Cicer_arietinum_v1_Contig73

Contig Overview
NameCicer_arietinum_v1_Contig73
Unique NameCicer_arietinum_v1_Contig73
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length740
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR404367ESTGR404367:201..538 +
HO063201ESTHO063201:1..678 -
GR401832ESTGR401832:201..672 +
GR403119ESTGR403119:201..708 +
GR402198ESTGR402198:201..741 +
GR401854ESTGR401854:224..741 -
GR401831ESTGR401831:224..741 -
GR401828ESTGR401828:201..741 +
GR401853ESTGR401853:201..741 +
GR402210ESTGR402210:255..741 -
GR402555ESTGR402555:366..741 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR404367GR404367Cicer arietinumEST
HO063201HO063201Cicer arietinumEST
GR401832GR401832Cicer arietinumEST
GR403119GR403119Cicer arietinumEST
GR402198GR402198Cicer arietinumEST
GR401854GR401854Cicer arietinumEST
GR401831GR401831Cicer arietinumEST
GR401828GR401828Cicer arietinumEST
GR401853GR401853Cicer arietinumEST
GR402210GR402210Cicer arietinumEST
GR402555GR402555Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig73 vs. TrEMBL
Match: C6T305_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.019e-34
Identity = 91/154 (59.09%), Postives = 109/154 (70.78%), Query Frame = 3
Query:   33 GHQNAPQERKNEEKKDCNFKLEKASINYYLQ-PFQTNNHHGSFANYHGNDTHNWFYDPSSYNNSEFSLCEESQISFKSNVHDTTNSFVDQKSSWYSLPSHNPPSQQDNCMFTFSN-KDDRPFIFK----PSSNQIH-TKGLDLQLGLNLKSSTK 473
            GHQNA ++ + ++K+     L+  SIN YLQ PFQ+   HG FA  H +DT  WFYDPS+YNNSEF+L EE QISF SNV D  N   DQKSSWYSL SH   SQQD CMFTFSN  ++ PFIFK    P+SNQ H +K LDLQLGLNL+S+T+
Sbjct:   94 GHQNAHKKERMKKKR-----LQLQSINRYLQHPFQSK--HG-FA--HPSDTP-WFYDPSTYNNSEFTLSEEPQISFNSNVFD-ANFSCDQKSSWYSLASHPSNSQQDTCMFTFSNASNNSPFIFKPCHFPASNQSHKSKALDLQLGLNLQSNTR 235          

HSP 2 Score: 25.7942 bits (55), Expect = 3.019e-34
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2
Query:    2 KEFANSQALGG 34
            KEFANSQALGG
Sbjct:   84 KEFANSQALGG 94          
BLAST of Cicer_arietinum_v1_Contig73 vs. TrEMBL
Match: B9S2J5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0699890 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.175e-19
Identity = 61/149 (40.94%), Postives = 82/149 (55.03%), Query Frame = 3
Query:   33 GHQNAPQERKNEEKKDCNFKLEKASINYYLQPFQTNNHHGSFANYHGNDTHNWFYDPSSYNNSEFSLCEESQISFKSNVHDTTNSFVDQKSSWYSLPSHNPPSQQDNCMFTFSN----KDDRPFIFKPSSNQIHTKGLDLQLGLNLKSS 467
            GHQNA  +++  +KK    +  KASI+ YLQPFQ N       +Y+   +  WFYDPS  +  EF+L EESQ+S                  WYS      P QQD CMFT ++    +++RP I KP+S Q   K LDLQLGL+L+S+
Sbjct:  100 GHQNA-HKKERMKKKRLQLQARKASISCYLQPFQNN------LSYNCQGSTQWFYDPSC-STPEFTLYEESQVS-----------------KWYSTVPAQAPFQQDTCMFTITHPERARENRPVIRKPASKQT-CKSLDLQLGLSLQSN 222          

HSP 2 Score: 25.7942 bits (55), Expect = 5.175e-19
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2
Query:    2 KEFANSQALGG 34
            KEFANSQALGG
Sbjct:   90 KEFANSQALGG 100          
BLAST of Cicer_arietinum_v1_Contig73 vs. TrEMBL
Match: D7TNK9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_26.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00020155001 PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.919e-18
Identity = 69/158 (43.67%), Postives = 92/158 (58.23%), Query Frame = 3
Query:   33 GHQNAPQERKNEEKKDCNFKLEKASINYYLQPFQTNNHHGSFANYHGNDTHNWFYDPSSYNNSEFSLCEESQISFKSNVHDTTNSFVDQKSSWYSLPSHNPPSQQDNCMFTFSNKD----DRPFIFKPSS---NQIHTKGLDLQLGL----NLKSSTK 473
            GHQNA  +++  +KK    +  KASIN+YLQP Q NNH  SF  YHG+    WFYDPS  +       +ESQISF     D  +    Q S WY+ P+ N P QQD CMFT ++ D    ++P I KPS    ++ + K LDLQLGL    N++SS++
Sbjct:  101 GHQNA-HKKERMKKKRLQLQARKASINHYLQPLQ-NNH--SF-TYHGSAL--WFYDPSCQSPD-----DESQISFTPFDQD-AHLKKSQFSKWYAPPA-NLPLQQDTCMFTLTHPDGSGQNKPAIIKPSPLPVSKQNCKSLDLQLGLSVQPNIRSSSR 244          

HSP 2 Score: 25.7942 bits (55), Expect = 1.919e-18
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2
Query:    2 KEFANSQALGG 34
            KEFANSQALGG
Sbjct:   91 KEFANSQALGG 101          
BLAST of Cicer_arietinum_v1_Contig73 vs. TrEMBL
Match: B9HMT4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_565404 PE=4 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.650e-17
Identity = 59/150 (39.33%), Postives = 90/150 (60.00%), Query Frame = 3
Query:   33 GHQNAPQERKNEEKKDCNFKLEKASINYYLQPFQTNNHHGSFANYHGNDTHNWFYDPS-SYNNSEFSLCEESQISFKSNVHDTTNSFVDQKSSWYSLPSHNPPSQQD-NCMFTFSNKDDRPFIFKPS---SNQIHTKGLDLQLGLNLKSS 467
            GHQNA  +++  +KK    +  KAS++ YLQP+Q N    S+   +G+ T  WF+DPS S    +F+L EESQISF  N  + ++    Q S+W+++P+   P QQD    FTF++ D R   +KPS   +++   K  DLQL L+L+S+
Sbjct:  109 GHQNA-HKKERLKKKRLQLQARKASLSCYLQPYQNN---PSYNYQYGSSTTPWFFDPSCSTTPDQFTLYEESQISF--NPCEDSHLNDSQISNWHAVPAQVIPFQQDTRYKFTFTHADQRSRDYKPSPLLASKKTCKSADLQLDLSLQSN 252          

HSP 2 Score: 25.7942 bits (55), Expect = 2.650e-17
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2
Query:    2 KEFANSQALGG 34
            KEFANSQALGG
Sbjct:   99 KEFANSQALGG 109          
BLAST of Cicer_arietinum_v1_Contig73 vs. TrEMBL
Match: A5B5F1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029869 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.582e-13
Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 3
Query:   33 GHQNAPQERKNEEKKDCNFKLEKASINYYLQPFQTNNHHGSFANYHGNDTHNWFYDPSSYNNSEFSLCEESQISFKSNVHDTTNSFVDQKSSWYSLPSHNPPSQQDNCMFTFSNKD 380
            GHQNA  +++  +KK    +  KASIN+YLQP Q NNH  SF  YHG+    WFYDPS  +       +ESQISF     D  +    Q S WY+ P+ N P QQD CMFT ++ +
Sbjct:  101 GHQNA-HKKERMKKKRLQLQARKASINHYLQPLQ-NNH--SF-TYHGSAL--WFYDPSCQSPD-----DESQISFTPFDQD-AHLKKSQFSKWYAPPA-NLPLQQDTCMFTLTHPE 202          

HSP 2 Score: 25.7942 bits (55), Expect = 2.582e-13
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2
Query:    2 KEFANSQALGG 34
            KEFANSQALGG
Sbjct:   91 KEFANSQALGG 101          
BLAST of Cicer_arietinum_v1_Contig73 vs. TrEMBL
Match: B9HLW3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_565231 PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.505e-13
Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 3
Query:   33 GHQNAPQERKNEEKKDCNFKLEKASINYYLQPFQTNNHHGSFANY-HGNDTHNWFYDPSSYNNSEFSL-CEESQISFKSNVHDTTNSFVDQKSSWYSLPSHNPPSQQ-DNCMFTFSNKDDRPFIFKPS----SNQIHTKGLDLQLGLNLKSS 467
            GHQNA  +++  +K+   F+  KAS+  YLQP+Q N  +    NY +G+    WF+DPS     E +L  +ESQISF     D ++    Q S W ++P+   P QQ     FTFS+ D R    KPS    S +   K LDLQLGL+  +S
Sbjct:  104 GHQNA-HKKERMKKRLLQFQARKASLGGYLQPYQDNLSN----NYQYGSTCTPWFFDPSCSTTPELTLHDQESQISFNPYQED-SHLNDSQISKWDAVPADQVPFQQHTRNNFTFSHADQRS-RDKPSPLLASKKACRKSLDLQLGLSTGNS 248          

HSP 2 Score: 25.7942 bits (55), Expect = 9.505e-13
Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 2
Query:    2 KEFANSQALGG 34
            KEFANSQALGG
Sbjct:   94 KEFANSQALGG 104          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig73 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 6
Match NameE-valueIdentityDescription
C6T305_SOYBN3.019e-3459.09Putative uncharacterized protein OS=Glycine max PE... [more]
B9S2J5_RICCO5.175e-1940.94Putative uncharacterized protein OS=Ricinus commun... [more]
D7TNK9_VITVI1.919e-1843.67Whole genome shotgun sequence of line PN40024, sca... [more]
B9HMT4_POPTR2.650e-1739.33Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5B5F1_VITVI2.582e-1344.83Putative uncharacterized protein OS=Vitis vinifera... [more]
B9HLW3_POPTR9.505e-1338.82Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
back to top
Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig73 ID=Cicer_arietinum_v1_Contig73; Name=Cicer_arietinum_v1_Contig73; organism=Cicer arietinum; type=contig; length=740bp
CAAAGAATTTGCAAACTCACAAGCATTAGGAGGGTCATCAAAATGCACCA
CAAGAAAGAAAGAATGAAGAAAAAAAAGATTGCAACTTCAAGCTAGAAAA
AGCTAGTATAAACTATTACCTACAACCTTTTCAAACCAATAACCATCACG
GTAGTTTTGCCAATTACCATGGAAATGATACTCATAATTGGTTTTATGAC
CCTTCTTCTTATAATAACTCTGAATTCTCCTTGTGTGAAGAATCTCAAAT
TAGTTTCAAGTCAAATGTTCATGACACTACCAACTCTTTTGTTGATCAAA
AATCTAGTTGGTATTCTTTGCCTTCACATAATCCTCCTTCTCAACAAGAT
AATTGCATGTTTACTTTCTCCAATAAAGATGATAGGCCTTTCATCTTTAA
GCCTTCTTCAAACCAAATTCATACTAAAGGTTTAGATCTTCAACTAGGCC
TCAATTTGAAGTCAAGTACAAAAAGGACATAATTTTGCATACGACATATC
GTAAAAGTTTCATTTTTTCCTTGAATTGTTTGAATGTCTCAATTCTCAAT
CATCAAGGAAAGGGATATGAAAAGGAAAAAAATATCACTATTCGTTAGAA
TTGGTTTGTCTTGACCCAGCCGTTACAGAGCCAATTACTAAAGTATGACT
AATAATTGTTTACACAATTTATACGATTCTTACAGTGTATTTATTTTATA
TGATATATAGCAATTGGCAATTACATTCAATGTTTTACAT
back to top