Cicer_arietinum_v1_Contig757

Contig Overview


Name	Cicer_arietinum_v1_Contig757
Unique Name	Cicer_arietinum_v1_Contig757
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	547

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
GR914097	EST	GR914097:1..374 +	Cicer arietinum unigene v1	n/a
GR916022	EST	GR916022:1..464 +	Cicer arietinum unigene v1	n/a
GR402910	EST	GR402910:215..547 -	Cicer arietinum unigene v1	n/a

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
GR914097	GR914097	Cicer arietinum	EST
GR916022	GR916022	Cicer arietinum	EST
GR402910	GR402910	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: C6THR3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.329e-18
Identity = 58/119 (48.74%), Postives = 65/119 (54.62%), Query Frame = 1

Query:   22 QVPQFTPSTVNPASHFPSTDTQXXXXXXXXXXXXXVNKVVDXXXXXXXXXXXXXXXXXAVXXXXXXEKPSGVVGDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYG 378
            QVPQF PST   AS     ++              VNK V                            P+GV  DPLGDARNKVQDEI+KEFA+IMASGTMRASEAAALAT+RVM+RYG
Sbjct:  159 QVPQFRPSTTLNASANTQKNSSISNSSTENVVSREVNKEVKGKDEKAASPSAKPAGEPQ------KSSPNGVTADPLGDARNKVQDEILKEFAAIMASGTMRASEAAALATKRVMQRYG 271

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: D7U3J9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00028648001 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.575e-14
Identity = 44/68 (64.71%), Postives = 54/68 (79.41%), Query Frame = 1

Query:  196 AVXXXXXXEKPSGVVGDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQIAVSHS 399
            AV      EKP+  V DPLGDAR+KVQ+EI  EFA+IMA+GT+RASEAAALAT+RVM+RYG + V+ S
Sbjct:  189 AVKPAVVKEKPA--VSDPLGDARSKVQEEISTEFAAIMATGTLRASEAAALATKRVMQRYGHMNVATS 254

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: B9GNJ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816898 PE=4 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.358e-13
Identity = 38/48 (79.17%), Postives = 45/48 (93.75%), Query Frame = 1

Query:  241 GDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQI 384
            GDPLGDARNKVQ+EI +EFA+IMA+GT RASEAAALAT+RVM+RYG +
Sbjct:  230 GDPLGDARNKVQEEIGREFAAIMATGTFRASEAAALATKRVMQRYGHL 277

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: Q6K3E0_ORYSJ (Os02g0814000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0053L11.37 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.502e-12
Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 1

Query:  232 GVVGDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQIAVSHS 399
            G   DPLG AR KVQ+E+++EFA+IMASGT+RASEAAALA RRVMER+G   +  S
Sbjct:  197 GSAADPLGGARGKVQEEVMREFAAIMASGTLRASEAAALAMRRVMERHGNATMQQS 252

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: A2XAY0_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09412 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.502e-12
Identity = 37/56 (66.07%), Postives = 45/56 (80.36%), Query Frame = 1

Query:  232 GVVGDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQIAVSHS 399
            G   DPLG AR KVQ+E+++EFA+IMASGT+RASEAAALA RRVMER+G   +  S
Sbjct:  767 GSAADPLGGARGKVQEEVMREFAAIMASGTLRASEAAALAMRRVMERHGDATMQQS 822

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: D7L631_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_671532 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.370e-12
Identity = 34/50 (68.00%), Postives = 45/50 (90.00%), Query Frame = 1

Query:  244 DPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQIAVS 393
            DPLGDAR K+Q+EI  EFA++MA GT+RASEAAA+AT+RVM++YGQ+ V+
Sbjct:  215 DPLGDARAKIQEEITTEFAALMAQGTLRASEAAAMATKRVMQKYGQLNVN 264

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: B6TIJ3_MAIZE (Thioredoxin OS=Zea mays PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.370e-12
Identity = 36/45 (80.00%), Postives = 42/45 (93.33%), Query Frame = 1

Query:  244 DPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYG 378
            DPLG AR KVQ+E++KEFA+IMASGT+RASEAAALA RRVMER+G
Sbjct:  210 DPLGSARGKVQEEVMKEFAAIMASGTLRASEAAALAMRRVMERHG 254

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: Q9SFT9_ARATH (Putative uncharacterized protein At3g07090 OS=Arabidopsis thaliana GN=At3g07090 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.734e-12
Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 1

Query:  235 VVGDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQIAVS 393
            V  DPLGDAR K+Q+EI  EFA++MA GT+RASEAAA+AT+RVM++YG + V+
Sbjct:  212 VKDDPLGDARAKIQEEITSEFAALMAQGTLRASEAAAMATKRVMQKYGHLNVN 264

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: C5XVT5_SORBI (Putative uncharacterized protein Sb04g036920 OS=Sorghum bicolor GN=Sb04g036920 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.734e-12
Identity = 35/45 (77.78%), Postives = 42/45 (93.33%), Query Frame = 1

Query:  244 DPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYG 378
            DPLG AR KVQ+E+++EFA+IMASGT+RASEAAALA RRVMER+G
Sbjct:  213 DPLGSARGKVQEEVMREFAAIMASGTLRASEAAALAMRRVMERHG 257

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Match: C0Z366_ARATH (AT3G07090 protein OS=Arabidopsis thaliana GN=AT3G07090 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.734e-12
Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 1

Query:  235 VVGDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQIAVS 393
            V  DPLGDAR K+Q+EI  EFA++MA GT+RASEAAA+AT+RVM++YG + V+
Sbjct:  129 VKDDPLGDARAKIQEEITSEFAALMAQGTLRASEAAAMATKRVMQKYGHLNVN 181

[Close]

BLAST of Cicer_arietinum_v1_Contig757 vs. TAIR peptide
Match: AT3G07090.1 (| Symbols: | PPPDE putative thiol peptidase family protein | chr3:2243153-2244476 REVERSE LENGTH=265)

HSP 1 Score: 73.559 bits (179), Expect = 7.840e-14
Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 1

Query:  235 VVGDPLGDARNKVQDEIIKEFASIMASGTMRASEAAALATRRVMERYGQIAVS 393
            V  DPLGDAR K+Q+EI  EFA++MA GT+RASEAAA+AT+RVM++YG + V+
Sbjct:  212 VKDDPLGDARAKIQEEITSEFAALMAQGTLRASEAAAMATKRVMQKYGHLNVN 264

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig757 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig757 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
C6THR3_SOYBN	5.329e-18	48.74	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7U3J9_VITVI	3.575e-14	64.71	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9GNJ9_POPTR	1.358e-13	79.17	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q6K3E0_ORYSJ	1.502e-12	66.07	Os02g0814000 protein OS=Oryza sativa subsp. japoni...	[more]
A2XAY0_ORYSI	1.502e-12	66.07	Putative uncharacterized protein OS=Oryza sativa s...	[more]
D7L631_ARALY	4.370e-12	68.00	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
B6TIJ3_MAIZE	4.370e-12	80.00	Thioredoxin OS=Zea mays PE=2 SV=1	[more]
Q9SFT9_ARATH	9.734e-12	64.15	Putative uncharacterized protein At3g07090 OS=Arab...	[more]
C5XVT5_SORBI	9.734e-12	77.78	Putative uncharacterized protein Sb04g036920 OS=So...	[more]
C0Z366_ARATH	9.734e-12	64.15	AT3G07090 protein OS=Arabidopsis thaliana GN=AT3G0...	[more]

BLAST of Cicer_arietinum_v1_Contig757 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G07090.1	7.840e-14	64.15	\| Symbols: \| PPPDE putative thiol peptidase famil...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 30..42 score: NAcoord: 49..65 score: NAcoord: 68..73 score
None	No IPR available	SEG	seg	seg	coord: 7..19 score
None	No IPR available	SEG	seg	seg	coord: 32..52 score
None	No IPR available	SEG	seg	seg	coord: 27..52 score

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig757 ID=Cicer_arietinum_v1_Contig757; Name=Cicer_arietinum_v1_Contig757; organism=Cicer arietinum; type=contig; length=547bp
GATTTCGAGCGGCCGCCCGGGCAGGTACCACAATTCACGCCTTCAACAGT
GAATCCAGCTTCACACTTTCCCTCAACCGACACACAGAAGAGTTCAAGTG
GAACTAACTCGTCTACTGAGAAAAGTGTGAACAAAGTGGTGGATAATAGT
AACAAGGAAGTAAAAGGCAAAGAAGAGAATAAGAAGACAGAAAATGCAGT
GTCATCATCATCATCTTCTGAAAAGCCAAGTGGTGTTGTAGGCGATCCTC
TAGGGGATGCACGCAACAAGGTTCAAGATGAGATTATTAAAGAGTTTGCT
TCAATAATGGCAAGTGGAACAATGCGTGCTAGTGAGGCTGCAGCACTTGC
TACTAGAAGAGTTATGGAAAGATATGGCCAAATTGCTGTGTCACACAGTT
AGCTGCAACACTTGTTTTTTTCATAATTATAATTTTAACTATTTAATGTT
GCTCAAAGTGTTTGTGGTGGATTATTAGTAATCATTATTTGAGACACAAT
ATAATGTGCCTGCATTTTGTTATTTTGGTCCTAAAAGTTTATTTTAC

Search form

Cicer_arietinum_v1_Contig757