Cicer_arietinum_v1_Contig562

Contig Overview


Name	Cicer_arietinum_v1_Contig562
Unique Name	Cicer_arietinum_v1_Contig562
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	1032

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
HO214282	EST	HO214282:1..255 +
CK148995	EST	CK148995:35..432 +
CK148920	EST	CK148920:15..676 +
CK148724	EST	CK148724:355..1032 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
HO214282	HO214282	Cicer arietinum	EST
CK148995	CK148995	Cicer arietinum	EST
CK148920	CK148920	Cicer arietinum	EST
CK148724	CK148724	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
Match: CIGR1_ORYSJ (Chitin-inducible gibberellin-responsive protein 1 OS=Oryza sativa subsp. japonica GN=CIGR1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.667e-26
Identity = 96/275 (34.91%), Postives = 142/275 (51.64%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRI--LGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSG--ISPSYNSSLETNHYMHRSVSSVNSLKERLQ-----LYSARNSLLQSNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTS-GQRHRLWNHEHQE-------SQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            MD  QL  + +  A   Y    PT  +L N       LK    +SP +P SS F+ D  SA +++ +  +S E +S   ISP    S       +R    +  L+E +Q     LY+       + Q  L E+ET LMAPD ++ TTS     E ++      QR R W+HE ++       SQ+      Y T+S +       +++R+L E+      P   +KQLL  CA+A+SE+ T++F +L++ A+ VVSINGEPIQRLGAY++EGLVA
Sbjct:    1 MDLHQLLKYRLTGANVVY--EIPTENNLQNSPWQANPLKYEFSDSPYTPLSSQFECDNLSALTNTPDNQSSTETISAQPISPLEADS------SYRQAGIL--LQENIQVGADPLYATSR---HNMQHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHESRQPLPGVGRSQFASG--GYPTASYEFRPE---KRQRELRED------PQIIVKQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVA 251

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.856e-11
Identity = 50/146 (34.25%), Postives = 76/146 (52.05%), Query Frame = 2

Query:  602 SNQKVLLELETALMAPDDNEVTTSNSSLGES-VRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQ--GFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            S+Q       + L   D +  +T  S +G S V E  +  + +L   +  E+  +      V S   S     V  +  LE E   +  G P  +LK+LLIACA+A+ E N+   D +I   + +VS++GEP++RLGAY+VEGLVA
Sbjct:   87 SSQSFTTRSGSPLSQEDSHSDSTDGSPVGASCVTEDPNDLKQKL---KDLEAVMLGPDSEIVNSLENS-----VANQLSLEPEKWVRMMGIPRGNLKELLIACARAVEEKNSFAIDMMIPELRKIVSVSGEPLERLGAYMVEGLVA 224

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.869e-9
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 2

Query:  848 SSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            S+ +     DL+  L++CAKAMSEN+      ++E  + +VS++GEPIQRLGAY++EGLVA
Sbjct:  109 STLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVA 169

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.470e-8
Identity = 70/239 (29.29%), Postives = 109/239 (45.61%), Query Frame = 2

Query:  386 PNSPFSSHF-DSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNS---LLQSNQKV--------------------LLELETALMAPDDNEVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            P+  +  +F DS T     D   QH  G   SG S S   SL++  Y  R V    S++ +L L S   S   LL   Q V                    + ELE AL+  +D+++        +++ E  S      W+++++  Q+  S     +SS  SN   HV  +     E  +Q  P    KQ+LI+CA+A+SE   ++   ++   + +VSI G+P QR+ AY+VEGL A
Sbjct:   66 PSQSYEKYFLDSPT-----DEFVQHPIG---SGASVSSFGSLDSFPYQSRPVLGC-SMEFQLPLDSTSTSSTRLLGDYQAVSYSPSMDVVEEFDDEQMRSKIQELERALLGDEDDKMVGI-----DNLMEIDSE-----WSYQNESEQHQDSPKE--SSSADSNS--HVSSK-----EVVSQATP----KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAA 272

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.920e-8
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 2

Query:  875 DLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            DLK +L+ACAKA+SENN       +   + +VSI+GEPIQRLGAY++EGLVA
Sbjct:   49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVA 100

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
Match: SCL5_ARATH (Scarecrow-like protein 5 OS=Arabidopsis thaliana GN=SCL5 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.621e-7
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 2

Query:  875 DLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            DLK +L  CAKA+   + +  D LI   + +VS++GEP+QRLGAY++EGLVA
Sbjct:  226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVA 277

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: B9I7E1_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS56 PE=4 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 6.948e-68
Identity = 146/266 (54.89%), Postives = 185/266 (69.55%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSA-FSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQ---SNQKV---LLELETALMAPDDN-EVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            M+S Q + + V  AG  Y SS+P++PS+PNR+ G+LK  IGNSP+SPF + FD DT++A  SDSQE ++S + LSG+SPS NSSLE+N Y +R   SV+   E LQL+S   S LQ   S+Q +   L ELETALM PDD+ E+ TSN+SLG+S    TS Q+ R W    Q S  IQ+Q S+V+  RQ  E  HVEKR+K  EE    G P  DLKQLLIACAKA++ENN   FD L E A++VVSI+GEPIQRLGAY++EGLVA
Sbjct:    1 MESHQYFGYGVTGAGLSYSSSYPSVPSIPNRLFGSLKFDIGNSPSSPFYTEFDCDTYTATLSDSQECYSSTDNLSGVSPSRNSSLESNSYFNRPSPSVDCRIESLQLFSGGTSSLQDASSSQNIKHALQELETALMGPDDDDELNTSNASLGDSSTPQTSDQKPRAWR---QGSHVIQNQTSFVSRQRQLGEGAHVEKRQKSMEEGPLHGIPPGDLKQLLIACAKALAENNVSAFDNLTEKARSVVSISGEPIQRLGAYLIEGLVA 263

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: B9S9Z5_RICCO (Chitin-inducible gibberellin-responsive protein, putative OS=Ricinus communis GN=RCOM_0180000 PE=4 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 2.732e-64
Identity = 139/259 (53.67%), Postives = 174/259 (67.18%), Query Frame = 2

Query:  257 MDSQQLYSFN-VNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQSNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            M+S  L+ ++ V  AG  Y SS+P  PS+PNR+ G  +  IGNSPNSPFS+ FD DT +  SDS EQ++  E LSG SPS NSSLE+N+Y H    S+        L  A +   Q+ +  LL+LETALM PDD +++  N++LGES R  TSGQR R W  E Q S+ IQ QPS+V+  RQ+ E   VEK  K  EE+  Q  P  +LKQLLIACAKA+SENN  +FDRLIE A+  VSI+GEPIQRLGAY+VEGLVA
Sbjct:    1 MESHPLFRYSSVTGAGISYSSSYPIAPSIPNRLSGPFQFAIGNSPNSPFSNQFDCDTITTLSDSTEQYSPTENLSGASPSCNSSLESNNYFHHRSPSL--------LQDANSG--QNIKHRLLQLETALMGPDDEDISMPNNALGESSRPQTSGQRTRAWCQERQGSRVIQPQPSFVSRQRQACEGSSVEKYHKGIEETGLQSIPPDNLKQLLIACAKALSENNINEFDRLIEKARAAVSISGEPIQRLGAYLVEGLVA 249

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: B9I072_POPTR (GRAS family transcription factor OS=Populus trichocarpa GN=GRAS55 PE=4 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 2.165e-61
Identity = 135/266 (50.75%), Postives = 174/266 (65.41%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSA-FSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQSNQK------VLLELETALMAPDDNE-VTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            M+S Q + + V  AG  Y SS+P++PS+PNR+ G+LK+ IGNS +SPFS+ FD DT++    DSQ++++S E LSG S SY S L           SV+  +E L L+    SLLQ           LL+LET LM PDD+E V T N+ LG S R  TS Q+ R W+ + + S  IQ+Q S+V+  RQ  E  HVEKR+K  EE    G P  DLKQLLIACAKA++EN   DFD+LIE A++VVSI+GEPIQRLGAY+VEGLVA
Sbjct:    1 MESHQYFGYGVTGAGLSYSSSYPSVPSMPNRLFGSLKLDIGNSTSSPFSTEFDCDTYATTLCDSQDRYSSTENLSGESSSYFSRLNP---------SVDCQRESLLLFPGGTSLLQDASSSHNIKHTLLKLETTLMGPDDDEDVNTPNTCLGGSSRPPTSDQKPRAWSQQREGSHVIQTQTSFVSRQRQFGEGAHVEKRQKEMEEVHFHGIPSGDLKQLLIACAKALAENKVNDFDKLIEKARSVVSISGEPIQRLGAYLVEGLVA 257

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: C6ZH46_CAPAN (Scarecrow-like protein OS=Capsicum annuum GN=SCL1 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 7.969e-56
Identity = 128/264 (48.48%), Postives = 163/264 (61.74%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQ------SNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            M+S  LY + V  A   Y  S  T PS+PNR+LG LK   G SPNSPF ++FD  T +  SDS EQH+S E +SG S S NSSL+ +HY  R   S +  +  L + S   SLLQ      + +  LL+LETALM P+  E TTS+ S GE  +  TSGQ   +W+ + Q  + I SQPS V     S   +  EKR K  E+   QG P  +LKQLLIACA+A++ENN  DF++LI  A+N VSI G+PI+RLGAYIVEGLVA
Sbjct:    1 MESHHLYGYGVTGANLSYAYSKTTTPSIPNRLLGTLKFDSGYSPNSPFVNYFDPGTPTTLSDSLEQHSSTENISGTSCSSNSSLDYSHYFRRPSPSPDFRQNSLLVCSGETSLLQYANHSHNVKHALLQLETALMGPE--EATTSSPSAGEIQQPQTSGQSSGMWSQDGQVLRRIGSQPSPVPIFGISGNRIQSEKRHKAMEDFPVQGIPSGNLKQLLIACARALAENNLNDFEQLIAKARNAVSITGDPIERLGAYIVEGLVA 262

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: B2CZJ0_CAPAN (Putative scarecrow protein OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 7.969e-56
Identity = 128/264 (48.48%), Postives = 163/264 (61.74%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQ------SNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            M+S  LY + V  A   Y  S  T PS+PNR+LG LK   G SPNSPF ++FD  T +  SDS EQH+S E +SG S S NSSL+ +HY  R   S +  +  L + S   SLLQ      + +  LL+LETALM P+  E TTS+ S GE  +  TSGQ   +W+ + Q  + I SQPS V     S   +  EKR K  E+   QG P  +LKQLLIACA+A++ENN  DF++LI  A+N VSI G+PI+RLGAYIVEGLVA
Sbjct:    1 MESHHLYGYGVTGANLSYAYSKTTTPSIPNRLLGTLKFDSGYSPNSPFVNYFDPGTPTTLSDSLEQHSSTENISGTSCSSNSSLDYSHYFRRPSPSPDFRQNSLLVCSGETSLLQYANHSHNVKHALLQLETALMGPE--EATTSSPSAGEIQQPQTSGQSSGMWSQDGQVLRRIGSQPSPVPIFGISGNRIQSEKRHKAMEDFPVQGIPSGNLKQLLIACARALAENNLNDFEQLIAKARNAVSITGDPIERLGAYIVEGLVA 262

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: Q00LP6_SOLLC (GRAS2 OS=Solanum lycopersicum GN=GRAS2 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.359e-55
Identity = 124/265 (46.79%), Postives = 167/265 (63.02%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQ------SNQKVLLELETALMAPDDNEVTTSNSSLGESVR-ETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            M+S  LY +       PY  S  T PS+PNR+LG LK   GNSPNSPF+++ D  T +  SDS EQH+S E +SG SP  NSS + NHY  R   S +     L +YS  NSLLQ      + +  LL+LETALM P+  EVTTS+ S GE  + + + GQR  +W+ + Q    I++QPS+V+    S + +  E+  K   +  +QG P  +LK+LLIACA+A++ENN  DF++LI  A++ VSI G+PIQRLGAYIVEGLVA
Sbjct:    1 MESHNLYGYGATDVNLPYSYSMTTTPSIPNRLLGILKFDSGNSPNSPFANYNDPGTPTTLSDSLEQHSSTENISGTSPCSNSSRDYNHYFCRPSPSPDIHHNNLLVYSGDNSLLQYANHSHNMKHALLQLETALMGPE--EVTTSSPSAGEIQQPQASGGQRSGMWHQDGQVPYRIETQPSHVSVFGISGDIIQSEEHHKPMVDYPSQGIPFGNLKELLIACARALAENNLDDFEKLIAKARSAVSITGDPIQRLGAYIVEGLVA 263

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: D4QD66_DIACA (GRAS family transcription factor OS=Dianthus caryophyllus GN=DcGRAS1 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 9.457e-41
Identity = 108/259 (41.70%), Postives = 148/259 (57.14%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQ-SNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            MDS Q++ ++V  +   Y+++  T PSLPN++ G LK     SP SPFSS FD DT +  SDS+E+ +S E  S  S S NS L+ N+    + +  N L     + S +  +   S +  L ELETALM  +   ++T   S+G         QR R W+ +   SQ  Q Q S  +  R+S +    EKR K  E    Q  P  +LKQLLI CA+A+SEN   DF++L+E AK  VSI+GEPIQRLGAY++EGLVA
Sbjct:    1 MDSHQIFGYSVTGSDSTYITAQCTPPSLPNKLFGPLKFSFRESPISPFSSQFDCDTLTTLSDSKERLSSTESFSVKSSSCNSPLDNNN----NNNYYNGLNSSPSIDSPQGPVYGVSMRHALQELETALMGDETTPISTP--SMGGIRPTQLPTQRSRSWSRDPSVSQGGQVQSSSTSGGRRSEDEGQSEKRHKSMEVLLQQSMPSGNLKQLLIECARALSENRIDDFEKLVEQAKGEVSISGEPIQRLGAYMIEGLVA 253

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: Q0D5P2_ORYSJ (Os07g0545800 protein OS=Oryza sativa subsp. japonica GN=Os07g0545800 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.265e-25
Identity = 96/275 (34.91%), Postives = 142/275 (51.64%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRI--LGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSG--ISPSYNSSLETNHYMHRSVSSVNSLKERLQ-----LYSARNSLLQSNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTS-GQRHRLWNHEHQE-------SQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            MD  QL  + +  A   Y    PT  +L N       LK    +SP +P SS F+ D  SA +++ +  +S E +S   ISP    S       +R    +  L+E +Q     LY+       + Q  L E+ET LMAPD ++ TTS     E ++      QR R W+HE ++       SQ+      Y T+S +       +++R+L E+      P   +KQLL  CA+A+SE+ T++F +L++ A+ VVSINGEPIQRLGAY++EGLVA
Sbjct:    1 MDLHQLLKYRLTGANVVY--EIPTENNLQNSPWQANPLKYEFSDSPYTPLSSQFECDNLSALTNTPDNQSSTETISAQPISPLEADS------SYRQAGIL--LQENIQVGADPLYATSR---HNMQHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHESRQPLPGVGRSQFASG--GYPTASYEFRPE---KRQRELRED------PQIIVKQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVA 251

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: A2YMC9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26385 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.715e-24
Identity = 86/234 (36.75%), Postives = 127/234 (54.27%), Query Frame = 2

Query:  362 LKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSG--ISP-SYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQSNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTS-GQRHRLWNHEHQE-------SQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            LK    +SP +P SS F+ D  SA +++ +  +S E +S   ISP   +SS      + R    V +  + L   S  N      Q  L E+ET LMAPD ++ TTS     E ++      QR R W+HE ++       SQ+      Y T+S +       +++R+L E+      P   +KQLL  CA+A+SE+ T++F +L++ A+ VVSINGEPIQRLGAY++EGLVA
Sbjct:   34 LKYEFSDSPYTPLSSQFECDNLSALTNTPDNQSSTETISAQPISPLEADSSYRQTGILLRENIQVGA--DPLYATSRHNM-----QHALREIETVLMAPDTDDATTSTKHEFEEIKPAQLVRQRSRTWSHESRQPLPGVGRSQFASG--GYPTASYEFRPE---KRQRELRED------PQMIVKQLLTRCAEALSEDRTEEFHKLVQEARGVVSINGEPIQRLGAYLLEGLVA 249

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Match: C5XAU2_SORBI (Putative uncharacterized protein Sb02g035680 OS=Sorghum bicolor GN=Sb02g035680 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.050e-23
Identity = 91/264 (34.47%), Postives = 129/264 (48.86%), Query Frame = 2

Query:  257 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRI--LGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSG--ISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQSNQKVLLELETALMAPDDNEVTTSNSSLGESVRETT-SGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKR-RKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            MD  QL  + +  A   Y   FPT  +L N       LK     SP +P SS  + D  SA S++ +  +S E +S   ISP    S     Y   ++   N+      LY+       + Q  L E+ET LMAPD  +  TS     E  +      QR R W+HE ++      +  + +    ++     EKR R+L E+      P S +KQLL  CA+A+SE   ++F  L++ A+ VVSI GEPIQRLGAY++EGLVA
Sbjct:    1 MDLHQLLKYRLTGANVFY--EFPTENNLANTPWPASPLKSEFSGSPYTPLSSQLECDNLSALSNTPDNQSSTETISAQPISPLEVDS----SYRQAAILRENTQVRPDPLYATSR---HNMQHALREIETVLMAPDAEDAATSTKHEFEEHKPAQLMRQRSRTWSHESRQPSPGVVRTQFASGYPTASYEFRPEKRLRELRED------PQSMVKQLLTKCAEALSEERIEEFLTLVQQARGVVSITGEPIQRLGAYLLEGLVA 249

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TAIR peptide
Match: AT5G48150.2 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 62.7734 bits (151), Expect = 3.721e-10
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 2

Query:  848 SSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            S+ +     DL+  L++CAKAMSEN+      ++E  + +VS++GEPIQRLGAY++EGLVA
Sbjct:  109 STLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVA 169

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TAIR peptide
Match: AT5G48150.1 (| Symbols: PAT1 | GRAS family transcription factor | chr5:19522497-19524053 REVERSE LENGTH=490)

HSP 1 Score: 62.7734 bits (151), Expect = 3.721e-10
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 2

Query:  848 SSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            S+ +     DL+  L++CAKAMSEN+      ++E  + +VS++GEPIQRLGAY++EGLVA
Sbjct:  109 STLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVA 169

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TAIR peptide
Match: AT1G21450.1 (| Symbols: SCL1 | SCARECROW-like 1 | chr1:7509721-7511502 FORWARD LENGTH=593)

HSP 1 Score: 60.8474 bits (146), Expect = 1.414e-9
Identity = 70/239 (29.29%), Postives = 109/239 (45.61%), Query Frame = 2

Query:  386 PNSPFSSHF-DSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNS---LLQSNQKV--------------------LLELETALMAPDDNEVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            P+  +  +F DS T     D   QH  G   SG S S   SL++  Y  R V    S++ +L L S   S   LL   Q V                    + ELE AL+  +D+++        +++ E  S      W+++++  Q+  S     +SS  SN   HV  +     E  +Q  P    KQ+LI+CA+A+SE   ++   ++   + +VSI G+P QR+ AY+VEGL A
Sbjct:   66 PSQSYEKYFLDSPT-----DEFVQHPIG---SGASVSSFGSLDSFPYQSRPVLGC-SMEFQLPLDSTSTSSTRLLGDYQAVSYSPSMDVVEEFDDEQMRSKIQELERALLGDEDDKMVGI-----DNLMEIDSE-----WSYQNESEQHQDSPKE--SSSADSNS--HVSSK-----EVVSQATP----KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAA 272

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TAIR peptide
Match: AT2G04890.1 (| Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-1721816 REVERSE LENGTH=413)

HSP 1 Score: 60.4622 bits (145), Expect = 1.847e-9
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 2

Query:  875 DLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            DLK +L+ACAKA+SENN       +   + +VSI+GEPIQRLGAY++EGLVA
Sbjct:   49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVA 100

[Close]

BLAST of Cicer_arietinum_v1_Contig562 vs. TAIR peptide
Match: AT1G50600.1 (| Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-18739547 REVERSE LENGTH=597)

HSP 1 Score: 56.225 bits (134), Expect = 3.483e-8
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 2

Query:  875 DLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVA 1030
            DLK +L  CAKA+   + +  D LI   + +VS++GEP+QRLGAY++EGLVA
Sbjct:  226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVA 277

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig562 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig562 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 6


Match Name	E-value	Identity	Description
CIGR1_ORYSJ	2.667e-26	34.91	Chitin-inducible gibberellin-responsive protein 1 ...	[more]
CIGR2_ORYSJ	1.856e-11	34.25	Chitin-inducible gibberellin-responsive protein 2 ...	[more]
PAT1_ARATH	3.869e-9	49.18	Scarecrow-like transcription factor PAT1 OS=Arabid...	[more]
SCL1_ARATH	1.470e-8	29.29	Scarecrow-like protein 1 OS=Arabidopsis thaliana G...	[more]
SCL21_ARATH	1.920e-8	59.62	Scarecrow-like protein 21 OS=Arabidopsis thaliana ...	[more]
SCL5_ARATH	3.621e-7	51.92	Scarecrow-like protein 5 OS=Arabidopsis thaliana G...	[more]

BLAST of Cicer_arietinum_v1_Contig562 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9I7E1_POPTR	6.948e-68	54.89	GRAS family transcription factor OS=Populus tricho...	[more]
B9S9Z5_RICCO	2.732e-64	53.67	Chitin-inducible gibberellin-responsive protein, p...	[more]
B9I072_POPTR	2.165e-61	50.75	GRAS family transcription factor OS=Populus tricho...	[more]
C6ZH46_CAPAN	7.969e-56	48.48	Scarecrow-like protein OS=Capsicum annuum GN=SCL1 ...	[more]
B2CZJ0_CAPAN	7.969e-56	48.48	Putative scarecrow protein OS=Capsicum annuum PE=2...	[more]
Q00LP6_SOLLC	1.359e-55	46.79	GRAS2 OS=Solanum lycopersicum GN=GRAS2 PE=2 SV=1	[more]
D4QD66_DIACA	9.457e-41	41.70	GRAS family transcription factor OS=Dianthus caryo...	[more]
Q0D5P2_ORYSJ	4.265e-25	34.91	Os07g0545800 protein OS=Oryza sativa subsp. japoni...	[more]
A2YMC9_ORYSI	4.715e-24	36.75	Putative uncharacterized protein OS=Oryza sativa s...	[more]
C5XAU2_SORBI	1.050e-23	34.47	Putative uncharacterized protein Sb02g035680 OS=So...	[more]

BLAST of Cicer_arietinum_v1_Contig562 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G48150.2	3.721e-10	49.18	\| Symbols: PAT1 \| GRAS family transcription factor...	[more]
AT5G48150.1	3.721e-10	49.18	\| Symbols: PAT1 \| GRAS family transcription factor...	[more]
AT1G21450.1	1.414e-9	29.29	\| Symbols: SCL1 \| SCARECROW-like 1 \| chr1:7509721-...	[more]
AT2G04890.1	1.847e-9	59.62	\| Symbols: SCL21 \| SCARECROW-like 21 \| chr2:172057...	[more]
AT1G50600.1	3.483e-8	51.92	\| Symbols: SCL5 \| scarecrow-like 5 \| chr1:18737398...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 213..262 score: 2
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 187..263 score: 9

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig562 ID=Cicer_arietinum_v1_Contig562; Name=Cicer_arietinum_v1_Contig562; organism=Cicer arietinum; type=contig; length=1032bp
GGGGCGCGGCCNAGGTCTCCAAACAAGAAANNAAAATACATTGNTAANNG
TTGAAGCCGCACAAATTCACAACCAAAGTTTGAATGAACATACTCAAATA
TCAATTAGTCGGCGCTGAATTTCGTTGTTGATTTTTTCAGGTTTATATGC
TTTTGTTGAAACTATTGGCGTAAATTTTCCCATTGTTTTCTTATTTGCTA
CACCGGTTATTAGGATTTCCTCTCTCGCATAAGACAACTGATTCATCACC
AATAGTATGGACTCACAGCAACTTTATAGTTTCAATGTAAACAGTGCAGG
ATTTCCTTACATGTCATCTTTTCCCACTATTCCATCACTGCCAAATCGTA
TTCTTGGAAACTTGAAAGTCGGTATTGGAAACTCGCCTAATTCACCGTTT
TCATCTCATTTCGATTCTGATACTCATTCTGCATTTAGTGACAGCCAGGA
GCAACACAACTCAGGAGAAATTCTTTCTGGTATAAGCCCCTCTTATAACT
CGTCACTCGAAACCAATCATTATATGCATAGATCAGTTTCATCTGTGAAC
AGTCTCAAAGAAAGGTTGCAACTATATTCTGCTAGAAATTCACTTCTACA
AAGTAACCAGAAAGTGTTGTTGGAACTAGAAACTGCTCTGATGGCACCCG
ATGATAACGAAGTTACCACGTCTAATTCTTCGTTGGGCGAGAGTGTCAGA
GAGACTACATCGGGTCAGAGACATAGATTGTGGAACCACGAGCACCAGGA
GTCACAATATATTCAAAGTCAACCATCTTATGTTACAAGCAGCAGGCAAT
CAAATGAAGCCGTGCATGTAGAGAAACGACGAAAGTTGGAGGAGGAATCA
TCAACACAAGGGTTTCCATTGAGCGATTTGAAGCAATTGCTGATTGCGTG
TGCTAAAGCCATGTCTGAAAACAACACAAAAGATTTTGACCGATTGATAG
AAATGGCTAAAAATGTTGTGTCTATCAATGGGGAGCCGATCCAGAGGCTC
GGTGCTTATATTGTAGAAGGGCTTGTTGCAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR005202	TF_GRAS

Search form

Cicer_arietinum_v1_Contig562