Cicer_arietinum_v1_Contig546
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: D7UBX2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_74.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00034740001 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.861e-46 Identity = 84/131 (64.12%), Postives = 104/131 (79.39%), Query Frame = 1 Query: 22 YCIVCGRSSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGKPADQS 414 +CIVCGRS+SKEF DTQRLVTHA+MSHK GLRA HLGLHKA+CVL+GW++ VP DT+TW+P VLP EAL QKED HNIS+S+ +P+ WK+V++E + AF+RGKGF G+ K+CLGKPAD S Sbjct: 33 FCIVCGRSNSKEFMDTQRLVTHAYMSHKFGLRADHLGLHKAICVLLGWNSIVPPDTITWVPHVLPGDEALTQKEDLILWPPLVIIHNISISNSDPEEWKLVTIEALGAFLRGKGFGGGKFKMCLGKPADHS 163
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: B9T197_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0760530 PE=4 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.751e-45 Identity = 87/131 (66.41%), Postives = 102/131 (77.86%), Query Frame = 1 Query: 22 YCIVCGRSSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGKPADQS 414 +CIVC RS+SK+F DTQRLVTHAFMSHK GLRA+HLGLHKA+CVLMGW+T VP DT TW+P VL EA QKED HNISMS++NP+ VV +E +E F+RGKGFV G+IK+CLGKPADQS Sbjct: 732 FCIVCRRSASKDFLDTQRLVTHAFMSHKVGLRARHLGLHKAICVLMGWNTYVPCDTTTWVPDVLSDEEAWAQKEDLMLWPPLVIIHNISMSNNNPEQQTVVPIEGVEGFLRGKGFVGGKIKVCLGKPADQS 862
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: B9HVZ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_660193 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 6.461e-32 Identity = 67/111 (60.36%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 43 SSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRG 375 SSSKEF Q LV HAFMSHK GLRA+HLGLHKA+CVLMGW++SVP D +T P++LP EA QKED HNISMS++NP+ KV+ +E +EAF+RGKG V G Sbjct: 31 SSSKEFMAAQNLVQHAFMSHKIGLRAQHLGLHKAICVLMGWNSSVPCDAITCAPEILPDEEAFAQKEDLMLWPPLVVIHNISMSNNNPEQQKVIPIEGVEAFLRGKGIVGG 141
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: B9HL24_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_655809 PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.334e-28 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 70 QRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGK 360 Q LV HAFMSHK GLRA+HLGLHKA+CVLMGW++SVP D +T +P++LP EA+ QKED HNISMS++NP++ KVV +E +EAF+RGK Sbjct: 4 QNLVQHAFMSHKIGLRAQHLGLHKAICVLMGWNSSVPCDAITCVPEILPAEEAVAQKEDLMLWPPLVVIHNISMSNNNPEHQKVVPIEGVEAFLRGK 100
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: D7SN41_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031382001 PE=4 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.443e-23 Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 25 CIVCGRSSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGKPADQS 414 C +CG S+SKEF +T LV H MS K GLR +HLGL KA+C+LMGW++ V + W+ QVLP AE+L KED HN S+ + +P +V+++ + +R GF G+ ++C GKPA+QS Sbjct: 747 CSICG-SNSKEFMNTIGLVMHTIMSPKGGLRVQHLGLFKALCLLMGWNSDVTPNK-PWVHQVLPAAESLALKEDLIIWPPVVIVHNSSIGNSDPDERMIVTIDMLVTILRDMGFDGGKTQICRGKPANQS 874
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: Q6JJ25_IPOTF (Putative uncharacterized protein OS=Ipomoea trifida PE=4 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.916e-22 Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 25 CIVCGRSSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGKPADQS 414 CI+CGR S +EF D + LV HA S KAG+R++H G HKA+C+LMGW ++ ++ W+ +VLP E L KED HNI++++ NP VVS+E +E +R GF K+C GKP + S Sbjct: 865 CIICGRDS-EEFGDVESLVMHALTSSKAGVRSQHFGFHKALCLLMGWKSAEAPNS-AWVHKVLPEDETLALKEDLIIWPPVVVIHNITITNTNPDERVVVSVEELETKLRDMGFGG---KVCRGKPGNLS 989
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: A0PAD3_IPOTF (Putative uncharacterized protein OS=Ipomoea trifida PE=4 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.916e-22 Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 25 CIVCGRSSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGKPADQS 414 CI+CGR S +EF D + LV HA S KAG+R++H G HKA+C+LMGW ++ ++ W+ +VLP E L KED HNI++++ NP VVS+E +E +R GF K+C GKP + S Sbjct: 887 CIICGRDS-EEFGDVESLVMHALTSSKAGVRSQHFGFHKALCLLMGWKSAEAPNS-AWVHKVLPEDETLALKEDLIIWPPVVVIHNITITNTNPDERVVVSVEELETKLRDMGFGG---KVCRGKPGNLS 1011
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: B9SSW2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0792940 PE=4 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.673e-20 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 52 KEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGKPADQST 417 KEF DT L HAF S K G R+ HLG KA+CVLMGWD+ + ++ WI Q+LP AEA QKED N S++++N +VS+E ++ +RG G RG LC GK A++ST Sbjct: 23 KEFVDTISLAQHAFTSCKVGSRSGHLGFGKALCVLMGWDSKIVPNS-RWIWQILPAAEASSQKEDLILWPPVVLIQNSSIANENLDERMLVSIEGLKDILRGMGCDRGMTNLCHGKAANRST 143
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: B9HQU8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_649106 PE=4 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.397e-18 Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 94 MSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGKPADQST 417 MS K RA+HLGLHKA+CVLMGW+ S W+ Q+LP EA KED HN S+++DNP +VS+E + +RG GF +G +C GK A+QST Sbjct: 1 MSSKGSFRAEHLGLHKALCVLMGWN-SAGFPNSQWVRQILPEVEASSLKEDLIIWPPVVVIHNRSIANDNPDERIIVSVEGLRHILRGMGFGQGITNICRGKAANQST 107
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Match: B9RTR8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0912140 PE=4 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.207e-15 Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 4 SGRPGRY-CIVCGRSSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGK 399 +G+ GR C+VCGRSS K+F DT LV H + S A LR HLGLHKA+C+LMGW+ S P D + Q+LP A ++D HN + + + ++ IR GF G+ K G+ Sbjct: 273 NGKQGRLMCLVCGRSS-KDFPDTHALVMHTYNSDNADLRVDHLGLHKALCILMGWNYSKPPDNAK-VYQLLPADVAATNQDDLVMWPPMVIIHNTVTGKGKDGRIEGLGNKAMDNKIRDLGFSGGKSKSLYGR 403
BLAST of Cicer_arietinum_v1_Contig546 vs. TAIR peptide
Match: AT3G22430.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). | chr3:7953455-7957605 FORWARD LENGTH=510) HSP 1 Score: 73.1738 bits (178), Expect = 6.245e-14 Identity = 48/133 (36.09%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 4 SGRPGRY-CIVCGRSSSKEFTDTQRLVTHAFMSHKAGLRAKHLGLHKAMCVLMGWDTSVPHDTVTWIPQVLPHAEALVQKEDXXXXXXXXXXHNISMSDDNPQNWKVVSMETIEAFIRGKGFVRGRIKLCLGK 399 +GR GR C+VCGRSS K+ DT LV H + S + R HLGLHKA+CVLMGW+ S D + Q LP EA + + N S + +T++ IR G G+ K G+ Sbjct: 277 NGRKGRLQCLVCGRSS-KDVQDTHSLVMHTYCSDDSSSRVHHLGLHKALCVLMGWNFSKAPDN-SKAYQNLPADEAAINQAQLIIWPPHVIVQNTSTGKGKEGRMEGFGNKTMDNRIRELGLTGGKSKSLYGR 407 The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig546 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of Cicer_arietinum_v1_Contig546 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Cicer_arietinum_v1_Contig546 ID=Cicer_arietinum_v1_Contig546; Name=Cicer_arietinum_v1_Contig546; organism=Cicer arietinum; type=contig; length=431bpback to top |