Identity = 33/102 (32.35%), Postives = 65/102 (63.73%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLP+   AP + +IDGE+R+DSR + LEW + +ID  N+SGS+EF +     + FFP+ V F + + + +++VT +  + G +  +++  +  + + Y+++
Sbjct:  411 IPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Match: COPD_HUMAN (Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.241e-14
Identity = 33/102 (32.35%), Postives = 65/102 (63.73%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLP+   AP + +IDGE+R+DSR + LEW + +ID  N+SGS+EF +     + FFP+ V F + + + +++VT +  + G +  +++  +  + + Y+++
Sbjct:  411 IPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL 511

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: D7T9L8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012108001 PE=4 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.751e-43
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            VPLPALREAP+V QIDGEWRYDSRNSILEWS+LLIDNSNRSGSMEFVVP ADSS FFPISVRFTA +TFSDLKV N++PL+GG  PK++QR+ LITENYQVV
Sbjct:  460 VPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 561

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: A5B542_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008875 PE=4 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.751e-43
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            VPLPALREAP+V QIDGEWRYDSRNSILEWS+LLIDNSNRSGSMEFVVP ADSS FFPISVRFTA +TFSDLKV N++PL+GG  PK++QR+ LITENYQVV
Sbjct:  430 VPLPALREAPNVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSVFFPISVRFTAAKTFSDLKVVNVLPLRGGPPPKFSQRTTLITENYQVV 531

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: B9I4N7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_570607 PE=4 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.663e-42
Identity = 85/101 (84.16%), Postives = 94/101 (93.07%), Query Frame = -2

Query:  334 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQV 636
            VPLPALRE PSV QIDGEWRYDSRNSILEWS+LLIDNSNRSGSMEFVVP ADSS+FFPISVRF+AT T+S+LKV NI+PLKGG  PK++QR+QLITENYQV
Sbjct:  428 VPLPALREPPSVRQIDGEWRYDSRNSILEWSILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSELKVVNILPLKGGAPPKFSQRTQLITENYQV 528

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: B9ICR4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_824854 PE=4 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.839e-42
Identity = 83/102 (81.37%), Postives = 95/102 (93.14%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            VPLPALREAP+V QIDGEWRYD+RNSILEWS+LLIDNSNRSGSMEFVVP  DSSAFFPI+V+F+AT T+S+LKV NI+PLKGG  PK++QR+QLITENYQVV
Sbjct:  428 VPLPALREAPNVRQIDGEWRYDARNSILEWSILLIDNSNRSGSMEFVVPSGDSSAFFPITVQFSATSTYSELKVANILPLKGGAPPKFSQRTQLITENYQVV 529

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: B9SKR2_RICCO (Coatomer delta subunit, putative OS=Ricinus communis GN=RCOM_1604100 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.408e-41
Identity = 81/102 (79.41%), Postives = 92/102 (90.20%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            VPLPALREAPSV  IDGEWRYDSRNS+LEWS+LLIDNSNRSG MEFVVP ADSS FFPISVRF+AT T+SDLKV N++PL+GG  PK+AQR+QLI E+YQ+V
Sbjct:  429 VPLPALREAPSVGDIDGEWRYDSRNSVLEWSILLIDNSNRSGQMEFVVPPADSSTFFPISVRFSATSTYSDLKVVNVLPLRGGPSPKFAQRTQLIAESYQIV 530

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: B9FNT2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_18004 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.915e-40
Identity = 80/102 (78.43%), Postives = 90/102 (88.24%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAPSV QIDGEWRYDSRNS+LEWS+LLID SNRSGSMEFVVP AD S FFPIS+ F+A+ TFSDLKVT I PLK GN PKY+QR++L+T NYQVV
Sbjct:  287 IPLPALREAPSVRQIDGEWRYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVTANYQVV 388

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: B8AWD9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19411 PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.915e-40
Identity = 80/102 (78.43%), Postives = 90/102 (88.24%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAPSV QIDGEWRYDSRNS+LEWS+LLID SNRSGSMEFVVP AD S FFPIS+ F+A+ TFSDLKVT I PLK GN PKY+QR++L+T NYQVV
Sbjct:  506 IPLPALREAPSVRQIDGEWRYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVTANYQVV 607

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: Q9M640_MAIZE (Delta-COP OS=Zea mays PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.936e-39
Identity = 78/102 (76.47%), Postives = 92/102 (90.20%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAPSV QIDGEW++DSRNS+LEWS+LLID SNRSGSMEFVVP AD S+FFPISV F+A+ TFSDLKVT I+PLK GN PK++QR++L+T NYQVV
Sbjct:  422 IPLPALREAPSVRQIDGEWKFDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSSFFPISVGFSASSTFSDLKVTGILPLKEGNPPKFSQRARLLTANYQVV 523

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: B9FNT1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_18003 PE=4 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.008e-39
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPALREAPSV QIDGEW+YDSRNS+LEWS+LLID SNRSGSMEFVVP AD S FFPIS+ F+A+ TFSDLKVT I PLK GN PKY+QR++L+  NYQVV
Sbjct:  677 IPLPALREAPSVRQIDGEWKYDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSTFFPISIGFSASSTFSDLKVTGIRPLKDGNPPKYSQRARLVAANYQVV 778

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Match: B6TDR8_MAIZE (Coatomer subunit delta OS=Zea mays PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.903e-38
Identity = 77/102 (75.49%), Postives = 91/102 (89.22%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGNIPKYAQRSQLITENYQVV 636
            +PLPA+REAPSV QIDGEW+ DSRNS+LEWS+LLID SNRSGSMEFVVP AD S+FFPISV F+A+ TFSDLKVT I+PLK GN PK++QR++L+T NYQVV
Sbjct:  416 IPLPAVREAPSVRQIDGEWKLDSRNSVLEWSILLIDQSNRSGSMEFVVPPADPSSFFPISVGFSASSTFSDLKVTGILPLKEGNPPKFSQRARLLTANYQVV 517

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TAIR peptide
Match: AT5G05010.2 (| Symbols: | clathrin adaptor complexes medium subunit family protein | chr5:1477137-1479872 FORWARD LENGTH=527)

HSP 1 Score: 160.229 bits (404), Expect = 8.774e-40
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGN--IPKYAQRSQLITENYQVV 636
            VPLPALREAPSV Q DGEWRYD RNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL+GG    P++ QR+QLI +NYQV+
Sbjct:  424 VPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527

[Close]

BLAST of Cicer_arietinum_v1_Contig420 vs. TAIR peptide
Match: AT5G05010.1 (| Symbols: | clathrin adaptor complexes medium subunit family protein | chr5:1477137-1479872 FORWARD LENGTH=527)

HSP 1 Score: 160.229 bits (404), Expect = 8.774e-40
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = -2

Query:  331 VPLPALREAPSVSQIDGEWRYDSRNSILEWSVLLIDNSNRSGSMEFVVPQADSSAFFPISVRFTATETFSDLKVTNIIPLKGGN--IPKYAQRSQLITENYQVV 636
            VPLPALREAPSV Q DGEWRYD RNS+LEWS+LLIDNSNRSGSMEFVVP  DSS FFPISV+F AT T+S LKVT +IPL+GG    P++ QR+QLI +NYQV+
Sbjct:  424 VPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig420 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig420 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
COPD2_ORYSJ	4.070e-41	78.43	Coatomer subunit delta-2 OS=Oryza sativa subsp. ja...	[more]
COPD1_ORYSJ	3.445e-40	76.47	Coatomer subunit delta-1 OS=Oryza sativa subsp. ja...	[more]
COPD_ARATH	8.486e-39	74.04	Coatomer subunit delta OS=Arabidopsis thaliana GN=...	[more]
COPD3_ORYSJ	9.383e-38	71.57	Coatomer subunit delta-3 OS=Oryza sativa subsp. ja...	[more]
COPD4_ORYSJ	2.311e-36	70.87	Coatomer subunit delta-4 OS=Oryza sativa subsp. ja...	[more]
COPD_RAT	6.543e-15	33.33	Coatomer subunit delta OS=Rattus norvegicus GN=Arc...	[more]
COPD_MOUSE	6.543e-15	33.33	Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE...	[more]
COPD_CHICK	2.486e-14	32.35	Coatomer subunit delta OS=Gallus gallus GN=ARCN1 P...	[more]
COPD_PONAB	4.241e-14	32.35	Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE...	[more]
COPD_HUMAN	4.241e-14	32.35	Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE...	[more]

BLAST of Cicer_arietinum_v1_Contig420 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
D7T9L8_VITVI	9.751e-43	83.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5B542_VITVI	9.751e-43	83.33	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9I4N7_POPTR	1.663e-42	84.16	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9ICR4_POPTR	4.839e-42	81.37	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SKR2_RICCO	1.408e-41	79.41	Coatomer delta subunit, putative OS=Ricinus commun...	[more]
B9FNT2_ORYSJ	5.915e-40	78.43	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AWD9_ORYSI	5.915e-40	78.43	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q9M640_MAIZE	2.936e-39	76.47	Delta-COP OS=Zea mays PE=2 SV=1	[more]
B9FNT1_ORYSJ	5.008e-39	76.47	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B6TDR8_MAIZE	1.903e-38	75.49	Coatomer subunit delta OS=Zea mays PE=2 SV=1	[more]

BLAST of Cicer_arietinum_v1_Contig420 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G05010.2	8.774e-40	74.04	\| Symbols: \| clathrin adaptor complexes medium su...	[more]
AT5G05010.1	8.774e-40	74.04	\| Symbols: \| clathrin adaptor complexes medium su...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008968	Clathrin adaptor, mu subunit, C-terminal	PFAM	PF00928	Adap_comp_sub	coord: 7..85 score: 6.7
IPR008968	Clathrin adaptor, mu subunit, C-terminal	PROFILE	PS51072	MHD	coord: 1..108 score: 14
None	No IPR available	PANTHER	PTHR10121	COATOMER DELTA SUBUNIT	coord: 7..108 score: 5.5

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig420 ID=Cicer_arietinum_v1_Contig420; Name=Cicer_arietinum_v1_Contig420; organism=Cicer arietinum; type=contig; length=655bp
TTTTTTTTTACCCAACTAGTAAGTTTACTACCATGTATTAAATAGTTGAT
GATCGATTTGCATTTGACTTGCAAGTCTTCGGAAAATTATAAGACTCAAC
ACAAAAAAAGAGGGAGATGATAAATGCATTCTTCCACATGAAACACTCGA
CATAATAGTAAATACAAGTATCATATTTCGCTCCATGTCTTGAGATGTCG
AACCGAAAGTATAAATTCATGAATAGTAGGTAACAGATGCTGCAACTAGA
AGTAAAGCCTATTGATGAAAGAAATTCTGCTGTAAAAGCAAAACTGTCAT
AAAAGCTCAAAGTCAAGAGGAAATCAATCACACAACTTGGTAGTTTTCTG
TTATCAACTGTGATCTCTGAGCATATTTGGGAATATTACCACCCTTAAGC
GGTATGATGTTCGTAACCTTCAGGTCACTAAAAGTCTCAGTTGCCGTAAA
GCGAACTGAAATGGGAAAGAATGCTGACGAATCTGCTTGTGGAACAACAA
ACTCCATCGACCCACTGCGATTTGAATTATCAATCAGAAGGACAGACCAC
TCCAAAATGGAATTCCTAGAGTCATACCTCCATTCTCCATCAATCTGACT
AACAGATGGTGCTTCTCGAAGAGCTGGAAGAGGTACCTGCCCGGGCGGCC
GCTCG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport
GO:0016192	vesicle-mediated transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030131	clathrin adaptor complex

Vocabulary: **INTERPRO**
Term	Definition
IPR008968	Clathrin adaptor, mu subunit, C-terminal

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Cicer_arietinum_v1_Contig420