Cicer_arietinum_v1_Contig528

Contig Overview
NameCicer_arietinum_v1_Contig528
Unique NameCicer_arietinum_v1_Contig528
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length642
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR407868ESTGR407868:290..415 +Cicer arietinum unigene v1n/a
GR401652ESTGR401652:60..380 +Cicer arietinum unigene v1n/a
DY475214ESTDY475214:205..459 -Cicer arietinum unigene v1n/a
HO067078ESTHO067078:1..481 +Cicer arietinum unigene v1n/a
GR396729ESTGR396729:120..483 +Cicer arietinum unigene v1n/a
GR401653ESTGR401653:60..642 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR407868GR407868Cicer arietinumEST
GR401652GR401652Cicer arietinumEST
DY475214DY475214Cicer arietinumEST
HO067078HO067078Cicer arietinumEST
GR396729GR396729Cicer arietinumEST
GR401653GR401653Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: Q1SWG9_MEDTR (Heavy metal transport/detoxification protein OS=Medicago truncatula GN=MtrDRAFT_AC134521g45v2 PE=4 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.452e-19
Identity = 58/127 (45.67%), Postives = 77/127 (60.63%), Query Frame = -2 
Query:  180 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXELTDLWKAYESYHNQMRQXXXXXXYRTVEESPN 560
            M K+VLKV+LYDD+IK+KAMK            ++MKD+K+TLIGD+D V+VV KLRKLCHAE++ +G                          EL DL KAYE+Y+N+M+Q      YR+VEESP+
Sbjct:    1 MNKLVLKVDLYDDRIKQKAMKMVSGLSGVEGVSMNMKDKKITLIGDMDPVRVVSKLRKLCHAEIIMIG-----PAKEEKEEEKKEEPKKKVTKEELDDLVKAYETYYNEMKQPYPYQYYRSVEESPS 122
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: C6T3Z9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.962e-16
Identity = 54/111 (48.65%), Postives = 62/111 (55.86%), Query Frame = -2 
Query:  228 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXELTDLWKAYESYHNQMR 560
            M K+VLKVEL+DDKIKKKA+KA           VDMKDQKMT+IGD D V  VGKLRK CHAE++SVG                          E   L K YE+Y+NQ R
Sbjct:    1 MKKVVLKVELHDDKIKKKAVKAVSGISGAESVSVDMKDQKMTIIGDFDPVTAVGKLRKFCHAEILSVG-PAKEEKKEKPKKEDKKPEANKNPKEEYAQLLKIYEAYYNQTR 110
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: Q1SWG8_MEDTR (Heavy metal transport/detoxification protein OS=Medicago truncatula GN=MtrDRAFT_AC134521g46v2 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.170e-15
Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = -2 
Query:  357 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVG 560
            M K+VLKV+LYDD+IK+KAMKA           +DMKD+KMTLIGD+D V VV KLRKLCHAE++ +G
Sbjct:    1 MNKLVLKVDLYDDRIKQKAMKAVSGLSGLDAVSIDMKDKKMTLIGDMDPVSVVSKLRKLCHAEIIMIG 68
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: C6SYA0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.833e-15
Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = -2 
Query:  357 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVG 560
            M K+VLKVE+++DKIK+KAMK            VDMKD+K+T+IGDID VKV  KLRKLCHAE+VSVG
Sbjct:    1 MKKVVLKVEVHEDKIKQKAMKVVSGISGVESVSVDMKDKKLTVIGDIDPVKVAAKLRKLCHAEIVSVG 68
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: C6SZF1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.406e-14
Identity = 46/76 (60.53%), Postives = 52/76 (68.42%), Query Frame = -2 
Query:  357 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVV--------GKLRKLCHAEMVSVG 560
            M K+VLKVEL+DDKIKKKAMKA           VDMKDQKMT+IGD+D V VV        GKLRK CH E++SVG
Sbjct:    1 MKKVVLKVELHDDKIKKKAMKAVSGISGVESVSVDMKDQKMTIIGDVDPVTVVGKFTKFSLGKLRKFCHVEILSVG 76
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: B9MX50_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_741109 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.399e-14
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = -2 
Query:  180 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVG--XXXXXXXXXXXXXXXXXXXXXXXXXXELTDLWKAYESYHNQMRQXXXXXXYRTVEESPN 560
            MMK VLK++L+DDK KKKAM+            +DMKD+K+T+IGDIDAV +VGKLRK+CH +++SVG                             + +L KAY++Y+  +         R+VEE PN
Sbjct:    1 MMKAVLKLDLHDDKDKKKAMRRVSGLPGVDSISMDMKDKKLTVIGDIDAVCIVGKLRKICHTDIISVGPAKEPEKKKEEPKKVEPKKPEDDKKDKDAVAELVKAYQAYNPYV---TTHYHVRSVEEDPN 126
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: B9TAG3_RICCO (Metal ion binding protein, putative OS=Ricinus communis GN=RCOM_2072230 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.555e-13
Identity = 49/130 (37.69%), Postives = 67/130 (51.54%), Query Frame = -2 
Query:  180 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVG---XXXXXXXXXXXXXXXXXXXXXXXXXXELTDLWKAYESYHNQMRQXXXXXXYRTVEESPN 560
            M K+VLK+EL+DDK KKKAMK            +DMKD+K+T+ GD+D V +V KLRKLCH ++VSVG                             ++ DL KAY++Y+  +         R+ EE PN
Sbjct:    1 MKKVVLKLELHDDKDKKKAMKKVSGLSGVESITLDMKDKKLTVTGDVDPVHIVSKLRKLCHTDIVSVGPAKEPEKKKEEPKKEEPKKPEEKKKDEKNDVADLVKAYQAYNPHL---TTYYYVRSAEEDPN 127
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: B9RCH3_RICCO (Metal ion binding protein, putative OS=Ricinus communis GN=RCOM_1688350 PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.008e-12
Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = -2 
Query:  180 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVGXXXXXXXXXXXXXXXXXXXXXXXXXXELTDLWKAYESYHNQMRQXXXXXXYRTVEESPN 560
            M K+VLK++L+DDK K+KAMKA           +DMK++K+T+IGD+D V VVGKLRK  H ++++VG                          ++ +L +AY++Y+  + Q        + EE+PN
Sbjct:    1 MKKVVLKLDLHDDKAKQKAMKAVSSLSGIDSIAMDMKERKLTVIGDVDPVTVVGKLRKAFHTQILTVGPAKEEKKDEGKKDDGKKDDNKKDPKDQIAELVEAYKAYNPSLTQHYHVV---SAEENPN 124
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: C6T519_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.245e-12
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = -2 
Query:  357 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLC-HAEMVSVG 560
            M KIVLK+E++DDK KKKAM+A           VDM D KMT+IG++DAV VVGKLRK C HA+++SVG
Sbjct:    1 MKKIVLKLEIHDDKTKKKAMRAVSGISGVETVSVDMNDLKMTIIGNVDAVIVVGKLRKCCDHADILSVG 69
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Match: B9GWV4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_757557 PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.002e-12
Identity = 37/68 (54.41%), Postives = 51/68 (75.00%), Query Frame = -2 
Query:  357 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVG 560
            M K+VLK++L+DDK K+KAMKA           +DMK++KMT++GDID V VV KLRK+ HAE+++VG
Sbjct:    1 MKKVVLKLDLHDDKGKQKAMKAVSRLSGIDSISMDMKEKKMTVVGDIDPVDVVSKLRKIWHAEILTVG 68
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TAIR peptide
Match: AT1G01490.2 (| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177)

HSP 1 Score: 57.7658 bits (138), Expect = 5.881e-9
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = -2 
Query:  387 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRK 560
            M KIVLK++L+DD+ K+KA+K            +DMK++K+T+IG +D V VV KLRK
Sbjct:    1 MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRK 58
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TAIR peptide
Match: AT1G01490.1 (| Symbols: | Heavy metal transport/detoxification superfamily protein | chr1:180401-182066 REVERSE LENGTH=177)

HSP 1 Score: 57.7658 bits (138), Expect = 5.881e-9
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = -2 
Query:  387 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRK 560
            M KIVLK++L+DD+ K+KA+K            +DMK++K+T+IG +D V VV KLRK
Sbjct:    1 MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRK 58
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TAIR peptide
Match: AT5G23760.1 (| Symbols: | Copper transport protein family | chr5:8013242-8014129 REVERSE LENGTH=103)

HSP 1 Score: 57.3806 bits (137), Expect = 7.681e-9
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = -2 
Query:  357 KIVLKV-ELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVG 554
            K+VLKV  + DDK K+KA++A            DMKDQK+T+IG +DAV VV KL+K+   +++SVG
Sbjct:    4 KVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKKVGKVDLISVG 70
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TAIR peptide
Match: AT5G52740.1 (| Symbols: | Copper transport protein family | chr5:21382530-21383180 FORWARD LENGTH=118)

HSP 1 Score: 55.0694 bits (131), Expect = 3.812e-8
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = -2 
Query:  357 MMKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSVG 560
            M  +VLK++++ +K K+KAM              ++KD K+T+ G+IDA  +V KL+K+CH E +SVG
Sbjct:    1 MQVVVLKLDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKICHTEFISVG 66
[Close]
BLAST of Cicer_arietinum_v1_Contig528 vs. TAIR peptide
Match: AT5G52750.1 (| Symbols: | Heavy metal transport/detoxification superfamily protein | chr5:21384134-21384795 FORWARD LENGTH=139)

HSP 1 Score: 53.9138 bits (128), Expect = 8.493e-8
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = -2 
Query:  360 MKIVLKVELYDDKIKKKAMKAXXXXXXXXXXXVDMKDQKMTLIGDIDAVKVVGKLRKLCHAEMVSV 557
            MK VL++ +++++I+KKA              +D K  KMT++G++D   +V KLRKLC+ E+VSV
Sbjct:    4 MKAVLQLSIHEERIRKKAFVTVSRCPGVTSITMDDKTGKMTVVGEVDVPVIVMKLRKLCNTELVSV 69
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig528 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q1SWG9_MEDTR1.452e-1945.67Heavy metal transport/detoxification protein OS=Me... [more]
C6T3Z9_SOYBN1.962e-1648.65Putative uncharacterized protein OS=Glycine max PE... [more]
Q1SWG8_MEDTR2.170e-1561.76Heavy metal transport/detoxification protein OS=Me... [more]
C6SYA0_SOYBN4.833e-1563.24Putative uncharacterized protein OS=Glycine max PE... [more]
C6SZF1_SOYBN1.406e-1460.53Putative uncharacterized protein OS=Glycine max PE... [more]
B9MX50_POPTR2.399e-1438.76Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9TAG3_RICCO1.555e-1337.69Metal ion binding protein, putative OS=Ricinus com... [more]
B9RCH3_RICCO1.008e-1234.65Metal ion binding protein, putative OS=Ricinus com... [more]
C6T519_SOYBN2.245e-1259.42Putative uncharacterized protein OS=Glycine max PE... [more]
B9GWV4_POPTR5.002e-1254.41Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of Cicer_arietinum_v1_Contig528 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G01490.25.881e-948.28| Symbols: | Heavy metal transport/detoxification... [more]
AT1G01490.15.881e-948.28| Symbols: | Heavy metal transport/detoxification... [more]
AT5G23760.17.681e-947.76| Symbols: | Copper transport protein family | ch... [more]
AT5G52740.13.812e-839.71| Symbols: | Copper transport protein family | ch... [more]
AT5G52750.18.493e-839.39| Symbols: | Heavy metal transport/detoxification... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 36..54
score
NoneNo IPR availableSEGsegsegcoord: 25..58
score
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 13..136
score: 6.2
NoneNo IPR availablePANTHERPTHR22814:SF5UNCHARACTERIZEDcoord: 13..136
score: 6.2
NoneNo IPR availableSEGsegsegcoord: 27..38
score: NAcoord: 73..99
score: NAcoord: 117..123
score
IPR006121Heavy metal transport/detoxification proteinPFAMPF00403HMAcoord: 10..62
score: 2.2
IPR006121Heavy metal transport/detoxification proteinSUPERFAMILY55008HMA, heavy metal-associated domaincoord: 4..78
score: 2

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig528 ID=Cicer_arietinum_v1_Contig528; Name=Cicer_arietinum_v1_Contig528; organism=Cicer arietinum; type=contig; length=642bp
TTTCTTCTTAGCTAAGAGAAAAAACCCAAAACTAAAAACAAGACAAGAAG
AAAAAAAAATTAATATCATCAAAATGAACCATAACTTTCCAACTTCTTTT
CTTGTTCTCATTTATTTTTACTCTCAAATATTAATTATAATATTTCAATT
TCAATGCCTTATTAACAAATAACACAACCATTAGGTGATTCTTCCACAGT
TCTGTAATAATAATAAGGATATGGTTGTCTCATTTGATTATGATATGATT
CATAAGCTTTCCATAGATCTGTCAATTCCTCTTTTGGATCTTTTTTCTTT
GCCTCTTCCTTTTTTTCTTCTTTCTTTGGTTCTTCTTTTTTCTCTTCTTT
GGCTGGTCCAACTGAAACCATTTCAGCATGACACAATTTCCTTAATTTTC
CAACCACCTTAACAGCATCTATGTCTCCAATTAATGTCATTTTTTGATCC
TTCATGTCCACAGAAACTGACTCAACCCCTGAAAGACCAGATACTGCCTT
CATGGCTTTTTTCTTGATTTTATCATCATAGAGTTCTACCTTTAGCACTA
TTTTCATCATATTGATTTGAAGCTAGTGTGGTGAGGATGCTAAGTAGGAA
GCTCAAGAGAGTATTGAAGAAGAAGGATGTTGTGATTGAATT
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom