Cicer_arietinum_v1_Contig465

Contig Overview
NameCicer_arietinum_v1_Contig465
Unique NameCicer_arietinum_v1_Contig465
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length515
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
HO067486ESTHO067486:1..515 +Cicer arietinum unigene v1n/a
HO067487ESTHO067487:38..510 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
HO067486HO067486Cicer arietinumEST
HO067487HO067487Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig465 vs. SwissProt
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.308e-10
Identity = 41/95 (43.16%), Postives = 49/95 (51.58%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            GT C   PC     PP+++       DI T    + I D ADS CA  NFY+ DAFL AL+SY  FGR    +DS   I  AFAH+  E G   Y
Sbjct:   48 GTGCQQGPCTTASPPPSNNVN----ADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCY 138          
BLAST of Cicer_arietinum_v1_Contig465 vs. SwissProt
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 3.015e-7
Identity = 34/85 (40.00%), Postives = 40/85 (47.06%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAH 261
            GT C   PC          T DV+V  I TP+ F  +   AD  CA   FY+ DAFL A   Y  FGR   ++DS   I   FAH
Sbjct:   50 GTGCQAGPC------DVPATNDVSVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAH 128          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: B8Y647_MEDSA (Class IV chitinase OS=Medicago sativa GN=Chi PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.648e-15
Identity = 45/95 (47.37%), Postives = 54/95 (56.84%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            GT C   PC+  Q PP+    D  V DI T   F+ I D ADS CA  NFY+  AFLDAL+SY+ FGR   L+DS   +  AFAH+  E G   Y
Sbjct:   57 GTGCKQGPCYAGQTPPSLPNNDANVADILTQDFFNSIIDQADSSCAGKNFYTRAAFLDALNSYNQFGRSGSLDDSKREVAAAFAHFTHETGHFCY 151          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: Q6RV28_MEDTR (Class IV chitinase OS=Medicago truncatula GN=chit4 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.458e-15
Identity = 45/95 (47.37%), Postives = 54/95 (56.84%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            GT C   PC+  Q PP+    D  V DI T   F+RI D ADS CA  NFY+  AFLDAL+SY+ FGR   L+ S   +  AFAH+  E G   Y
Sbjct:   57 GTGCKQGPCYAGQTPPSLPNNDANVADILTQDFFNRIIDQADSSCAGKNFYTRAAFLDALNSYNQFGRSGSLDGSKREVAAAFAHFTHETGHFCY 151          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: B9N605_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1116414 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.898e-13
Identity = 47/95 (49.47%), Postives = 54/95 (56.84%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            GT C    CF     P + T DV+VPDI TP+ F  I D ADS CA  NFYS DAFL+AL+SY  FGR   ++DS   I   FAH   E G   Y
Sbjct:   55 GTGCQEGQCF-----PAAPTNDVSVPDIVTPEFFGGILDQADSSCAGKNFYSRDAFLEALNSYSRFGRIGSVDDSRREIAAFFAHVTHETGHFCY 144          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: C6TK83_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.211e-13
Identity = 45/91 (49.45%), Postives = 52/91 (57.14%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIG 279
            GT C   PC+      N+    V V DI TPQ F  I D ADS CA  NFYS DAFL+AL+SY+ FGR    +DS   I  AFAH+  E G
Sbjct:   52 GTGCKQGPCYSSTPSTNN----VIVADIVTPQFFSGIIDQADSGCAGKNFYSRDAFLNALNSYNDFGRLGSQDDSKREIAAAFAHFTHETG 138          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: Q9M6Q1_MEDTR (Putative chitinase (Fragment) OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.230e-12
Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDS 231
            GT C   PC+  Q PP+    D  V DI T   F+RI D ADS CA  NFY+  AFLDAL+SY+ FGR   L+DS
Sbjct:    7 GTGCKQGPCYAGQTPPSLPNNDANVADILTQDFFNRIIDQADSSCAGKNFYTRAAFLDALNSYNQFGRSGSLDDS 81          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: A5BKN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033610 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.973e-12
Identity = 42/95 (44.21%), Postives = 51/95 (53.68%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            GT C    C+    P ++    + VP + T   FDRI D AD+ CA  NFY+  AFLDAL SY  FGR V ++DSL  I   FAH   E G   Y
Sbjct:   49 GTGCKSGSCYTTPRPSSN----IPVPAVVTEGFFDRIIDQADASCAGKNFYTRAAFLDALKSYPRFGREVYVDDSLYEIAAFFAHVTHETGNFCY 139          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: C6T7J9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.320e-11
Identity = 39/86 (45.35%), Postives = 50/86 (58.14%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHY 264
            G  C   PC+G   P +    DV+V DI T + F+ I D A+  CA  NFYS DAFLDAL +YD F +   ++DS   I  AFAH+
Sbjct:   59 GKGCKEGPCYGTATPND----DVSVADIVTSEFFNAIIDQAEDHCAGKNFYSRDAFLDALIAYDQFAKTGSVDDSKREIAAAFAHF 140          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: B9IQS7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_249950 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.030e-11
Identity = 42/91 (46.15%), Postives = 50/91 (54.95%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIG 279
            GT C   PCF       + T DV+VPDI TP+ F  I D A+S C   +FYS D FL+AL SY  FGR   ++DS   I   FAH   E G
Sbjct:   38 GTGCQEGPCFAP-----APTNDVSVPDIVTPEFFGGILDQANSSCVGKSFYSRDVFLEALGSYSRFGRIGSVDDSRREIAAFFAHVTHETG 123          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: Q7X9F8_9FABA (Class IV chitinase OS=Galega orientalis PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.749e-11
Identity = 41/95 (43.16%), Postives = 53/95 (55.79%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            GT C   PC+G     +S      V DI TP  F+ I + A S CA  NFY+ DAFL+AL+SY+ FG+   L+D+   I  AFAH+  E G   Y
Sbjct:   57 GTGCKQGPCYGSTLSSSS------VADIVTPAFFNGIINQAGSSCAGKNFYTRDAFLNALNSYNQFGKGGSLDDTKREIAAAFAHFTHETGHFCY 145          
BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Match: D7T2B7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_94.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038108001 PE=4 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.815e-11
Identity = 37/74 (50.00%), Postives = 44/74 (59.46%), Query Frame = 1
Query:   70 DVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            ++ VP + T   FDRI D AD+ CA  NFY+  AFLDAL SY  FGR V ++DSL  I   FAH   E G   Y
Sbjct:   80 NIPVPAVVTEGFFDRIIDQADASCAGKNFYTRAAFLDALKSYPRFGREVYVDDSLYEIAAFFAHVTHETGNFCY 153          
BLAST of Cicer_arietinum_v1_Contig465 vs. TAIR peptide
Match: AT3G54420.1 (| Symbols: ATEP3, ATCHITIV, CHIV, EP3 | homolog of carrot EP3-3 chitinase | chr3:20145935-20147034 FORWARD LENGTH=273)

HSP 1 Score: 60.8474 bits (146), Expect = 4.676e-10
Identity = 40/95 (42.11%), Postives = 48/95 (50.53%), Query Frame = 1
Query:    7 GTRCLLIPCFGDQNPPNSHTCDVTVPDIGTPQLFDRITDPADSICARNNFYSLDAFLDALSSYDPFGRPVLLEDSLLMIECAFAHYPIEIGRKFY 291
            G  C   PCF    PP ++   V+V +I T + F+ I   A S CA N FYS  AFL+AL SY  FGR    +DS   I   FAH   E G   Y
Sbjct:   53 GVGCQQGPCFA---PPPAN--GVSVAEIVTQEFFNGIISQAASSCAGNRFYSRGAFLEALDSYSRFGRVGSTDDSRREIAAFFAHVTHETGHFCY 142          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig465 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
CHI4_PHAVU1.308e-1043.16Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE... [more]
CHI6_ORYSJ3.015e-740.00Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
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BLAST of Cicer_arietinum_v1_Contig465 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B8Y647_MEDSA2.648e-1547.37Class IV chitinase OS=Medicago sativa GN=Chi PE=2 ... [more]
Q6RV28_MEDTR3.458e-1547.37Class IV chitinase OS=Medicago truncatula GN=chit4... [more]
B9N605_POPTR1.898e-1349.47Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6TK83_SOYBN7.211e-1349.45Putative uncharacterized protein OS=Glycine max PE... [more]
Q9M6Q1_MEDTR1.230e-1252.00Putative chitinase (Fragment) OS=Medicago truncatu... [more]
A5BKN8_VITVI7.973e-1244.21Putative uncharacterized protein OS=Vitis vinifera... [more]
C6T7J9_SOYBN2.320e-1145.35Putative uncharacterized protein OS=Glycine max PE... [more]
B9IQS7_POPTR3.030e-1146.15Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q7X9F8_9FABA6.749e-1143.16Class IV chitinase OS=Galega orientalis PE=2 SV=1[more]
D7T2B7_VITVI8.815e-1150.00Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of Cicer_arietinum_v1_Contig465 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G54420.14.676e-1042.11| Symbols: ATEP3, ATCHITIV, CHIV, EP3 | homolog of... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000726Glycoside hydrolase, family 19, catalyticPFAMPF00182Glyco_hydro_19coord: 32..87
score: 1
IPR000726Glycoside hydrolase, family 19, catalyticPROSITEPS00773CHITINASE_19_1coord: 47..69
score
NoneNo IPR availableGENE3D1.10.530.10no descriptioncoord: 29..98
score: 7

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig465 ID=Cicer_arietinum_v1_Contig465; Name=Cicer_arietinum_v1_Contig465; organism=Cicer arietinum; type=contig; length=515bp
CGGGCAGGTACACGGTGTCTTCTCATTCCTTGTTTTGGGGACCAAAATCC
ACCTAATTCTCATACCTGTGATGTTACCGTGCCTGACATTGGAACACCTC
AACTCTTTGATCGAATAACTGATCCGGCTGATTCTATCTGTGCCCGAAAT
AATTTTTACTCGCTAGATGCTTTTCTAGATGCCCTCTCTTCTTACGATCC
ATTTGGGAGGCCTGTGTTGCTGGAGGACTCCCTGCTAATGATTGAATGCG
CTTTTGCTCATTACCCAATTGAGATTGGACGTAAGTTTTACGGGTCTATC
TTCTTAGAACATGCCAAATTGTTCCACACAACTTGCCCACAATTCTTGAC
CCTACTGGAAAACATCGGATTTAAATCTATGTCTAGCTGCCTGCTTAACC
AGCCTAATATACCGTGGGCCCTAATTCCATGCCCTCAATTATCCTGCTGC
ACTCATTGGCCAACGCTTACTGGACTATTCTGAGGTATGCAAAAAATAAC
TACATTTTTTATATA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0004568chitinase activity
Vocabulary: Biological Process
TermDefinition
GO:0006032chitin catabolic process
GO:0016998cell wall macromolecule catabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000726Glyco_hydro_19_cat