Cicer_arietinum_v1_Contig748

Contig Overview
NameCicer_arietinum_v1_Contig748
Unique NameCicer_arietinum_v1_Contig748
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length504
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR912815ESTGR912815:1..217 +
GR915033ESTGR915033:1..321 +
HO067244ESTHO067244:85..484 +
GR408692ESTGR408692:351..483 -
GR408159ESTGR408159:354..504 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR912815GR912815Cicer arietinumEST
GR915033GR915033Cicer arietinumEST
HO067244HO067244Cicer arietinumEST
GR408692GR408692Cicer arietinumEST
GR408159GR408159Cicer arietinumEST


Homology
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BLAST of Cicer_arietinum_v1_Contig748 vs. TrEMBL
Match: C6T187_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.607e-14
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 3 
Query:   36 SRESLIAISNTSPDKILDSNSVSESKKSDGGVLPNCDQDEQFRSELISISYSESPDVKI 212
            +RESLIAISN+ PDK L+S S  ESKKSDG  + N DQD++FRSELISISY+ESPD KI
Sbjct:   14 TRESLIAISNSLPDKTLESKSALESKKSDGVAMQNRDQDDKFRSELISISYAESPDEKI 72
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig748 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
C6T187_SOYBN1.607e-1471.19Putative uncharacterized protein OS=Glycine max PE... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 42..55
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig748 ID=Cicer_arietinum_v1_Contig748; Name=Cicer_arietinum_v1_Contig748; organism=Cicer arietinum; type=contig; length=504bp
GATTAGCGTGGTCGCGGCCGAGGTTGATCAGGTGGTCACGCGAGTCGCTT
ATTGCTATTTCCAACACTTCACCAGATAAGATTCTGGATTCAAATTCTGT
GTCCGAGAGCAAGAAATCAGATGGGGGTGTGTTGCCAAACTGTGATCAGG
ATGAACAGTTTAGGTCTGAACTGATTTCAATTTCATATTCTGAATCACCT
GATGTCAAGATTGGATCAATTTCAATGGGAGTGTAGGCTACAACTATAAT
TGTCCCTAGTAATTAATGTGTAACTCTTGGATTTTAATTTGGTTGAACTT
TGTCTATGTCAGTTTTGCGACTAAATTGGTTGTGTACTTTATCTGCTATC
TTGCAACCATATGTAAATACTTTCATAGGCCACATGTTTGTGTCGAATGT
TGCAATGACTGTGATAACTGTGTTGTTTCAGCAGTACTGTGTTAGTTCAT
GTGAGATACTGAAAATAAAAGTAAAACTTGTACCATGTTTTCATATGTTA
AAAA
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