Cicer_arietinum_v1_Contig514

Contig Overview


Name	Cicer_arietinum_v1_Contig514
Unique Name	Cicer_arietinum_v1_Contig514
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	731

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HO067236	EST	HO067236:1..549 +	Cicer arietinum unigene v1	n/a
HO067235	EST	HO067235:1..549 +	Cicer arietinum unigene v1	n/a
GR398003	EST	GR398003:241..579 +	Cicer arietinum unigene v1	n/a
GR393690	EST	GR393690:146..723 +	Cicer arietinum unigene v1	n/a
HO062280	EST	HO062280:524..718 +	Cicer arietinum unigene v1	n/a
GR392832	EST	GR392832:146..717 +	Cicer arietinum unigene v1	n/a
GR392690	EST	GR392690:146..731 +	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO067236	HO067236	Cicer arietinum	EST
HO067235	HO067235	Cicer arietinum	EST
GR398003	GR398003	Cicer arietinum	EST
GR393690	GR393690	Cicer arietinum	EST
HO062280	HO062280	Cicer arietinum	EST
GR392832	GR392832	Cicer arietinum	EST
GR392690	GR392690	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: Q5I7M1_9FABA (Putative uncharacterized protein (Fragment) OS=Ammopiptanthus mongolicus PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.521e-35
Identity = 82/116 (70.69%), Postives = 86/116 (74.14%), Query Frame = 3

Query:  165 ASFSRSLSSKFCLCRETSTVRFCTKPDT--AQNMDKAQKPNREETKHGDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRHQTNANA 506
            ASF RSLSS   L RET  VRFCT PDT  A  MDK Q P+ E T HGDVM H FGEGY TR DEEGFGGIYG NQ+    + +KSVHENHP YDKTQGSEVKEKEK RHQTN NA
Sbjct:    1 ASFPRSLSSN--LGRETFAVRFCTHPDTDSAHKMDKTQNPSEEAT-HGDVMFHPFGEGYTTRFDEEGFGGIYGGNQT----RPEKSVHENHPAYDKTQGSEVKEKEKARHQTNTNA 109

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: C6TL02_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.053e-33
Identity = 83/127 (65.35%), Postives = 90/127 (70.87%), Query Frame = 3

Query:  126 MVHTIKTFLTYPQASF-SRSLSSKFCLCRETSTVRFCTKPDTAQNMDKAQKPNREETKHGDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRHQTNAN 503
            M H+IKT LT PQ SF +RSLSS   L RET  VRFCT  D+A+ MDK QKP+ EE K GD M HSFGEGYATR DEEGFGG+YG NQ         S  E  P YDKTQGSEVKEKEK RHQT+AN
Sbjct:    1 MFHSIKTVLTCPQVSFPARSLSSN--LGRETCAVRFCT--DSARKMDKTQKPSTEENKQGDTMFHSFGEGYATRSDEEGFGGVYGGNQ---------SKPEMDPAYDKTQGSEVKEKEKARHQTSAN 114

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: B9S6I0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0536860 PE=4 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.683e-29
Identity = 63/93 (67.74%), Postives = 72/93 (77.42%), Query Frame = 3

Query:  228 FCTKPDTAQNMDKAQKPNREETKHGDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRHQTNANA 506
            F + PD   +M+KAQ PN    K GDVMSHSFGEGYATR DEEGFGGIYG NQS+   + DK +HENHP YD +QGSEVKEKEK RHQTNA++
Sbjct:   42 FSSNPDNKHDMEKAQNPNE---KTGDVMSHSFGEGYATRSDEEGFGGIYGGNQSVVKEETDKEIHENHPAYDTSQGSEVKEKEKARHQTNAHS 131

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: D7MLY3_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496922 PE=4 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.967e-28
Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3

Query:  126 MVHTIKTFLTYPQASFSRSLSSKFCLCRETSTVRFCTKPDTAQNMDKAQKPNREETKHGDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRHQTNAN 503
            M++ +K+  + P  +     S    L R+ + V F T  D  Q MDK  KP     K GDVMSHS+GEGYATRCDEEGFGG YG NQ+L   QK+  +HENHPDYDKTQGSE KEKEK R+QT ++
Sbjct:    1 MINALKSIRSLPSNTVY-FFSPPSRLGRKVTGVSFATASDDQQKMDK--KPENPNEKTGDVMSHSYGEGYATRCDEEGFGGTYGGNQTL---QKENEIHENHPDYDKTQGSEAKEKEKARNQTQSH 120

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: Q9FL02_ARATH (AT5g66780/MUD21_2 OS=Arabidopsis thaliana GN=At5g66780 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.127e-27
Identity = 69/126 (54.76%), Postives = 83/126 (65.87%), Query Frame = 3

Query:  126 MVHTIKTFLTYPQASFSRSLSSKFCLCRETSTVRFCTKPDTAQNMDKAQKPNREETKHGDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRHQTNAN 503
            M++  KT  + P  +     S+   L R+ + V F T  D  Q MDK  KP     K GDVMSHS+GEGYATR DEEGFGGIYG NQ+L   QK+  +HENHPDYDKTQGSE KEKEK R+QT ++
Sbjct:    1 MINAFKTIRSLPSNTTVSFCSTPSRLGRKVTGVSFATTSDQ-QKMDK--KPENPNEKTGDVMSHSYGEGYATRSDEEGFGGIYGGNQTL---QKENEIHENHPDYDKTQGSESKEKEKARNQTQSH 120

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: D7SPE9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018974001 PE=4 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.565e-19
Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 3

Query:  126 MVHTIKTFLTYPQ-ASFSRSLSSKFCLCRETSTVRFC-TKPDTAQNMDKA--QKPNREETKHGDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRHQ 491
            M+H     +  PQ A +S  L SK  + R T  VRF  ++P+   +M+K   QK  +  +   D MS SFG  YATR DEEGFGGIYG NQSL   +K+ +  ENH DY++TQGS+VKEKEK RHQ
Sbjct:    1 MMHRAIRSVGAPQPALWSSHLPSK--VGRRTCGVRFRQSEPENQDDMEKIKIQKKEKLSSVERDEMSTSFGVAYATRSDEEGFGGIYGGNQSLGECEKE-TAQENHNDYERTQGSDVKEKEKARHQ 123

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: C5WMW4_SORBI (Putative uncharacterized protein Sb01g009730 OS=Sorghum bicolor GN=Sb01g009730 PE=4 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.381e-17
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 3

Query:  249 AQNMDKAQKPNREETKH---GDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRH 488
            AQ+     K  R +  H   GDVMSHSFGEGY+TR DEEGFGG+YG N  +        +H +HP+YD +QGSEVKEKEK RH
Sbjct:   87 AQDAAAGDKNKRRDDMHKTTGDVMSHSFGEGYSTRSDEEGFGGVYGGNDPV--EHPGTEIHPSHPEYDTSQGSEVKEKEKARH 167

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: Q75GU1_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=OJ1499_D04.17 PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.077e-17
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 3

Query:  240 PDTAQNMDKAQKPNREETKH---GDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRH 488
            P +     + ++ +R++  H   GDVM+HSFGEGY+TR DEEGFGG+YG+N  +        VH +HP+YD +QGSEVKEKEK RH
Sbjct:   82 PPSQPQPQQEKRGSRDDDMHKTTGDVMTHSFGEGYSTRSDEEGFGGVYGQNDPV--FNPGTEVHPSHPEYDTSQGSEVKEKEKARH 165

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: Q53K18_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.077e-17
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 3

Query:  240 PDTAQNMDKAQKPNREETKH---GDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRH 488
            P +     + ++ +R++  H   GDVM+HSFGEGY+TR DEEGFGG+YG+N  +        VH +HP+YD +QGSEVKEKEK RH
Sbjct:   12 PPSQPQPQQEKRGSRDDDMHKTTGDVMTHSFGEGYSTRSDEEGFGGVYGQNDPV--FNPGTEVHPSHPEYDTSQGSEVKEKEKARH 95

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Match: B8AQR0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13342 PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 3.077e-17
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 3

Query:  240 PDTAQNMDKAQKPNREETKH---GDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRH 488
            P +     + ++ +R++  H   GDVM+HSFGEGY+TR DEEGFGG+YG+N  +        VH +HP+YD +QGSEVKEKEK RH
Sbjct:   82 PPSQPQPQQEKRGSRDDDMHKTTGDVMTHSFGEGYSTRSDEEGFGGVYGQNDPV--FNPGTEVHPSHPEYDTSQGSEVKEKEKARH 165

[Close]

BLAST of Cicer_arietinum_v1_Contig514 vs. TAIR peptide
Match: AT5G66780.1 (| Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:26663627-26664196 FORWARD LENGTH=121)

HSP 1 Score: 127.487 bits (319), Expect = 7.443e-30
Identity = 69/126 (54.76%), Postives = 83/126 (65.87%), Query Frame = 3

Query:  126 MVHTIKTFLTYPQASFSRSLSSKFCLCRETSTVRFCTKPDTAQNMDKAQKPNREETKHGDVMSHSFGEGYATRCDEEGFGGIYGENQSLNTNQKDKSVHENHPDYDKTQGSEVKEKEKGRHQTNAN 503
            M++  KT  + P  +     S+   L R+ + V F T  D  Q MDK  KP     K GDVMSHS+GEGYATR DEEGFGGIYG NQ+L   QK+  +HENHPDYDKTQGSE KEKEK R+QT ++
Sbjct:    1 MINAFKTIRSLPSNTTVSFCSTPSRLGRKVTGVSFATTSDQ-QKMDK--KPENPNEKTGDVMSHSYGEGYATRSDEEGFGGIYGGNQTL---QKENEIHENHPDYDKTQGSESKEKEKARNQTQSH 120

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig514 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig514 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q5I7M1_9FABA	9.521e-35	70.69	Putative uncharacterized protein (Fragment) OS=Amm...	[more]
C6TL02_SOYBN	1.053e-33	65.35	Putative uncharacterized protein OS=Glycine max PE...	[more]
B9S6I0_RICCO	2.683e-29	67.74	Putative uncharacterized protein OS=Ricinus commun...	[more]
D7MLY3_ARALY	2.967e-28	53.97	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9FL02_ARATH	1.127e-27	54.76	AT5g66780/MUD21_2 OS=Arabidopsis thaliana GN=At5g6...	[more]
D7SPE9_VITVI	9.565e-19	49.21	Whole genome shotgun sequence of line PN40024, sca...	[more]
C5WMW4_SORBI	1.381e-17	55.42	Putative uncharacterized protein Sb01g009730 OS=So...	[more]
Q75GU1_ORYSJ	3.077e-17	51.16	Expressed protein OS=Oryza sativa subsp. japonica ...	[more]
Q53K18_ORYSJ	3.077e-17	51.16	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AQR0_ORYSI	3.077e-17	51.16	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of Cicer_arietinum_v1_Contig514 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G66780.1	7.443e-30	54.76	\| Symbols: \| unknown protein; Has 1807 Blast hits...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 75..89 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig514 ID=Cicer_arietinum_v1_Contig514; Name=Cicer_arietinum_v1_Contig514; organism=Cicer arietinum; type=contig; length=731bp
CGGGCAGGTACGCGGGGGAAATAGGATGTGAATACATTAGTGTATGATTA
CGGATCCTAATTAACCTCAGTTTCCCCCTGCCGATATTGACTCTTTTGTG
TCCTATAAGTTTGCATACAAAAACAATGGTTCACACAATTAAAACTTTTT
TAACATATCCACAAGCCTCGTTCTCACGCTCACTCTCTTCCAAGTTTTGT
CTTTGTAGGGAAACTTCCACCGTTAGATTTTGCACCAAACCTGATACTGC
CCAGAACATGGACAAGGCTCAGAAGCCTAATAGGGAGGAAACTAAACATG
GGGATGTGATGTCACATTCGTTTGGAGAAGGATATGCTACGAGATGTGAT
GAAGAAGGATTTGGGGGGATATATGGTGAAAACCAATCCCTTAACACCAA
TCAGAAAGATAAGTCCGTCCATGAAAATCATCCAGATTATGACAAGACGC
AAGGAAGCGAGGTGAAAGAGAAGGAAAAAGGGAGGCACCAGACCAATGCC
AACGCTTAGGTTTTTCATGTGTAGACTATAGTACAGTGTGATTTGTGCAA
TATACGCATGTATTAATTTGCTGTTAAGAGTTTTTTATTTTTACTTTCTG
ATCTATTGTTTTTTGTTTTATTGGTTTTTAATTTTTTTGTTTTAGAGTAA
ACAATTCAGATAACTTTGATGTCTTATGTTTGAATTTGAAATTCAACTTA
TCAATTAAGTTAAGATTTAAAAATGATTTTT

Search form

Cicer_arietinum_v1_Contig514