Cicer_arietinum_v1_Contig447
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: B9RM05_RICCO (Cohesin subunit rad21, putative OS=Ricinus communis GN=RCOM_1076750 PE=4 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.177e-17 Identity = 50/90 (55.56%), Postives = 63/90 (70.00%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGF-SVEKAKDQESYSKTSTCPGG 339 L+ TEDIRR+RKKAPCTR EILMIQRQFLED+IF EP+ T +SA LT + +E FD SGI+VC+ + S+E D+ S + GG Sbjct: 722 LTNTEDIRRLRKKAPCTRTEILMIQRQFLEDEIFSEPVLTGMSAYLTRMHSEAFDWSGIKVCENDDNNMASLEVVNDEHSARQIVKQDGG 811
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: B9HHZ7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820452 PE=4 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.301e-16 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGFSVEKAKD 300 L+ TEDIRR+RKKAPCTR EILMIQRQ L+++IF EP+ T +SA+LT L +ETFDLS IE+ D + SV AKD Sbjct: 698 LTNTEDIRRIRKKAPCTRTEILMIQRQSLDEEIFSEPVLTGMSAELTCLHSETFDLSRIEIDDNDDNNASV-VAKD 772
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: B9HYG2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_724314 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.220e-16 Identity = 45/76 (59.21%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGFSVEKAKD 300 L+ TEDIRR+RKKAPCTR EIL IQRQ L+++IF EP+ T +SA+LT L++ETFDLS I++ + + S E AKD Sbjct: 586 LTNTEDIRRLRKKAPCTRTEILTIQRQSLDEEIFSEPVLTGMSAELTCLQSETFDLSRIDLAENDDNNTSSEVAKD 661
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: D7SYP7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_220.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00004000001 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.899e-16 Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGFSVEKAKDQE 306 L+ TEDIRRVRKKAPCTR EI MIQ+QFLED+IF EPI T +SA+L L NET+DLS + V + + S E AK+ E Sbjct: 698 LTSTEDIRRVRKKAPCTRLEIWMIQKQFLEDEIFSEPISTGMSAELMSLYNETYDLSTVRVFE---NNASSEVAKEME 772
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: Q8W1Y0_ARATH (RAD21-3 OS=Arabidopsis thaliana GN=At5g16270 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.031e-13 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGFSVEKAKDQE 306 L+ TEDIRRVRKKAPCT EI+M+QRQ LED +F+EPIFT +S +L L E +DL GI + + SV +D E Sbjct: 578 LTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEPIFTGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNE 655
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: D7M830_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_909607 PE=4 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.031e-13 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGFSVEKAKDQE 306 L+ TEDIRRVRKKAPCT EI+M+QRQ LED + +EPIFT +S +L L NE +DL GI + + SV +D E Sbjct: 581 LTNTEDIRRVRKKAPCTIPEIVMLQRQALEDGLLKEPIFTGMSVELVSLHNEPYDLRGIMIIENDDHHASVGVVEDNE 658
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: Q9LF01_ARATH (Putative uncharacterized protein T21H19_190 OS=Arabidopsis thaliana GN=T21H19_190 PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.646e-11 Identity = 41/78 (52.56%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGFSVEKAKDQE 306 L+ TEDIRRVRKKAPCT EI+M+QRQ LED +F+EPIFT +L L E +DL GI + + SV +D E Sbjct: 571 LTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEPIFT---VELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNE 645
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: C5XFD5_SORBI (Putative uncharacterized protein Sb03g042710 OS=Sorghum bicolor GN=Sb03g042710 PE=4 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.820e-10 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 82 TEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFD 237 TEDIRR+RKKAPCTR EI MI++ LED IF EPIF+ LS +L L N T++ Sbjct: 642 TEDIRRIRKKAPCTRSEIWMIEKGSLEDDIFHEPIFSCLSEELNELHNRTYE 693
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: C0PFB6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.820e-10 Identity = 33/52 (63.46%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 82 TEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFD 237 TEDIRR+RKKAPCTR EI MI++ LED IF EPIF+ LS +L L N T++ Sbjct: 646 TEDIRRIRKKAPCTRSEIWMIEKGSLEDDIFHEPIFSCLSEELNKLHNRTYE 697
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Match: Q7XYH6_ORYSI (Cohesin-like protein OS=Oryza sativa subsp. indica GN=OsI_04789 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.433e-9 Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDL 240 L TEDIRR+RKKAPCTR EI MI++ LED IF EPIF+ + +L L+ T+++ Sbjct: 634 LISTEDIRRIRKKAPCTRSEIWMIEKGSLEDDIFHEPIFSCMCKELNDLQYRTYEI 689
BLAST of Cicer_arietinum_v1_Contig447 vs. TAIR peptide
Match: AT5G16270.1 (| Symbols: ATRAD21.3, SYN4 | sister chromatid cohesion 1 protein 4 | chr5:5316783-5322330 FORWARD LENGTH=1031) HSP 1 Score: 79.7221 bits (195), Expect = 3.988e-16 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 73 LSCTEDIRRVRKKAPCTRHEILMIQRQFLEDKIFQEPIFTDLSADLTILRNETFDLSGIEVCDYGLDGFSVEKAKDQE 306 L+ TEDIRRVRKKAPCT EI+M+QRQ LED +F+EPIFT +S +L L E +DL GI + + SV +D E Sbjct: 578 LTNTEDIRRVRKKAPCTVPEIVMLQRQALEDGLFKEPIFTGMSVELVSLHTEPYDLRGIMIIENDDRHASVGAVEDNE 655 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig447 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of Cicer_arietinum_v1_Contig447 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig447 ID=Cicer_arietinum_v1_Contig447; Name=Cicer_arietinum_v1_Contig447; organism=Cicer arietinum; type=contig; length=343bpback to top |