Cicer_arietinum_v1_Contig451

Contig Overview


Name	Cicer_arietinum_v1_Contig451
Unique Name	Cicer_arietinum_v1_Contig451
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	563

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
HO067566	EST	HO067566:1..184 +
HO065686	EST	HO065686:3..563 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
KEGG analysis for Cicer arietinum unigene v1	2011-01-05
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO067566	HO067566	Cicer arietinum	EST
HO065686	HO065686	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: U520_HUMAN (U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens GN=SNRNP200 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.084e-38
Identity = 73/131 (55.73%), Postives = 100/131 (76.34%), Query Frame = -3

Query:  145 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGDDS 537
            R CNR+PNI+LSYE++D D++R+G  + + V LER+ E     GPV AP +P+ +EEGWW+V+GD K+N L++IKR++LQ+K K KL+F APA  G  +Y LYFM D+YMGCDQEY F++DVKEA+   DS
Sbjct: 2009 RFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLEREEE---VTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPA-TGAHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDS 2135

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: U520_DROME (Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Drosophila melanogaster GN=CG5931 PE=2 SV=4)

HSP 1 Score: 145.976 bits (367), Expect = 1.230e-34
Identity = 67/131 (51.15%), Postives = 95/131 (72.52%), Query Frame = -3

Query:  145 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGDDS 537
            R CNR+PNI+L+YE++D D + +G  + + V LER+ E     GPV AP +P+ +EEGWW+V+GD KTN LL+IKR++LQ+K K KL+F AP+  GK  Y LY+M DSY+GCDQEY F+++V +     +S
Sbjct: 2013 RFCNRYPNIELNYEVVDKDRINSGSTVNVVVQLEREDE---VTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKLDFVAPS-PGKHDYTLYYMSDSYLGCDQEYKFSIEVGDFQSESES 2139

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: HELCL_DICDI (Activating signal cointegrator 1 complex subunit 3-like OS=Dictyostelium discoideum GN=ascc3l PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.154e-24
Identity = 57/139 (41.01%), Postives = 85/139 (61.15%), Query Frame = -3

Query:  136 RFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVD---------APRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGDDSGRE 525
            ++P+ID+SY++ D D++ A   +T+++ +ERDL G  E  P++         AP YPK K  GWW ++GD+K N LLAIKR++  +K K K EF  PA  GK   +LY   DSY GCDQE+   +++  A+  D+   E
Sbjct: 2093 KYPDIDISYQVQDEDDLHADSIMTVEMVIERDL-GDDEENPIEINDSINVVSAPYYPKEKICGWWALIGDSKNNHLLAIKRITFLKKTKVKFEFPTPA-VGKHQLSLYLFSDSYNGCDQEHELNINILPAEIEDEDEDE 2229

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: U520_CAEEL (Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Caenorhabditis elegans GN=Y46G5A.4 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.176e-23
Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = -3

Query:  166 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYP-KTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKE 537
            R CN +P+I+++ E L+ND V + +++ L V+LERD +      PV AP +P K KEEGWWLV+GD+++N LL IKR+ +  K   +L+FAAP   G   + L+F+ DSY+G DQE+     V+E
Sbjct: 2008 RFCNHYPSIEVATE-LENDVVTSNDNLMLAVSLERDNDIDGLAPPVVAPLFPQKRKEEGWWLVIGDSESNALLTIKRLVINEKSSVQLDFAAPR-PGHHKFKLFFISDSYLGADQEFDVAFKVEE 2130

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: BRR2_SCHPO (Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyces pombe GN=brr2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.251e-19
Identity = 56/122 (45.90%), Postives = 72/122 (59.02%), Query Frame = -3

Query:  166 NRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVG-PVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKE 528
            N++P+ID+ +EI D+++V A     L V L R+LE   EV   V AP +P  K E WWLV+ D KT  LLAIK+++L R L  K+EF  PA  G   Y L    DSYMG D E  F  +V E
Sbjct: 2048 NKYPDIDIDFEIEDSEDVHANSPSVLIVQLTRELEEDEEVDTTVIAPYFPAQKTEHWWLVISDDKT--LLAIKKITLGRSLTTKMEFVPPA-MGTLKYKLSCFSDSYMGVDYEKEFECNVLE 2166

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: BRR2_YEAST (Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces cerevisiae GN=BRR2 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 9.789e-16
Identity = 43/121 (35.54%), Postives = 75/121 (61.98%), Query Frame = -3

Query:  169 NRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKA-KLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVK 528
            N +PN++L+Y + ++D++ +G    + + L RD+E   E   V + +YP  K E WWLV+G+     L AIK+V+L ++ +  +LEF  P  +GK +  ++ +CDSY+  D+E  F ++VK
Sbjct: 2046 NNYPNVELTYSLNNSDSLISGVKQKITIQLTRDVE--PENLQVTSEKYPFDKLESWWLVLGEVSKKELYAIKKVTLNKETQQYELEFDTPT-SGKHNLTIWCVCDSYLDADKELSFEINVK 2163

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: HELC1_HUMAN (Activating signal cointegrator 1 complex subunit 3 OS=Homo sapiens GN=ASCC3 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 4.113e-14
Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = -3

Query:  163 VRAGEDITLQVTLERDL----EGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVS-LQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEA 477
            + A ++  LQV+L+R      +GK E   V  PR+PK+K+EGW+L++G+     L+A+KRV  ++    A L F  P   G+  Y LYFM D Y+G DQ+Y   L+V +A
Sbjct: 2074 LHADQEYVLQVSLQRVHFGFHKGKPESCAV-TPRFPKSKDEGWFLILGEVDKRELIALKRVGYIRNHHVASLSFYTPEIPGRYIYTLYFMSDCYLGLDQQYDIYLNVTQA 2182

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: SEC63_PONAB (Translocation protein SEC63 homolog OS=Pongo abelii GN=SEC63 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 5.752e-8
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = -3

Query:  163 LQVTLERD----LEGKTEVG-PVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKR--VSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEA 453
            LQ +++R     LE K+++  PV +  +P+ K+E WWL + D K   L+++     +L+   + +L+F AP   G   Y ++   DSYMG DQ     L+V EA
Sbjct:  617 LQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEA 720

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: SEC63_MOUSE (Translocation protein SEC63 homolog OS=Mus musculus GN=Sec63 PE=1 SV=3)

HSP 1 Score: 57.3806 bits (137), Expect = 5.752e-8
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = -3

Query:  163 LQVTLERD----LEGKTEVG-PVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKR--VSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEA 453
            LQ +++R     LE K+++  PV +  +P+ K+E WWL + D K   L+++     +L+   + +L+F AP   G   Y ++   DSYMG DQ     L+V EA
Sbjct:  616 LQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEA 719

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Match: SEC63_HUMAN (Translocation protein SEC63 homolog OS=Homo sapiens GN=SEC63 PE=1 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 5.752e-8
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = -3

Query:  163 LQVTLERD----LEGKTEVG-PVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKR--VSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEA 453
            LQ +++R     LE K+++  PV +  +P+ K+E WWL + D K   L+++     +L+   + +L+F AP   G   Y ++   DSYMG DQ     L+V EA
Sbjct:  616 LQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEA 719

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: B9IFA9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_776276 PE=4 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.854e-60
Identity = 111/135 (82.22%), Postives = 121/135 (89.63%), Query Frame = -3

Query:  136 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD-DSGRE 537
            R CNRFPNID+SYE++D DNVRAGEDITL VTLERDLEG+TEVGPVD+PRYPK KEEGWWLVVGDTK+N LLAIKRVSLQRK K KLEFAAPAD G+KSY LYFMCDSY+GCDQEY F++DV EA G D DSGRE
Sbjct: 2023 RFCNRFPNIDMSYEVMDGDNVRAGEDITLLVTLERDLEGRTEVGPVDSPRYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPADTGRKSYTLYFMCDSYLGCDQEYNFSVDVGEAAGPDEDSGRE 2157

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: B9RY79_RICCO (U520, putative OS=Ricinus communis GN=RCOM_0811130 PE=4 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.062e-56
Identity = 102/130 (78.46%), Postives = 116/130 (89.23%), Query Frame = -3

Query:  148 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGDD 537
            R CNRFPNID+SYE++D ++VR G+DITLQVTLERDLEG+TEVGPVDA RYPK KEEGWWLVVGDTK+N LLAIKRVSLQRK K KLEFAAP++ G+KSY LYFMCDSY+GCDQEY F +DVKEA G D+
Sbjct: 1679 RFCNRFPNIDMSYEVMDGEDVRMGDDITLQVTLERDLEGRTEVGPVDAARYPKAKEEGWWLVVGDTKSNQLLAIKRVSLQRKSKVKLEFAAPSETGRKSYTLYFMCDSYLGCDQEYSFNVDVKEAGGPDE 1808

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: B9I3Q9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_773179 PE=4 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.002e-55
Identity = 104/130 (80.00%), Postives = 115/130 (88.46%), Query Frame = -3

Query:  148 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGDD 537
            R CN+FPNID+SYE++D DNVRAGEDITL VTL RDLEG TEVGPVDAPRYPK KEEGWWLVVGDTK+N+LLAIKRVSLQRK K KLEFAAP DAG+ SY LYFMCDSY+GCDQEY F++DV EA G D+
Sbjct: 2042 RFCNQFPNIDMSYEVMDGDNVRAGEDITLLVTLARDLEG-TEVGPVDAPRYPKPKEEGWWLVVGDTKSNLLLAIKRVSLQRKSKVKLEFAAPTDAGRMSYTLYFMCDSYLGCDQEYNFSVDVGEAAGPDE 2170

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: A5BZG5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042645 PE=4 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.415e-55
Identity = 99/130 (76.15%), Postives = 116/130 (89.23%), Query Frame = -3

Query:  148 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGDD 537
            R CNRFPNID +YE+LD++N+RAG+DITLQV LERDLEG+TEVG VDAPRYPK KEEGWWLVVGDTK+N LLAIKRV+LQRK K KLEFA PA+AG+KSY LYFMCDSY+GCDQEY F++DV +A G ++
Sbjct: 2013 RFCNRFPNIDXTYEVLDSENLRAGDDITLQVMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSNQLLAIKRVALQRKSKVKLEFAVPAEAGRKSYTLYFMCDSYLGCDQEYSFSVDVMDASGPEE 2142

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: Q93YW2_ARATH (Putative ATP-dependent RNA helicase (Fragment) OS=Arabidopsis thaliana GN=At2g42270 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.874e-53
Identity = 95/129 (73.64%), Postives = 112/129 (86.82%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+DITLQV LERD+EG+TEVGPVDAPRYPKTKEEGWWLVVG+ KTN L+AIKR+SLQRK + KLEFA P + G+KSY LYFMCDSY+GCDQEY FT+DVK++D  D
Sbjct:  485 RFCNRFPNIDLTYEIVGSNEVSPGKDITLQVLLERDMEGRTEVGPVDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYSFTVDVKDSDAAD 613

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: O48534_ARATH (Putative ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g42270 PE=4 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.874e-53
Identity = 95/129 (73.64%), Postives = 112/129 (86.82%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+DITLQV LERD+EG+TEVGPVDAPRYPKTKEEGWWLVVG+ KTN L+AIKR+SLQRK + KLEFA P + G+KSY LYFMCDSY+GCDQEY FT+DVK++D  D
Sbjct: 2040 RFCNRFPNIDLTYEIVGSNEVSPGKDITLQVLLERDMEGRTEVGPVDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYSFTVDVKDSDAAD 2168

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: Q9SYP1_ARATH (F9H16.5 protein OS=Arabidopsis thaliana GN=At1g20960 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.706e-52
Identity = 94/129 (72.87%), Postives = 113/129 (87.60%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+++TLQV LERD+EG+TEVGPVD+ RYPKTKEEGWWLVVGDTKTN LLAIKRVSLQRK+K KL+F AP++ G+KSY LYFMCDSY+GCDQEY F++DVK +  GD
Sbjct: 2039 RFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 2167

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: Q8W577_ARATH (At1g20960/F9H16_5 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.706e-52
Identity = 94/129 (72.87%), Postives = 113/129 (87.60%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+++TLQV LERD+EG+TEVGPVD+ RYPKTKEEGWWLVVGDTKTN LLAIKRVSLQRK+K KL+F AP++ G+KSY LYFMCDSY+GCDQEY F++DVK +  GD
Sbjct:  437 RFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 565

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: D7KJW4_ARALY (EMB1507 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_472334 PE=4 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.907e-51
Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+++TLQV LERD+EG+TEVGPVD+ RYPKTKEEGWWLVVGDTKTN LLAIKRVSLQ+K K KL+F  P++ G+KSY LYFMCDSY+GCDQEY F++DVK +  GD
Sbjct: 2039 RFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQQKAKVKLDFTVPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 2167

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Match: D7LM54_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_347259 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.623e-50
Identity = 90/129 (69.77%), Postives = 109/129 (84.50%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CN FPNIDL+YE++ ++ V  G+++TLQV LERD+EGKTEVGPV++ RYPKTKEEGWWLVVGDTKTN LLAIKRVSLQR +K KL F  P++ G+KSY LYFMCDSY+GCDQEY F++DVK +  GD
Sbjct: 1065 RFCNHFPNIDLTYEVMGSEEVTPGKEVTLQVMLERDMEGKTEVGPVESLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRNVKVKLAFTVPSELGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGVGD 1193

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide
Match: AT2G42270.1 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr2:17604330-17610848 FORWARD LENGTH=2172)

HSP 1 Score: 212.231 bits (539), Expect = 1.493e-55
Identity = 95/129 (73.64%), Postives = 112/129 (86.82%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+DITLQV LERD+EG+TEVGPVDAPRYPKTKEEGWWLVVG+ KTN L+AIKR+SLQRK + KLEFA P + G+KSY LYFMCDSY+GCDQEY FT+DVK++D  D
Sbjct: 2040 RFCNRFPNIDLTYEIVGSNEVSPGKDITLQVLLERDMEGRTEVGPVDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYSFTVDVKDSDAAD 2168

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide
Match: AT1G20960.2 (| Symbols: emb1507 | U5 small nuclear ribonucleoprotein helicase, putative | chr1:7302591-7309914 REVERSE LENGTH=2171)

HSP 1 Score: 208.379 bits (529), Expect = 2.155e-54
Identity = 94/129 (72.87%), Postives = 113/129 (87.60%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+++TLQV LERD+EG+TEVGPVD+ RYPKTKEEGWWLVVGDTKTN LLAIKRVSLQRK+K KL+F AP++ G+KSY LYFMCDSY+GCDQEY F++DVK +  GD
Sbjct: 2039 RFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 2167

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide
Match: AT1G20960.1 (| Symbols: emb1507 | U5 small nuclear ribonucleoprotein helicase, putative | chr1:7302591-7309914 REVERSE LENGTH=2171)

HSP 1 Score: 208.379 bits (529), Expect = 2.155e-54
Identity = 94/129 (72.87%), Postives = 113/129 (87.60%), Query Frame = -3

Query:  151 RVCNRFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 537
            R CNRFPNIDL+YEI+ ++ V  G+++TLQV LERD+EG+TEVGPVD+ RYPKTKEEGWWLVVGDTKTN LLAIKRVSLQRK+K KL+F AP++ G+KSY LYFMCDSY+GCDQEY F++DVK +  GD
Sbjct: 2039 RFCNRFPNIDLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSGAGD 2167

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide
Match: AT5G61140.2 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2157)

HSP 1 Score: 73.1738 bits (178), Expect = 1.082e-13
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = -3

Query:  190 RFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEY 525
            RFP I ++  +   D+    +  TL++ LE+    K       APR+PK K+E WWLV+GDT T+ L A+KRVS   +L  ++E   P     +   L  + D Y+G +QE+
Sbjct: 2040 RFPRIQMNVRLQKKDSDGKKKPSTLEIRLEKT--SKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMEL-PPNITSFQDTKLILVSDCYLGFEQEH 2148

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide
Match: AT5G61140.1 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2146)

HSP 1 Score: 73.1738 bits (178), Expect = 1.082e-13
Identity = 40/112 (35.71%), Postives = 61/112 (54.46%), Query Frame = -3

Query:  190 RFPNIDLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEY 525
            RFP I ++  +   D+    +  TL++ LE+    K       APR+PK K+E WWLV+GDT T+ L A+KRVS   +L  ++E   P     +   L  + D Y+G +QE+
Sbjct: 2029 RFPRIQMNVRLQKKDSDGKKKPSTLEIRLEKT--SKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMEL-PPNITSFQDTKLILVSDCYLGFEQEH 2137

[Close]

BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide
Match: AT3G28870.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Sec63 domain (InterPro:IPR004179); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24260.1); Has 531 Blast hits to 527 proteins in 118 species: Archae - 0; Bacteria - 10; Metazoa - 251; Fungi - 29; Plants - 170; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink). | chr3:10890355-10891839 FORWARD LENGTH=355)

HSP 1 Score: 70.4774 bits (171), Expect = 7.014e-13
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = -3

Query:  151 KRVSLQRKLKAKLEFAAPADAGKKSYALYFMCDSYMGCDQEYGFTLDVKEADGGD 315
            K +  + K K KL+F  P++ G+KSY LYFMCDSY+GCDQEY F++D K +  GD
Sbjct:  297 KGLGQELKAKVKLDFTVPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDDKGSGVGD 351

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig451 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
U520_HUMAN	4.084e-38	55.73	U5 small nuclear ribonucleoprotein 200 kDa helicas...	[more]
U520_DROME	1.230e-34	51.15	Putative U5 small nuclear ribonucleoprotein 200 kD...	[more]
HELCL_DICDI	1.154e-24	41.01	Activating signal cointegrator 1 complex subunit 3...	[more]
U520_CAEEL	2.176e-23	44.80	Putative U5 small nuclear ribonucleoprotein 200 kD...	[more]
BRR2_SCHPO	3.251e-19	45.90	Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyc...	[more]
BRR2_YEAST	9.789e-16	35.54	Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces c...	[more]
HELC1_HUMAN	4.113e-14	40.00	Activating signal cointegrator 1 complex subunit 3...	[more]
SEC63_PONAB	5.752e-8	33.65	Translocation protein SEC63 homolog OS=Pongo abeli...	[more]
SEC63_MOUSE	5.752e-8	33.65	Translocation protein SEC63 homolog OS=Mus musculu...	[more]
SEC63_HUMAN	5.752e-8	33.65	Translocation protein SEC63 homolog OS=Homo sapien...	[more]

BLAST of Cicer_arietinum_v1_Contig451 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9IFA9_POPTR	7.854e-60	82.22	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RY79_RICCO	1.062e-56	78.46	U520, putative OS=Ricinus communis GN=RCOM_0811130...	[more]
B9I3Q9_POPTR	2.002e-55	80.00	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BZG5_VITVI	3.415e-55	76.15	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q93YW2_ARATH	1.874e-53	73.64	Putative ATP-dependent RNA helicase (Fragment) OS=...	[more]
O48534_ARATH	1.874e-53	73.64	Putative ATP-dependent RNA helicase OS=Arabidopsis...	[more]
Q9SYP1_ARATH	2.706e-52	72.87	F9H16.5 protein OS=Arabidopsis thaliana GN=At1g209...	[more]
Q8W577_ARATH	2.706e-52	72.87	At1g20960/F9H16_5 OS=Arabidopsis thaliana PE=2 SV=...	[more]
D7KJW4_ARALY	3.907e-51	71.32	EMB1507 OS=Arabidopsis lyrata subsp. lyrata GN=ARA...	[more]
D7LM54_ARALY	9.623e-50	69.77	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of Cicer_arietinum_v1_Contig451 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 6


Match Name	E-value	Identity	Description
AT2G42270.1	1.493e-55	73.64	\| Symbols: \| U5 small nuclear ribonucleoprotein h...	[more]
AT1G20960.2	2.155e-54	72.87	\| Symbols: emb1507 \| U5 small nuclear ribonucleopr...	[more]
AT1G20960.1	2.155e-54	72.87	\| Symbols: emb1507 \| U5 small nuclear ribonucleopr...	[more]
AT5G61140.2	1.082e-13	35.71	\| Symbols: \| U5 small nuclear ribonucleoprotein h...	[more]
AT5G61140.1	1.082e-13	35.71	\| Symbols: \| U5 small nuclear ribonucleoprotein h...	[more]
AT3G28870.1	7.014e-13	54.55	\| Symbols: \| CONTAINS InterPro DOMAIN/s: Histone ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 46..60 score
None	No IPR available	SEG	seg	seg	coord: 46..53 score
None	No IPR available	GENE3D	2.60.40.150	no description	coord: 15..135 score: 9.2
None	No IPR available	PANTHER	PTHR11752	HELICASE SKI2W	coord: 9..140 score: 3.7
None	No IPR available	PANTHER	PTHR11752:SF7	U520	coord: 9..140 score: 3.7
None	No IPR available	SEG	seg	seg	coord: 6..12 score
IPR004179	Sec63 domain	PFAM	PF02889	Sec63	coord: 9..127 score: 6.4

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig451 ID=Cicer_arietinum_v1_Contig451; Name=Cicer_arietinum_v1_Contig451; organism=Cicer arietinum; type=contig; length=563bp
TTCGAGCGGACGCCCGGGCCCTTACATCTCCTTGTGTTACTTCTTGCCCA
ATTACTTCCTTACCAAAACAAAACAAACAAAAAATCAGCATGGAAGTATT
ATACTTCTCATTTGTAGCTTACATGAAAATTTTCATTCACGGCCACTGTC
ATCACCACCATCTGCCTCCTTAACATCAAGGGTGAAACCATACTCCTGAT
CACAACCCATGTAAGAATCGCACATGAAGTAGAGGGCATAGGATTTTTTC
CCAGCATCAGCAGGAGCAGCAAACTCCAGTTTGGCTTTCAACTTCCGCTG
CAACGACACCCGCTTAATTGCAAGCAACATGTTGGTTTTGGTATCACCAA
CAACAAGCCACCACCCTTCCTCCTTGGTTTTTGGATACCTAGGAGCATCA
ACAGGTCCTACTTCAGTTTTACCCTCGAGATCCCGCTCAAGAGTGACCTG
TAGTGTTATATCCTCCCCAGCTCGCACATTGTCATTGTCCAGGATCTCAT
ATGACAAATCTATATTAGGAAAGCGATTGCAAACCCGCGTACCTGCCCGG
GCGGCCGCTCGAA

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR004179	Sec63-dom

Search form

Cicer_arietinum_v1_Contig451