Cicer_arietinum_v1_Contig428
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig428 vs. TrEMBL
Match: C6SY67_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.973e-13 Identity = 35/57 (61.40%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 17 MKKTVGAVMILFLIFSQMESVDPSSADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MKK V A+M+ LI +QM+SV+P +ADC D C+TA VQ D+RL RCE KC IRCGP Sbjct: 1 MKKMVAAMMLFLLISTQMKSVEPDAADCSDGCSTACVQSDSRLQARCERKCSIRCGP 57
BLAST of Cicer_arietinum_v1_Contig428 vs. TrEMBL
Match: C6SXB9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.847e-11 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 2 Query: 38 VMILFLIFSQMESVDPSSADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 ++I LI +QMESV+P + DCLD CTTA VQ D+RL RC+ KC IRCGP Sbjct: 1 MLIFLLISTQMESVEPDAVDCLDGCTTACVQSDSRLQARCDRKCSIRCGP 50
BLAST of Cicer_arietinum_v1_Contig428 vs. TrEMBL
Match: B9ICJ2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_666830 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.413e-10 Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 2 Query: 14 MMKKTVGAVMILFLIFSQMESVDPSSADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MM+K + AV+I+ ++ S E+V ++DC DACTT VQ +TRLM+RCE KC IRCGP Sbjct: 1 MMRKILVAVLIVSMVASHFENVASDASDCNDACTTGCVQSNTRLMRRCEIKCGIRCGP 58
BLAST of Cicer_arietinum_v1_Contig428 vs. TrEMBL
Match: B9ICJ4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_575561 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.112e-10 Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = 2 Query: 14 MMKKTVGAVMILFLIFSQMESVDPSSADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MM+K + AV+I+ ++ S E+V ++DC+DACTT VQ +TRL RC+ KC IRCGP Sbjct: 1 MMRKVLVAVLIVSMVASHFENVASDASDCMDACTTGCVQSNTRLTSRCDIKCGIRCGP 58
BLAST of Cicer_arietinum_v1_Contig428 vs. TrEMBL
Match: B9ICH8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_666826 PE=4 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.160e-10 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 2 Query: 14 MMKKTVGAVMILFLIFSQMESVDPSSADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MM+K + AV+I+ ++ S E+V ++DC DACTT VQ +TRL++RC+ KC IRCGP Sbjct: 1 MMRKILVAVLIVSMVASHFENVASDASDCDDACTTGCVQSNTRLLRRCDIKCGIRCGP 58
BLAST of Cicer_arietinum_v1_Contig428 vs. TrEMBL
Match: B9P5Z6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_591429 PE=4 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.665e-9 Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 14 MMKKTVGAVMILFLIFSQMESVDPSSADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MM+K + AV+I+ ++ S E+V ++DC DACTT VQ +TRL RC+ KC IRCGP Sbjct: 1 MMRKILVAVLIVSMVASHFENVASDASDCDDACTTGCVQSNTRLSSRCDIKCGIRCGP 58
BLAST of Cicer_arietinum_v1_Contig428 vs. TAIR peptide
Match: AT1G25275.3 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8860719-8861156 FORWARD LENGTH=85) HSP 1 Score: 54.6842 bits (130), Expect = 1.958e-8 Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 2 Query: 14 MMKKTV---GAVMILFLIFSQMESVDPSS---ADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MMKK V A++I+ + S + V + DC D C+TA VQRD R RC+ KC IRCGP Sbjct: 1 MMKKQVTIVAALLIMMALCSSLNMVAEAQLGPGDCYDGCSTACVQRDPRKTSRCDRKCSIRCGP 64
BLAST of Cicer_arietinum_v1_Contig428 vs. TAIR peptide
Match: AT1G25275.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 18 Blast hits to 18 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8860719-8861156 FORWARD LENGTH=74) HSP 1 Score: 54.6842 bits (130), Expect = 1.958e-8 Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 2 Query: 14 MMKKTV---GAVMILFLIFSQMESVDPSS---ADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MMKK V A++I+ + S + V + DC D C+TA VQRD R RC+ KC IRCGP Sbjct: 1 MMKKQVTIVAALLIMMALCSSLNMVAEAQLGPGDCYDGCSTACVQRDPRKTSRCDRKCSIRCGP 64
BLAST of Cicer_arietinum_v1_Contig428 vs. TAIR peptide
Match: AT1G25275.2 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr1:8860719-8861156 FORWARD LENGTH=74) HSP 1 Score: 52.7582 bits (125), Expect = 7.439e-8 Identity = 28/64 (43.75%), Postives = 36/64 (56.25%), Query Frame = 2 Query: 14 MMKKTV---GAVMILFLIFSQMESVDPSS---ADCLDACTTARVQRDTRLMQRCEGKCQIRCGP 187 MMKK V A++I+ + S + V + DC D C+TA VQRD RC+ KC IRCGP Sbjct: 1 MMKKQVTIVAALLIMMALCSSLNMVAEAQLGPGDCYDGCSTACVQRDREKTSRCDRKCSIRCGP 64 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig428 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 6
BLAST of Cicer_arietinum_v1_Contig428 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig428 ID=Cicer_arietinum_v1_Contig428; Name=Cicer_arietinum_v1_Contig428; organism=Cicer arietinum; type=contig; length=405bpback to top |