Cicer_arietinum_v1_Contig665

Contig Overview


Name	Cicer_arietinum_v1_Contig665
Unique Name	Cicer_arietinum_v1_Contig665
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	461

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
GR913495	EST	GR913495:1..461 +
GR913431	EST	GR913431:1..459 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR913495	GR913495	Cicer arietinum	EST
GR913431	GR913431	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT1_SOYBN (Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.455e-32
Identity = 67/96 (69.79%), Postives = 80/96 (83.33%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSE-FEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYK 357
            MEFWG EVKVG+TV VDP +  ++ IH+SQ ALGE KKDKP++PVVL+LKVG++K+VLGTL +D IP  SL+LVLD D ELSH SKSASV FCGYK
Sbjct:    1 MEFWGVEVKVGQTVTVDPMDPVDSYIHISQVALGEAKKDKPNEPVVLYLKVGEQKIVLGTLSRDGIPHLSLDLVLDSDSELSHTSKSASVFFCGYK 96

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT1_SOLCH (Histone deacetylase HDT1 OS=Solanum chacoense GN=HDT1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.030e-24
Identity = 59/99 (59.60%), Postives = 71/99 (71.72%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            MEFWGAEVK GE + V P +    +HLSQA+LGE KKDK S+ V L + +  KKLVLGTL  +K+PQ   +LV D+DFELSHN KS SV+F GYKA  P
Sbjct:    1 MEFWGAEVKSGEPLTVQPGD-GMVLHLSQASLGELKKDK-SESVCLSVNIDGKKLVLGTLNSEKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNP 97

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT2_MAIZE (Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.455e-22
Identity = 55/99 (55.56%), Postives = 68/99 (68.69%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            MEFWG EVK G TVK +P      +H+SQAALGE+KK   SD  ++++KV DKKL +GTL  DK PQ   +LV +K+FELSH SK+ SV F GYK   P
Sbjct:    1 MEFWGLEVKPGSTVKCEPGH-GFILHVSQAALGESKK---SDSALMYVKVDDKKLAIGTLSIDKYPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQP 95

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT3_MAIZE (Histone deacetylase HDT3 OS=Zea mays GN=HDT3 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.482e-22
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            MEFWG EVK G TVK +P  +   +HLSQAALGE+KK   SD  ++++K+ D+KL +GTL  DK P    +L+ DK+FELSH SK+ SV F GYK   P
Sbjct:    1 MEFWGLEVKPGSTVKCEPG-YGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLSVDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQP 95

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT1_MAIZE (Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.482e-22
Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            MEFWG EVK G TVK +P  +   +HLSQAALGE+KK   SD  ++++K+ D+KL +GTL  DK P    +L+ DK+FELSH SK+ SV F GYK   P
Sbjct:    1 MEFWGLEVKPGSTVKCEPG-YGFVLHLSQAALGESKK---SDNALMYVKIDDQKLAIGTLSVDKNPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQP 95

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT3_ARATH (Histone deacetylase HDT3 OS=Arabidopsis thaliana GN=HDT3 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 3.354e-19
Identity = 46/95 (48.42%), Postives = 67/95 (70.53%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYK 357
            MEFWG EVK G+ + +DP   +  +H+SQ ALGE+K +  ++P+ L++ VG  KL++GTL  +K PQ S E+VL+++F LSH  K+ SV F GYK
Sbjct:    1 MEFWGVEVKNGKPLHLDPG-LDRLVHISQVALGESKNNV-TEPIQLYVTVGSDKLLIGTLSHEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYK 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT1_ARATH (Histone deacetylase HDT1 OS=Arabidopsis thaliana GN=HDT1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 9.759e-19
Identity = 52/95 (54.74%), Postives = 64/95 (67.37%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYK 357
            MEFWG EVK G+ V V P E    IH+SQA+LGE K +K  + V L +KVG++ LVLGTL  + IPQ   +LV DK+FELSH     SV+F GYK
Sbjct:    1 MEFWGIEVKSGKPVTVTPEE-GILIHVSQASLGECK-NKKGEFVPLHVKVGNQNLVLGTLSTENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYK 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT2_ARATH (Histone deacetylase HDT2 OS=Arabidopsis thaliana GN=HDT2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.275e-18
Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKA 360
            MEFWG  V      KV P E ++ +H+SQA+L  T K   S  VVL + VG  KLV+GTL +DK PQ S +LV DK+FELSH+   A+VHF GYK+
Sbjct:    1 MEFWGVAVTPKNATKVTPEE-DSLVHISQASLDCTVKSGES--VVLSVTVGGAKLVIGTLSQDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKS 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Match: HDT4_ARATH (Histone deacetylase HDT4 OS=Arabidopsis thaliana GN=HDT4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.041e-12
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKK--LVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAY 363
            MEFWG E+K G+  KV   +    +H SQ  LG+ +K K  +   +++K+GD +   ++G L   K PQ S++L L  +FE+SHNS S SV+  GY+ +
Sbjct:    1 MEFWGIEIKPGKPFKVIQKD-GFMVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNL-SQKFPQFSIDLYLGHEFEISHNSTS-SVYLIGYRTF 96

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: C6TJ33_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.752e-43
Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYY-PGXXXXXXXXXXXXXXIPLANEENGKLETK 456
            MEFWGAEVKVGE+VKVDP+EFEACIHLSQAALGE KKDK ++PVVL+LKVG +K VLGTL ++KIPQ  LELVL+K+FELSHNSK+ASVHFCGYKA+Y  G              +PL   ENGK ETK
Sbjct:    1 MEFWGAEVKVGESVKVDPAEFEACIHLSQAALGEAKKDKSNEPVVLYLKVGQQKFVLGTLSREKIPQIPLELVLEKEFELSHNSKNASVHFCGYKAFYDTGDDSEEDEFTDSEEDVPLLKAENGKPETK 129

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: C6TGQ0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.752e-43
Identity = 91/131 (69.47%), Postives = 104/131 (79.39%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP---GXXXXXXXXXXXXXXIPLANEENGKLETK 456
            MEFWGAEVKVGE+VKVDP+EFEACIHLSQAALGE KKDKP +PVVL++KVG++K VLGTL ++KIPQ SLELVL+K+FELSH+SKSASVHFCGYKAYY                   +PL N ENGK ETK
Sbjct:    1 MEFWGAEVKVGESVKVDPAEFEACIHLSQAALGEAKKDKP-EPVVLYMKVGEQKFVLGTLSREKIPQISLELVLEKEFELSHSSKSASVHFCGYKAYYDADNSDEDEFTDSDEDDEDVPLINTENGKPETK 130

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: Q2PF09_TRIPR (Putative Nucleolar histone deacetylase OS=Trifolium pratense PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.122e-28
Identity = 66/100 (66.00%), Postives = 80/100 (80.00%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYPG 372
            MEFWGAEVKVGE+VKVDP      IH+SQAALGE KKDK ++PVV+++KV  +KLVLGTLIKD IP T+L +VLD+  ELSHNSK+A+V+F GYK    G
Sbjct:    5 MEFWGAEVKVGESVKVDPEL--GYIHISQAALGEVKKDKATEPVVVYVKVDGQKLVLGTLIKDAIPHTTLNIVLDRVAELSHNSKNAAVYFSGYKVLDDG 102

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: B9MYK2_POPTR (Histone deacetylase OS=Populus trichocarpa GN=HDT902 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.809e-26
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 1

Query:   70 TMEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            +MEFWG EVK GE +KV+P +F   IHLSQAALGE+ K K ++ V LFLK+ +KKLVLGTL  DKIPQ S +LV +++FELSHN K+ SV FCGY+A  P
Sbjct:    3 SMEFWGVEVKAGEPLKVEPKDFYM-IHLSQAALGESSK-KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 100

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: A9P9Y3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.809e-26
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 1

Query:   70 TMEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            +MEFWG EVK GE +KV+P +F   IHLSQAALGE+ K K ++ V LFLK+ +KKLVLGTL  DKIPQ S +LV +++FELSHN K+ SV FCGY+A  P
Sbjct:    3 SMEFWGVEVKAGEPLKVEPKDFYM-IHLSQAALGESSK-KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 100

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: A9P950_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.809e-26
Identity = 62/100 (62.00%), Postives = 77/100 (77.00%), Query Frame = 1

Query:   70 TMEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            +MEFWG EVK GE +KV+P +F   IHLSQAALGE+ K K ++ V LFLK+ +KKLVLGTL  DKIPQ S +LV +++FELSHN K+ SV FCGY+A  P
Sbjct:    3 SMEFWGVEVKAGEPLKVEPKDFYM-IHLSQAALGESSK-KGNESVPLFLKLDEKKLVLGTLSPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIP 100

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: D7SN59_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031404001 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.414e-25
Identity = 60/99 (60.61%), Postives = 74/99 (74.75%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            MEFWG EVK GE+ KV  SE +  +HLSQAALGE+KK+K ++ V LFLK+  +KLVLGTL+   IPQ S +LV DK+FELSHN K+ SV F GYK+  P
Sbjct:    1 MEFWGVEVKAGESFKVK-SEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLLPANIPQLSFDLVFDKEFELSHNWKNGSVFFMGYKSVLP 98

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: Q0Z9W3_WHEAT (Histone deacetylase HDAC2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.284e-24
Identity = 63/134 (47.01%), Postives = 80/134 (59.70%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYPG------XXXXXXXXXXXXXXIPLANEENGKLETK 456
            MEFWG EVK  ++VKV P + +  +HLSQ ALGE KKD   D   +F+K+GD+KL +GTL  DK PQ   +LV +K+FELSHNSK++SV F GYK + P                     IP   +ENGK E K
Sbjct:    1 MEFWGLEVKPNQSVKVSPDD-DHFLHLSQGALGEVKKD---DKATMFVKIGDQKLAIGTLSTDKFPQIQFDLVFEKEFELSHNSKTSSVFFSGYKVFQPAEGDEMDFDSEDDSEEEEDKIIPALTKENGKPEAK 130

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: Q9M4T5_ORYSA (Putative histone deacetylase HD2 OS=Oryza sativa PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.736e-24
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            MEFWG EVK G+TVK +P + E  +HLSQAALGE+KK   SD  V+++K  D+KLV+GTL  DK PQ   +LV DK+FELSH SK+ASV F GYK   P
Sbjct:    1 MEFWGLEVKPGQTVKCEPED-ERFLHLSQAALGESKKG--SDNAVMYVKTDDQKLVIGTLSADKFPQIQFDLVFDKEFELSHTSKTASVFFSGYKVSQP 96

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Match: Q688F7_ORYSJ (Putative histone deacetylase HD2 OS=Oryza sativa subsp. japonica GN=OSJNBa0035I01.3 PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.736e-24
Identity = 59/99 (59.60%), Postives = 72/99 (72.73%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAYYP 369
            MEFWG EVK G+TVK +P + E  +HLSQAALGE+KK   SD  V+++K  D+KLV+GTL  DK PQ   +LV DK+FELSH SK+ASV F GYK   P
Sbjct:    1 MEFWGLEVKPGQTVKCEPED-ERFLHLSQAALGESKKG--SDNAVMYVKTDDQKLVIGTLSADKFPQIQFDLVFDKEFELSHTSKTASVFFSGYKVSQP 96

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Match: AT5G03740.1 (| Symbols: HD2C, HDT3 | histone deacetylase 2C | chr5:981994-983961 FORWARD LENGTH=294)

HSP 1 Score: 93.9745 bits (232), Expect = 3.910e-20
Identity = 46/95 (48.42%), Postives = 67/95 (70.53%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYK 357
            MEFWG EVK G+ + +DP   +  +H+SQ ALGE+K +  ++P+ L++ VG  KL++GTL  +K PQ S E+VL+++F LSH  K+ SV F GYK
Sbjct:    1 MEFWGVEVKNGKPLHLDPG-LDRLVHISQVALGESKNNV-TEPIQLYVTVGSDKLLIGTLSHEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYK 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Match: AT3G44750.2 (| Symbols: HDA3 | histone deacetylase 3 | chr3:16298045-16299585 FORWARD LENGTH=242)

HSP 1 Score: 92.4337 bits (228), Expect = 1.138e-19
Identity = 52/95 (54.74%), Postives = 64/95 (67.37%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYK 357
            MEFWG EVK G+ V V P E    IH+SQA+LGE K +K  + V L +KVG++ LVLGTL  + IPQ   +LV DK+FELSH     SV+F GYK
Sbjct:    1 MEFWGIEVKSGKPVTVTPEE-GILIHVSQASLGECK-NKKGEFVPLHVKVGNQNLVLGTLSTENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYK 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Match: AT3G44750.1 (| Symbols: HD2A, ATHD2A, HDA3, HDT1 | histone deacetylase 3 | chr3:16298045-16299585 FORWARD LENGTH=245)

HSP 1 Score: 92.4337 bits (228), Expect = 1.138e-19
Identity = 52/95 (54.74%), Postives = 64/95 (67.37%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYK 357
            MEFWG EVK G+ V V P E    IH+SQA+LGE K +K  + V L +KVG++ LVLGTL  + IPQ   +LV DK+FELSH     SV+F GYK
Sbjct:    1 MEFWGIEVKSGKPVTVTPEE-GILIHVSQASLGECK-NKKGEFVPLHVKVGNQNLVLGTLSTENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYK 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Match: AT5G22650.2 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=305)

HSP 1 Score: 92.0485 bits (227), Expect = 1.486e-19
Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKA 360
            MEFWG  V      KV P E ++ +H+SQA+L  T K   S  VVL + VG  KLV+GTL +DK PQ S +LV DK+FELSH+   A+VHF GYK+
Sbjct:    1 MEFWGVAVTPKNATKVTPEE-DSLVHISQASLDCTVKSGES--VVLSVTVGGAKLVIGTLSQDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKS 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Match: AT5G22650.1 (| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, ATHD2 | histone deacetylase 2B | chr5:7534120-7536054 FORWARD LENGTH=306)

HSP 1 Score: 92.0485 bits (227), Expect = 1.486e-19
Identity = 50/96 (52.08%), Postives = 63/96 (65.62%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKKLVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKA 360
            MEFWG  V      KV P E ++ +H+SQA+L  T K   S  VVL + VG  KLV+GTL +DK PQ S +LV DK+FELSH+   A+VHF GYK+
Sbjct:    1 MEFWGVAVTPKNATKVTPEE-DSLVHISQASLDCTVKSGES--VVLSVTVGGAKLVIGTLSQDKFPQISFDLVFDKEFELSHSGTKANVHFIGYKS 93

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Match: AT2G27840.1 (| Symbols: HDT4, HDA13, HDT04 | histone deacetylase-related / HD-related | chr2:11862085-11863707 FORWARD LENGTH=203)

HSP 1 Score: 70.8626 bits (172), Expect = 3.545e-13
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 1

Query:   73 MEFWGAEVKVGETVKVDPSEFEACIHLSQAALGETKKDKPSDPVVLFLKVGDKK--LVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAY 363
            MEFWG E+K G+  KV   +    +H SQ  LG+ +K K  +   +++K+GD +   ++G L   K PQ S++L L  +FE+SHNS S SV+  GY+ +
Sbjct:    1 MEFWGIEIKPGKPFKVIQKD-GFMVHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNL-SQKFPQFSIDLYLGHEFEISHNSTS-SVYLIGYRTF 96

[Close]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Match: AT2G27840.2 (| Symbols: HDT4, HDA13, HDT04 | histone deacetylase-related / HD-related | chr2:11862595-11863707 FORWARD LENGTH=181)

HSP 1 Score: 56.225 bits (134), Expect = 9.036e-9
Identity = 29/75 (38.67%), Postives = 47/75 (62.67%), Query Frame = 1

Query:  145 IHLSQAALGETKKDKPSDPVVLFLKVGDKK--LVLGTLIKDKIPQTSLELVLDKDFELSHNSKSASVHFCGYKAY 363
            +H SQ  LG+ +K K  +   +++K+GD +   ++G L   K PQ S++L L  +FE+SHNS S SV+  GY+ +
Sbjct:    2 VHASQVTLGDVEKVKKDETFAVYVKIGDDENGFMIGNL-SQKFPQFSIDLYLGHEFEISHNSTS-SVYLIGYRTF 74

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig665 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 9


Match Name	E-value	Identity	Description
HDT1_SOYBN	3.455e-32	69.79	Histone deacetylase HDT1 OS=Glycine max GN=HDT1 PE...	[more]
HDT1_SOLCH	2.030e-24	59.60	Histone deacetylase HDT1 OS=Solanum chacoense GN=H...	[more]
HDT2_MAIZE	1.455e-22	55.56	Histone deacetylase HDT2 OS=Zea mays GN=HDT2 PE=1 ...	[more]
HDT3_MAIZE	2.482e-22	53.54	Histone deacetylase HDT3 OS=Zea mays GN=HDT3 PE=2 ...	[more]
HDT1_MAIZE	2.482e-22	53.54	Histone deacetylase HDT1 OS=Zea mays GN=HDT1 PE=1 ...	[more]
HDT3_ARATH	3.354e-19	48.42	Histone deacetylase HDT3 OS=Arabidopsis thaliana G...	[more]
HDT1_ARATH	9.759e-19	54.74	Histone deacetylase HDT1 OS=Arabidopsis thaliana G...	[more]
HDT2_ARATH	1.275e-18	52.08	Histone deacetylase HDT2 OS=Arabidopsis thaliana G...	[more]
HDT4_ARATH	3.041e-12	39.39	Histone deacetylase HDT4 OS=Arabidopsis thaliana G...	[more]

BLAST of Cicer_arietinum_v1_Contig665 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6TJ33_SOYBN	2.752e-43	68.99	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TGQ0_SOYBN	2.752e-43	69.47	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q2PF09_TRIPR	1.122e-28	66.00	Putative Nucleolar histone deacetylase OS=Trifoliu...	[more]
B9MYK2_POPTR	6.809e-26	62.00	Histone deacetylase OS=Populus trichocarpa GN=HDT9...	[more]
A9P9Y3_POPTR	6.809e-26	62.00	Putative uncharacterized protein OS=Populus tricho...	[more]
A9P950_POPTR	6.809e-26	62.00	Putative uncharacterized protein OS=Populus tricho...	[more]
D7SN59_VITVI	4.414e-25	60.61	Whole genome shotgun sequence of line PN40024, sca...	[more]
Q0Z9W3_WHEAT	1.284e-24	47.01	Histone deacetylase HDAC2 OS=Triticum aestivum PE=...	[more]
Q9M4T5_ORYSA	3.736e-24	59.60	Putative histone deacetylase HD2 OS=Oryza sativa P...	[more]
Q688F7_ORYSJ	3.736e-24	59.60	Putative histone deacetylase HD2 OS=Oryza sativa s...	[more]

BLAST of Cicer_arietinum_v1_Contig665 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT5G03740.1	3.910e-20	48.42	\| Symbols: HD2C, HDT3 \| histone deacetylase 2C \| c...	[more]
AT3G44750.2	1.138e-19	54.74	\| Symbols: HDA3 \| histone deacetylase 3 \| chr3:162...	[more]
AT3G44750.1	1.138e-19	54.74	\| Symbols: HD2A, ATHD2A, HDA3, HDT1 \| histone deac...	[more]
AT5G22650.2	1.486e-19	52.08	\| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 \| ...	[more]
AT5G22650.1	1.486e-19	52.08	\| Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2, A...	[more]
AT2G27840.1	3.545e-13	39.39	\| Symbols: HDT4, HDA13, HDT04 \| histone deacetylas...	[more]
AT2G27840.2	9.036e-9	38.67	\| Symbols: HDT4, HDA13, HDT04 \| histone deacetylas...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 107..120 score
None	No IPR available	SEG	seg	seg	coord: 29..40 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig665 ID=Cicer_arietinum_v1_Contig665; Name=Cicer_arietinum_v1_Contig665; organism=Cicer arietinum; type=contig; length=461bp
GATTTCGAGCGGCCGCCCGGGCAGGTCTCATTTCTCTCCTAAAACCCTAA
CTAATTTCTCAATCCGATTACAATGGAATTCTGGGGTGCTGAAGTTAAGG
TGGGTGAAACTGTTAAGGTTGACCCAAGTGAATTTGAGGCATGCATTCAC
CTTTCTCAGGCTGCACTCGGAGAGACAAAGAAAGACAAACCTAGTGATCC
TGTCGTTCTTTTCTTGAAAGTTGGTGATAAAAAGCTTGTTTTGGGAACCC
TAATCAAGGATAAAATTCCCCAGACATCCCTTGAATTGGTCTTGGACAAA
GATTTTGAGCTTTCTCACAATTCAAAATCGGCTAGTGTCCATTTCTGCGG
ATACAAAGCATATTATCCCGGTGAAGATAGTGATGAAGATGACTTTACTG
ATAGTGAAGATGATATTCCCTTGGCTAATGAAGAGAATGGTAAACTCGAA
ACAAAAGTTGA

Search form

Cicer_arietinum_v1_Contig665