Cicer_arietinum_v1_Contig738

Contig Overview
NameCicer_arietinum_v1_Contig738
Unique NameCicer_arietinum_v1_Contig738
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length303
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR393670ESTGR393670:28..275 +
HO065760ESTHO065760:22..286 +
FD449555ESTFD449555:43..282 -
GR917584ESTGR917584:1..300 +
GR912921ESTGR912921:1..303 +
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR393670GR393670Cicer arietinumEST
HO065760HO065760Cicer arietinumEST
FD449555FD449555Cicer arietinumEST
GR917584GR917584Cicer arietinumEST
GR912921GR912921Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_ARATH (60S ribosomal protein L23 OS=Arabidopsis thaliana GN=RPL23A PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.885e-18
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_TOBAC (60S ribosomal protein L23 OS=Nicotiana tabacum GN=RPL23 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.443e-17
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVN KGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNAKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_TORRU (60S ribosomal protein L23 OS=Tortula ruralis GN=RPL23 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.282e-17
Identity = 40/42 (95.24%), Postives = 40/42 (95.24%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEM  SAITGPIGKECADLWPRIASAANA
Sbjct:   96 YFEDNAGVIVNPKGEMNPSAITGPIGKECADLWPRIASAANA 137
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.026e-15
Identity = 40/50 (80.00%), Postives = 41/50 (82.00%), Query Frame = -3 
Query:  164 AWSRPR----YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAA 301
            AW R      YFEDNAGVIVNPKGEMKGSAITGP+ KECADLWPRIAS A
Sbjct:   86 AWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNA 135
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.750e-15
Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = -3 
Query:  170 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIAS 283
            YFEDNAGVI NPKGEMKGSAITGP+GKECADLWPR+AS
Sbjct:   94 YFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVAS 131
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_DROME (60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.687e-15
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A++
Sbjct:   97 YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASS 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_RAT (60S ribosomal protein L23 OS=Rattus norvegicus GN=Rpl23 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.135e-14
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +
Sbjct:   97 YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGS 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_PONAB (60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.135e-14
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +
Sbjct:   97 YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGS 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_PIG (60S ribosomal protein L23 OS=Sus scrofa GN=RPL23 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.135e-14
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +
Sbjct:   97 YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGS 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Match: RL23_MOUSE (60S ribosomal protein L23 OS=Mus musculus GN=Rpl23 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.135e-14
Identity = 36/42 (85.71%), Postives = 38/42 (90.48%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +
Sbjct:   97 YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGS 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: Q9SMC5_SOLLC (Ribosomal protein L17 (Fragment) OS=Solanum lycopersicum GN=l17 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   17 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 58
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: Q9AV77_ORYSJ (60S ribosomal protein L17 OS=Oryza sativa subsp. japonica GN=OSJNBa0006L06.7 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: Q9ATF6_CASSA (Ribosomal protein L17 OS=Castanea sativa PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: Q7X9K1_WHEAT (Ribosomal Pr 117 (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:  104 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 145
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: Q5I7K4_WHEAT (Ribosomal protein L17 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: Q3HRY2_SOLTU (Ribosomal protein L17-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: Q1H559_ARATH (At2g33370 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: O65068_PICMA (60S ribosomal protein L17 (Fragment) OS=Picea mariana GN=Sb38 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   90 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 131
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: O22686_ARATH (F19P19.5 protein OS=Arabidopsis thaliana GN=F19P19.5 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:  114 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 155
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Match: D7KDF3_ARALY (60S ribosomal protein L23 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_470426 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.970e-17
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TAIR peptide
Match: AT3G04400.2 (| Symbols: emb2171 | Ribosomal protein L14p/L23e family protein | chr3:1167611-1168308 FORWARD LENGTH=125)

HSP 1 Score: 90.5077 bits (223), Expect = 2.274e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   82 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 123
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TAIR peptide
Match: AT3G04400.1 (| Symbols: emb2171 | Ribosomal protein L14p/L23e family protein | chr3:1167339-1168308 FORWARD LENGTH=140)

HSP 1 Score: 90.5077 bits (223), Expect = 2.274e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TAIR peptide
Match: AT2G33370.1 (| Symbols: | Ribosomal protein L14p/L23e family protein | chr2:14143718-14144644 REVERSE LENGTH=140)

HSP 1 Score: 90.5077 bits (223), Expect = 2.274e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
[Close]
BLAST of Cicer_arietinum_v1_Contig738 vs. TAIR peptide
Match: AT1G04480.1 (| Symbols: | Ribosomal protein L14p/L23e family protein | chr1:1216110-1217257 FORWARD LENGTH=140)

HSP 1 Score: 90.5077 bits (223), Expect = 2.274e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = -3 
Query:  158 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 283
            YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA
Sbjct:   97 YFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANA 138
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig738 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RL23_ARATH2.885e-18100.0060S ribosomal protein L23 OS=Arabidopsis thaliana ... [more]
RL23_TOBAC2.443e-1797.6260S ribosomal protein L23 OS=Nicotiana tabacum GN=... [more]
RL23_TORRU9.282e-1795.2460S ribosomal protein L23 OS=Tortula ruralis GN=RP... [more]
RL23_SCHPO1.026e-1580.0060S ribosomal protein L23 OS=Schizosaccharomyces p... [more]
RL23_YEAST1.750e-1592.1160S ribosomal protein L23 OS=Saccharomyces cerevis... [more]
RL23_DROME8.687e-1585.7160S ribosomal protein L23 OS=Drosophila melanogast... [more]
RL23_RAT1.135e-1485.7160S ribosomal protein L23 OS=Rattus norvegicus GN=... [more]
RL23_PONAB1.135e-1485.7160S ribosomal protein L23 OS=Pongo abelii GN=RPL23... [more]
RL23_PIG1.135e-1485.7160S ribosomal protein L23 OS=Sus scrofa GN=RPL23 P... [more]
RL23_MOUSE1.135e-1485.7160S ribosomal protein L23 OS=Mus musculus GN=Rpl23... [more]
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BLAST of Cicer_arietinum_v1_Contig738 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
Q9SMC5_SOLLC5.970e-17100.00Ribosomal protein L17 (Fragment) OS=Solanum lycope... [more]
Q9AV77_ORYSJ5.970e-17100.0060S ribosomal protein L17 OS=Oryza sativa subsp. j... [more]
Q9ATF6_CASSA5.970e-17100.00Ribosomal protein L17 OS=Castanea sativa PE=2 SV=1[more]
Q7X9K1_WHEAT5.970e-17100.00Ribosomal Pr 117 (Fragment) OS=Triticum aestivum P... [more]
Q5I7K4_WHEAT5.970e-17100.00Ribosomal protein L17 OS=Triticum aestivum PE=2 SV... [more]
Q3HRY2_SOLTU5.970e-17100.00Ribosomal protein L17-like protein OS=Solanum tube... [more]
Q1H559_ARATH5.970e-17100.00At2g33370 OS=Arabidopsis thaliana PE=2 SV=1[more]
O65068_PICMA5.970e-17100.0060S ribosomal protein L17 (Fragment) OS=Picea mari... [more]
O22686_ARATH5.970e-17100.00F19P19.5 protein OS=Arabidopsis thaliana GN=F19P19... [more]
D7KDF3_ARALY5.970e-17100.0060S ribosomal protein L23 OS=Arabidopsis lyrata su... [more]
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BLAST of Cicer_arietinum_v1_Contig738 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT3G04400.22.274e-19100.00| Symbols: emb2171 | Ribosomal protein L14p/L23e f... [more]
AT3G04400.12.274e-19100.00| Symbols: emb2171 | Ribosomal protein L14p/L23e f... [more]
AT2G33370.12.274e-19100.00| Symbols: | Ribosomal protein L14p/L23e family p... [more]
AT1G04480.12.274e-19100.00| Symbols: | Ribosomal protein L14p/L23e family p... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14b/L23eGENE3D2.40.150.20no descriptioncoord: 7..50
score: 3.5
IPR000218Ribosomal protein L14b/L23ePANTHERPTHR1176150S/60S RIBOSOMAL PROTEIN L14/L23coord: 7..50
score: 2.2
IPR000218Ribosomal protein L14b/L23ePFAMPF00238Ribosomal_L14coord: 7..50
score: 1.3
IPR000218Ribosomal protein L14b/L23eSUPERFAMILY50193Ribosomal protein L14coord: 7..50
score: 2.1
NoneNo IPR availablePANTHERPTHR11761:SF460S RIBOSOMAL PROTEIN L23coord: 7..50
score: 2.2

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig738 ID=Cicer_arietinum_v1_Contig738; Name=Cicer_arietinum_v1_Contig738; organism=Cicer arietinum; type=contig; length=303bp
CTTCGAGCGGCCGCCCGGGCAGGTACAGAGAAGTTACGAACTTTTAAGCT
ATCCTCTTGTCACTTTCAATAAAGATTCAACATAAAACAATACCAAGGGC
AGCATAAAATACCAGAAACAAAATCCTTATAAATACTAAAAAACCAACTT
AAACGATAGCATTAGCAGCACTTGCAATCCTAGGCCACAAATCAGCACAC
TCCTTTCCAATTGGACCAGTGATAGCAGAACCTTTCATTTCTCCTTTAGG
ATTCACAATGACACCAGCATTATCTTCAAAGTACCTCGGCCGCGACCACG
CTA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR000218Ribosomal_uL14