Cicer_arietinum_v1_Contig541

Contig Overview


Name	Cicer_arietinum_v1_Contig541
Unique Name	Cicer_arietinum_v1_Contig541
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	1087

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR404249	EST	GR404249:97..439 +	Cicer arietinum unigene v1	n/a
HO664164	EST	HO664164:1..553 +	Cicer arietinum unigene v1	n/a
GR401498	EST	GR401498:97..746 +	Cicer arietinum unigene v1	n/a
GR404281	EST	GR404281:97..723 +	Cicer arietinum unigene v1	n/a
GR403700	EST	GR403700:97..862 +	Cicer arietinum unigene v1	n/a
GR404972	EST	GR404972:528..825 -	Cicer arietinum unigene v1	n/a
GR401886	EST	GR401886:540..825 -	Cicer arietinum unigene v1	n/a
GR401879	EST	GR401879:557..825 -	Cicer arietinum unigene v1	n/a
ES560235	EST	ES560235:603..869 +	Cicer arietinum unigene v1	n/a
GR403222	EST	GR403222:540..880 +	Cicer arietinum unigene v1	n/a
GR403798	EST	GR403798:411..963 +	Cicer arietinum unigene v1	n/a
GR421063	EST	GR421063:837..1088 -	Cicer arietinum unigene v1	n/a
GR402222	EST	GR402222:540..1088 +	Cicer arietinum unigene v1	n/a
GR401887	EST	GR401887:540..1088 +	Cicer arietinum unigene v1	n/a
GR402608	EST	GR402608:540..1079 +	Cicer arietinum unigene v1	n/a
GR404432	EST	GR404432:956..1088 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR404249	GR404249	Cicer arietinum	EST
HO664164	HO664164	Cicer arietinum	EST
GR401498	GR401498	Cicer arietinum	EST
GR404281	GR404281	Cicer arietinum	EST
GR403700	GR403700	Cicer arietinum	EST
GR404972	GR404972	Cicer arietinum	EST
GR401886	GR401886	Cicer arietinum	EST
GR401879	GR401879	Cicer arietinum	EST
ES560235	ES560235	Cicer arietinum	EST
GR403222	GR403222	Cicer arietinum	EST
GR403798	GR403798	Cicer arietinum	EST
GR421063	GR421063	Cicer arietinum	EST
GR402222	GR402222	Cicer arietinum	EST
GR401887	GR401887	Cicer arietinum	EST
GR402608	GR402608	Cicer arietinum	EST
GR404432	GR404432	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. SwissProt
Match: MEI2_SCHPO (Meiosis protein mei2 OS=Schizosaccharomyces pombe GN=mei2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.828e-27
Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSN 375
            P ++T +ML   ID  ++GTYDFLYL IDF NKCNVGYAFIN + P  I+ F KA  G +W  F+SEK+  ++YA IQGK  L+  F+NS +M+E+   RP +F S G +   +E F + N
Sbjct:  605 PNKFTQQMLRDYIDVTNKGTYDFLYLRIDFVNKCNVGYAFINFIEPQSIITFGKARVGTQWNVFHSEKICDISYANIQGKDRLIEKFRNSCVMDENPAYRPKIFVSHGPNRGMEEPFPAPN 725

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. SwissProt
Match: PLA2_ORYSJ (Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica GN=PLA2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.372e-22
Identity = 53/121 (43.80%), Postives = 69/121 (57.02%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDE-----NHQ------------GTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 324
            P +Y+ K+LL  +D      N Q             +YDFLYLPIDF NKCNVGY F+N+ SP   V  YKAF+ + WE FNS K+  + YAR+QG  AL  HF+NS    +     P++F
Sbjct:  466 PNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKNSKFPCDSDEYLPVVF 586

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. SwissProt
Match: PLA2_ORYSI (Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 7.372e-22
Identity = 53/121 (43.80%), Postives = 69/121 (57.02%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDE-----NHQ------------GTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 324
            P +Y+ K+LL  +D      N Q             +YDFLYLPIDF NKCNVGY F+N+ SP   V  YKAF+ + WE FNS K+  + YAR+QG  AL  HF+NS    +     P++F
Sbjct:  463 PNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKNSKFPCDSDEYLPVVF 583

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. SwissProt
Match: TE1_MAIZE (Protein terminal ear1 OS=Zea mays GN=TE1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.659e-21
Identity = 52/130 (40.00%), Postives = 72/130 (55.38%), Query Frame = 1

Query:   13 PGRYTSKMLLAAID---------------ENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFH--SEGQDTSD 351
            P +Y+ K+LL  +D               E     YDF+YLPIDF NKCNVGY F+N+ SP   V  YKAF+ + WE +NS K+  + YAR+QG  AL  HF+NS    +     P+ F    +G++ +D
Sbjct:  449 PNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDFNNKCNVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGLEALKEHFKNSKFPCDSDEYLPVAFSPARDGKELTD 578

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: Q6J739_MEDTR (AML1 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 2.972e-80
Identity = 143/152 (94.08%), Postives = 150/152 (98.68%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQPDGTYSGDLLESPKGNSDENLEKD 468
            P +YTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIV F+KAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQPDG+YSGD+LESPKGNSD+NLE++
Sbjct:  705 PNKYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQPDGSYSGDMLESPKGNSDDNLERE 856

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: D7TMM9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_142.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000781001 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.024e-72
Identity = 131/147 (89.12%), Postives = 139/147 (94.56%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQPDGTYSGDLLESPKGNSDE 453
            P +YTSKMLLAAIDENH+GTYDFLYLPIDFKNKCNVGYAFINMVSPSHI+PFY+AFNGKKWEKFNSEKVASLAYARIQGKAALV HFQNSSLMNEDKRCRPILFHSEGQ+T DQE F S NLNICIRQPDG+YSGD LESPKGN ++
Sbjct:   99 PNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKAALVTHFQNSSLMNEDKRCRPILFHSEGQETVDQEPFASGNLNICIRQPDGSYSGDSLESPKGNLED 245

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: B9H813_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_714870 PE=4 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 6.211e-70
Identity = 127/152 (83.55%), Postives = 140/152 (92.11%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQPDGTYSGDLLESPKGNSDENLEKD 468
            P +YTSKMLLAAIDENH+GTYDFLYLPIDFKNKCNVGYAFINMVSP+ I+ FY+AFNGK+WEKFNSEKVASLAYARIQGKAALV HFQNSSLMNEDKRCRPILFHSEGQ+ +DQE FLS NLNICIRQPDG+YSGD L+ P+ + DE LEK+
Sbjct:  590 PNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPACIISFYEAFNGKRWEKFNSEKVASLAYARIQGKAALVTHFQNSSLMNEDKRCRPILFHSEGQEATDQEPFLSGNLNICIRQPDGSYSGDSLDCPEDSLDEKLEKN 741

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: B9S181_RICCO (RNA-binding protein, putative OS=Ricinus communis GN=RCOM_0634660 PE=4 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 2.286e-64
Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQ---EHFLSSNLNICIRQPDGTYSGDLLESP 435
            P +YTS MLLAAIDENH+GTYDFLYLPIDFKNKCNVGYAFINM+SPSHI+PFY+AFNGKKWEKFNSEKVASLAYARIQGKAALV HFQNSSLMNEDKRCRPILFHSEGQ+  DQ   EHF SS+LNI  RQPDG +SGD   SP
Sbjct:  568 PNKYTSNMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPSHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKAALVTHFQNSSLMNEDKRCRPILFHSEGQEEGDQIFREHFPSSSLNIQFRQPDGLFSGDFPGSP 711

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: D7TJZ0_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021379001 PE=4 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 3.090e-61
Identity = 116/145 (80.00%), Postives = 128/145 (88.28%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSD---QEHFLSSNLNICIRQPDGTYSGDLLESPK 438
            P +YTSKMLLAAIDE H+GTYDFLYLPIDFKNKCNVGYAFINM+SPSHI+PFY+AFNGKKWEKFNSEKVASLAYARIQGKAALV HFQNSSLMNEDKRCRPILFHSEG +  D   QEH  S++LNI + QP+G+  GD  ESP+
Sbjct:  632 PNKYTSKMLLAAIDEYHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSHIIPFYQAFNGKKWEKFNSEKVASLAYARIQGKAALVTHFQNSSLMNEDKRCRPILFHSEGPEAGDQIIQEHLPSNSLNIQVPQPNGSQIGDTPESPE 776

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: Q6J733_CITUN (AML1 OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.617e-57
Identity = 112/155 (72.26%), Postives = 126/155 (81.29%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSD---QEHFLSSNLNICIRQPDGTYSGDLLESP----KGNSDEN 456
            P +YTSKMLLAAIDENH+GTYDFLYLPIDFKNKCNVGYAFINM+SP HI+PFY+AFNGKKWEKFNSEKVASLAYARIQG+AALV HFQNSSLMNEDKRCRPILFHSEG +  D   QE   S ++N  +   +G++  D   SP    +GN  EN
Sbjct:  703 PNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRPILFHSEGPEAGDQVTQEQLNSDSVNFQVCPSNGSHLRDASGSPIADDEGNKPEN 857

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: B9T754_RICCO (RNA-binding protein, putative OS=Ricinus communis GN=RCOM_0235780 PE=4 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.940e-55
Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQE 357
            P +YTSKMLLAAIDENH+G YDFLYLPIDFKNKCNVGYAFINM SPSHI+PFY+AFNGKKWEKFNSEKVASLAYARIQGKAALV HFQNSSLMNEDKRCRPILFHSEGQ+  +Q+
Sbjct:  660 PNKYTSKMLLAAIDENHRGAYDFLYLPIDFKNKCNVGYAFINMASPSHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKAALVSHFQNSSLMNEDKRCRPILFHSEGQEAGEQD 774

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: Q6ZI17_ORYSJ (MEI2-like RNA binding protein OS=Oryza sativa subsp. japonica GN=OJ1008_D06.12-1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.145e-54
Identity = 110/155 (70.97%), Postives = 123/155 (79.35%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQP--DGTY-SGDLLESPKGNSDENLEKD 468
            P +YTSKMLLAAIDE H+GTYDF YLPIDFKNKCNVGYAFINM+SP HIV FY+AFNGKKWEKFNSEKVASLAYARIQG+ AL+ HFQNSSLMNEDKRCRPILFHS G D  +QE F  +   ICI  P  DG   +GD    P GN ++N + +
Sbjct:  693 PNKYTSKMLLAAIDEFHKGTYDFFYLPIDFKNKCNVGYAFINMISPVHIVSFYQAFNGKKWEKFNSEKVASLAYARIQGRTALISHFQNSSLMNEDKRCRPILFHSNGPDAGNQEPFPIN--GICIHMPLEDGAIATGD----PFGNEEDNNQNE 841

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: B9F2E2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_08169 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.145e-54
Identity = 110/155 (70.97%), Postives = 123/155 (79.35%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQP--DGTY-SGDLLESPKGNSDENLEKD 468
            P +YTSKMLLAAIDE H+GTYDF YLPIDFKNKCNVGYAFINM+SP HIV FY+AFNGKKWEKFNSEKVASLAYARIQG+ AL+ HFQNSSLMNEDKRCRPILFHS G D  +QE F  +   ICI  P  DG   +GD    P GN ++N + +
Sbjct:  800 PNKYTSKMLLAAIDEFHKGTYDFFYLPIDFKNKCNVGYAFINMISPVHIVSFYQAFNGKKWEKFNSEKVASLAYARIQGRTALISHFQNSSLMNEDKRCRPILFHSNGPDAGNQEPFPIN--GICIHMPLEDGAIATGD----PFGNEEDNNQNE 948

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Match: B8AHN0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08719 PE=4 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.145e-54
Identity = 110/155 (70.97%), Postives = 123/155 (79.35%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFLSSNLNICIRQP--DGTY-SGDLLESPKGNSDENLEKD 468
            P +YTSKMLLAAIDE H+GTYDF YLPIDFKNKCNVGYAFINM+SP HIV FY+AFNGKKWEKFNSEKVASLAYARIQG+ AL+ HFQNSSLMNEDKRCRPILFHS G D  +QE F  +   ICI  P  DG   +GD    P GN ++N + +
Sbjct:  800 PNKYTSKMLLAAIDEFHKGTYDFFYLPIDFKNKCNVGYAFINMISPVHIVSFYQAFNGKKWEKFNSEKVASLAYARIQGRTALISHFQNSSLMNEDKRCRPILFHSNGPDAGNQEPFPIN--GICIHMPLEDGAIATGD----PFGNEEDNNQNE 948

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT5G07290.1 (| Symbols: AML4, ML4 | MEI2-like 4 | chr5:2294248-2298491 FORWARD LENGTH=907)

HSP 1 Score: 209.149 bits (531), Expect = 3.443e-54
Identity = 105/155 (67.74%), Postives = 121/155 (78.06%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHF-LSSNLNICIRQPDGTYSGDLLESPKGNSDENLEKD*P 474
            P +YTSKMLLAAIDE  +GTYDFLYLPIDFKNKCNVGYAFIN++ P +IVPFYKAFNGKKWEKFNSEKVASLAY RIQGK+AL+ HFQNSSLMNEDKRCRPILFH+ G +  DQE F + SN    IR   G +  + +E+    S  +  +D P
Sbjct:  750 PNKYTSKMLLAAIDEYCKGTYDFLYLPIDFKNKCNVGYAFINLIEPENIVPFYKAFNGKKWEKFNSEKVASLAYGRIQGKSALIAHFQNSSLMNEDKRCRPILFHTAGPNAGDQEPFPMGSN----IRSRPGKHRTNSIENYTNFSSSSDNRDEP 900

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT5G61960.2 (| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24879001-24883483 REVERSE LENGTH=915)

HSP 1 Score: 206.453 bits (524), Expect = 2.232e-53
Identity = 102/162 (62.96%), Postives = 123/162 (75.93%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHF-LSSNLNICIRQPDGT----YSGDLLESPKGNSDENLEKD*PFVR 483
            P +YTSKMLL+AIDE+ +GTYDFLYLPIDFKNKCNVGYAFIN++ P  IVPF+KAFNGKKWEKFNSEKVA+L YARIQGK AL+ HFQNSSLMNEDKRCRPILFH++G +  DQE F + SN+     +P  +    Y+   + S   N +E      PF++
Sbjct:  752 PNKYTSKMLLSAIDEHCKGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKFNSEKVATLTYARIQGKTALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQEPFPMGSNIRSRPGKPRSSSIDNYNSFSISSVSENREETPNGTDPFLK 913

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT5G61960.1 (| Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24879001-24883483 REVERSE LENGTH=915)

HSP 1 Score: 206.453 bits (524), Expect = 2.232e-53
Identity = 102/162 (62.96%), Postives = 123/162 (75.93%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHF-LSSNLNICIRQPDGT----YSGDLLESPKGNSDENLEKD*PFVR 483
            P +YTSKMLL+AIDE+ +GTYDFLYLPIDFKNKCNVGYAFIN++ P  IVPF+KAFNGKKWEKFNSEKVA+L YARIQGK AL+ HFQNSSLMNEDKRCRPILFH++G +  DQE F + SN+     +P  +    Y+   + S   N +E      PF++
Sbjct:  752 PNKYTSKMLLSAIDEHCKGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKFNSEKVATLTYARIQGKTALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQEPFPMGSNIRSRPGKPRSSSIDNYNSFSISSVSENREETPNGTDPFLK 913

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT1G29400.2 (| Symbols: AML5, ML5 | MEI2-like protein 5 | chr1:10290393-10293696 REVERSE LENGTH=800)

HSP 1 Score: 191.815 bits (486), Expect = 5.688e-49
Identity = 89/115 (77.39%), Postives = 102/115 (88.70%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQE 357
            P +YTSKMLLAAIDE +QGTY+FLYLPIDFKNKCNVGYAFINM++P  I+PFY+AFNGKKWEKFNSEKVASLAYARIQGK+AL+ HFQNSSLMNED RCRPI+F +     S ++
Sbjct:  661 PNKYTSKMLLAAIDEKNQGTYNFLYLPIDFKNKCNVGYAFINMLNPELIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSSLMNEDMRCRPIIFDTPNNPESVEQ 775

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT1G29400.1 (| Symbols: AML5, ML5 | MEI2-like protein 5 | chr1:10290393-10293696 REVERSE LENGTH=800)

HSP 1 Score: 191.815 bits (486), Expect = 5.688e-49
Identity = 89/115 (77.39%), Postives = 102/115 (88.70%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQE 357
            P +YTSKMLLAAIDE +QGTY+FLYLPIDFKNKCNVGYAFINM++P  I+PFY+AFNGKKWEKFNSEKVASLAYARIQGK+AL+ HFQNSSLMNED RCRPI+F +     S ++
Sbjct:  661 PNKYTSKMLLAAIDEKNQGTYNFLYLPIDFKNKCNVGYAFINMLNPELIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSSLMNEDMRCRPIIFDTPNNPESVEQ 775

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT4G18120.2 (| Symbols: AML3, ML3 | MEI2-like 3 | chr4:10038878-10041950 FORWARD LENGTH=730)

HSP 1 Score: 182.185 bits (461), Expect = 4.507e-46
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 324
            P +YT  MLLAAIDE + GTYDFLYLPIDFKNKCNVGYAFINMVSP   +  Y+AFNGKKW+KFNSEKVASLAYARIQGKAAL+ HFQNSSLMNED+RC+PI+F
Sbjct:  592 PNKYTRNMLLAAIDEKNSGTYDFLYLPIDFKNKCNVGYAFINMVSPKFTIALYEAFNGKKWDKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDRRCQPIVF 695

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT4G18120.1 (| Symbols: AML3, ML3 | MEI2-like 3 | chr4:10038878-10041950 FORWARD LENGTH=730)

HSP 1 Score: 182.185 bits (461), Expect = 4.507e-46
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILF 324
            P +YT  MLLAAIDE + GTYDFLYLPIDFKNKCNVGYAFINMVSP   +  Y+AFNGKKW+KFNSEKVASLAYARIQGKAAL+ HFQNSSLMNED+RC+PI+F
Sbjct:  592 PNKYTRNMLLAAIDEKNSGTYDFLYLPIDFKNKCNVGYAFINMVSPKFTIALYEAFNGKKWDKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDRRCQPIVF 695

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT2G42890.3 (| Symbols: AML2, ML2 | MEI2-like 2 | chr2:17850632-17854205 FORWARD LENGTH=830)

HSP 1 Score: 175.252 bits (443), Expect = 5.509e-44
Identity = 86/147 (58.50%), Postives = 105/147 (71.43%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRP-ILFHSEGQDTSDQEHFLSSNLNICIRQPDGTYSGDLLESPKGNSD 450
            P +YT KML+A IDE H+G YDFL LP DFKNKCN+G+AFINMVSP HIVPF + FNGK WEKFNS KVASLAYA IQGK+AL  + Q  S M E K+  P + +H +GQD +D E   SS  NI     D +Y+ DL+E+P+ N +
Sbjct:  675 PNKYTYKMLVAEIDEKHKGDYDFLCLPTDFKNKCNMGHAFINMVSPLHIVPFQQTFNGKIWEKFNSGKVASLAYAEIQGKSALASYMQTPSSMKEQKQLFPEVSYHDDGQDANDHEQLFSSIWNITAPDSDWSYTMDLIENPRENGN 821

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT2G42890.2 (| Symbols: AML2, ML2 | MEI2-like 2 | chr2:17850632-17854205 FORWARD LENGTH=830)

HSP 1 Score: 175.252 bits (443), Expect = 5.509e-44
Identity = 86/147 (58.50%), Postives = 105/147 (71.43%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRP-ILFHSEGQDTSDQEHFLSSNLNICIRQPDGTYSGDLLESPKGNSD 450
            P +YT KML+A IDE H+G YDFL LP DFKNKCN+G+AFINMVSP HIVPF + FNGK WEKFNS KVASLAYA IQGK+AL  + Q  S M E K+  P + +H +GQD +D E   SS  NI     D +Y+ DL+E+P+ N +
Sbjct:  675 PNKYTYKMLVAEIDEKHKGDYDFLCLPTDFKNKCNMGHAFINMVSPLHIVPFQQTFNGKIWEKFNSGKVASLAYAEIQGKSALASYMQTPSSMKEQKQLFPEVSYHDDGQDANDHEQLFSSIWNITAPDSDWSYTMDLIENPRENGN 821

[Close]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Match: AT2G42890.1 (| Symbols: AML2, ML2 | MEI2-like 2 | chr2:17850077-17854205 FORWARD LENGTH=843)

HSP 1 Score: 175.252 bits (443), Expect = 5.509e-44
Identity = 86/147 (58.50%), Postives = 105/147 (71.43%), Query Frame = 1

Query:   13 PGRYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVPFYKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRP-ILFHSEGQDTSDQEHFLSSNLNICIRQPDGTYSGDLLESPKGNSD 450
            P +YT KML+A IDE H+G YDFL LP DFKNKCN+G+AFINMVSP HIVPF + FNGK WEKFNS KVASLAYA IQGK+AL  + Q  S M E K+  P + +H +GQD +D E   SS  NI     D +Y+ DL+E+P+ N +
Sbjct:  688 PNKYTYKMLVAEIDEKHKGDYDFLCLPTDFKNKCNMGHAFINMVSPLHIVPFQQTFNGKIWEKFNSGKVASLAYAEIQGKSALASYMQTPSSMKEQKQLFPEVSYHDDGQDANDHEQLFSSIWNITAPDSDWSYTMDLIENPRENGN 834

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig541 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig541 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
MEI2_SCHPO	5.828e-27	48.76	Meiosis protein mei2 OS=Schizosaccharomyces pombe ...	[more]
PLA2_ORYSJ	7.372e-22	43.80	Protein terminal ear1 homolog OS=Oryza sativa subs...	[more]
PLA2_ORYSI	7.372e-22	43.80	Protein terminal ear1 homolog OS=Oryza sativa subs...	[more]
TE1_MAIZE	3.659e-21	40.00	Protein terminal ear1 OS=Zea mays GN=TE1 PE=2 SV=1	[more]

BLAST of Cicer_arietinum_v1_Contig541 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q6J739_MEDTR	2.972e-80	94.08	AML1 OS=Medicago truncatula PE=2 SV=1	[more]
D7TMM9_VITVI	1.024e-72	89.12	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9H813_POPTR	6.211e-70	83.55	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9S181_RICCO	2.286e-64	84.03	RNA-binding protein, putative OS=Ricinus communis ...	[more]
D7TJZ0_VITVI	3.090e-61	80.00	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q6J733_CITUN	4.617e-57	72.26	AML1 OS=Citrus unshiu PE=2 SV=1	[more]
B9T754_RICCO	1.940e-55	88.70	RNA-binding protein, putative OS=Ricinus communis ...	[more]
Q6ZI17_ORYSJ	2.145e-54	70.97	MEI2-like RNA binding protein OS=Oryza sativa subs...	[more]
B9F2E2_ORYSJ	2.145e-54	70.97	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B8AHN0_ORYSI	2.145e-54	70.97	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of Cicer_arietinum_v1_Contig541 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT5G07290.1	3.443e-54	67.74	\| Symbols: AML4, ML4 \| MEI2-like 4 \| chr5:2294248-...	[more]
AT5G61960.2	2.232e-53	62.96	\| Symbols: AML1, ML1 \| MEI2-like protein 1 \| chr5:...	[more]
AT5G61960.1	2.232e-53	62.96	\| Symbols: AML1, ML1 \| MEI2-like protein 1 \| chr5:...	[more]
AT1G29400.2	5.688e-49	77.39	\| Symbols: AML5, ML5 \| MEI2-like protein 5 \| chr1:...	[more]
AT1G29400.1	5.688e-49	77.39	\| Symbols: AML5, ML5 \| MEI2-like protein 5 \| chr1:...	[more]
AT4G18120.2	4.507e-46	80.77	\| Symbols: AML3, ML3 \| MEI2-like 3 \| chr4:10038878...	[more]
AT4G18120.1	4.507e-46	80.77	\| Symbols: AML3, ML3 \| MEI2-like 3 \| chr4:10038878...	[more]
AT2G42890.3	5.509e-44	58.50	\| Symbols: AML2, ML2 \| MEI2-like 2 \| chr2:17850632...	[more]
AT2G42890.2	5.509e-44	58.50	\| Symbols: AML2, ML2 \| MEI2-like 2 \| chr2:17850632...	[more]
AT2G42890.1	5.509e-44	58.50	\| Symbols: AML2, ML2 \| MEI2-like 2 \| chr2:17850077...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007201	RNA recognition motif 2	PFAM	PF04059	RRM_2	coord: 5..92 score: 2
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..85 score: 1.1

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig541 ID=Cicer_arietinum_v1_Contig541; Name=Cicer_arietinum_v1_Contig541; organism=Cicer arietinum; type=contig; length=1087bp
TCGAGCGGCCGCCCGGGCAGGTACACTTCGAAGATGCTACTTGCTGCAAT
TGATGAGAATCACCAAGGGACTTATGATTTTCTCTATCTGCCTATTGACT
TCAAAAATAAATGTAACGTGGGTTATGCTTTCATCAATATGGTCTCTCCT
TCACACATCGTCCCTTTCTATAAGGCTTTTAATGGGAAGAAATGGGAGAA
ATTTAATAGTGAAAAAGTTGCTTCACTGGCGTATGCGCGGATTCAGGGAA
AGGCTGCACTTGTGATGCATTTTCAGAATTCAAGCTTAATGAATGAGGAC
AAGCGGTGTCGACCAATCCTCTTTCACTCAGAGGGCCAAGATACTAGTGA
CCAGGAACATTTTCTATCGAGCAACTTGAACATATGCATTCGTCAACCGG
ATGGAACTTACTCAGGTGATTTGTTGGAGAGCCCAAAGGGCAATTCGGAT
GAGAATCTAGAGAAAGATTAACCATTTGTTAGATAAATTATTGCTCCTAG
CCACATTACATATGGTCTAGGAGTGCTAACTAATGCATAGTTAATCTTAA
TGTGTACAAAGTTGATTCATAAAAAAACCAGGAAAACAAAAAAATCGGTG
TATAAAGATTAAGGGATGAATCCATTTATCAGCTGGAGGAGACTCTTAAT
GTGTCAATAGTTAATAATAATCTTTTAAAAAAAAGAATGAAGAAACCGGT
TTGTCGATGTGTAGAGGAACAATTGTGTTATATTATCAGAGGAAAATAAT
AACTTGGGATTTGGAGGTTTCTACAGCAGCATGCATGCCAGATTGTGCAG
GATGAGTCTTTCTGGAATTTGTTATTTTTTTTTCTGGTCCTTTGTTGAGG
ATATTAATATGTATATGTACAAAAGAAAATTCTAATTTATGGAAAAACTG
TTTGTATAGAAGGGAAACAAGGTACTATCCTGTTTGTAATTGTTGTTTTA
TGGAGTCAAAAATTGTGAATGTGTGTAAAGATGTGAGCTGGGTTCTTGCT
ATTTCATCAGAATGTTGGTGAAAAATTCTATATACATTGAAACATTGGAG
GTTCTTTTAAGTATTGTTTTAGTTTTTTTAAAAAAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR007201	Mei2-like_Rrm_C

Search form

Cicer_arietinum_v1_Contig541