Cicer_arietinum_v1_Contig767

Contig Overview
NameCicer_arietinum_v1_Contig767
Unique NameCicer_arietinum_v1_Contig767
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length405
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR917294ESTGR917294:3..279 +Cicer arietinum unigene v1n/a
GR916416ESTGR916416:2..292 +Cicer arietinum unigene v1n/a
GR915904ESTGR915904:1..405 +Cicer arietinum unigene v1n/a
GR916087ESTGR916087:3..386 +Cicer arietinum unigene v1n/a
ES560252ESTES560252:27..384 +Cicer arietinum unigene v1n/a
GR915557ESTGR915557:2..405 +Cicer arietinum unigene v1n/a
GR915950ESTGR915950:17..405 -Cicer arietinum unigene v1n/a
GR912479ESTGR912479:1..405 +Cicer arietinum unigene v1n/a
GR916359ESTGR916359:56..405 -Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR917294GR917294Cicer arietinumEST
GR916416GR916416Cicer arietinumEST
GR915904GR915904Cicer arietinumEST
GR916087GR916087Cicer arietinumEST
ES560252ES560252Cicer arietinumEST
GR915557GR915557Cicer arietinumEST
GR915950GR915950Cicer arietinumEST
GR912479GR912479Cicer arietinumEST
GR916359GR916359Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: B9SXE3_RICCO (3-isopropylmalate dehydratase, putative OS=Ricinus communis GN=RCOM_1389110 PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.153e-20
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPTR 185
            R      TGDVVT+EL ENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYAR TGMIP++
Sbjct:  193 RICEECKTGDVVTIELAENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARSTGMIPSQ 252
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: A9PJA7_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.175e-19
Identity = 45/60 (75.00%), Postives = 53/60 (88.33%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPTR 185
            R      TGD++T+EL E++LINHT+GKEYKLKPIGDAGPVIEAGGIFAYARKTGMIP++
Sbjct:  194 RICEECKTGDLITIELAESKLINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPSQ 253
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: B5LAV2_CAPAN (Putative 3-isopropylmalate dehydrogenase small subunit OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.710e-19
Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI 176
            R      TGDVVTVE  E+RLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI
Sbjct:  194 RICEECKTGDVVTVEFGESRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI 250
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: A5B9M3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034682 PE=4 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.329e-19
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPTR 185
            R      TGDVVT+EL E++LINHTTGKEYKL P+GD GPVIEAGGIFAYARKTGMIP +
Sbjct:  192 RICEECRTGDVVTIELGESKLINHTTGKEYKLNPVGDVGPVIEAGGIFAYARKTGMIPAQ 251
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: C0PQ56_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.036e-17
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI 176
            R      TGD+VTVE+E N+LINHTTGKEY LKPIGDAGPVI+AGGIF YAR+TGMI
Sbjct:  204 RVCDECKTGDIVTVEIEGNKLINHTTGKEYVLKPIGDAGPVIDAGGIFEYARRTGMI 260
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: A9NMS1_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.036e-17
Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMI 176
            R      TGD+VTVE+E N+LINHTTGKEY LKPIGDAGPVI+AGGIF YAR+TGMI
Sbjct:  230 RVCDECKTGDIVTVEIEGNKLINHTTGKEYVLKPIGDAGPVIDAGGIFEYARRTGMI 286
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: Q949D1_ORYSA (Putative uncharacterized protein C740ERIPDM OS=Oryza sativa GN=C740ERIPDM PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.473e-17
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 3 
Query:   27 TGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPTR 185
            TGDVVTVEL+   +INHT+GK+YKLKPIGDAGPVIEAGGIFAYARKTGMI ++
Sbjct:  203 TGDVVTVELDNCVMINHTSGKQYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 255
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: Q6URQ0_ORYSJ (3-isopropylmalate dehydratase small subunit OS=Oryza sativa subsp. japonica GN=IPMDHSU PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.473e-17
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 3 
Query:   27 TGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPTR 185
            TGDVVTVEL+   +INHT+GK+YKLKPIGDAGPVIEAGGIFAYARKTGMI ++
Sbjct:  203 TGDVVTVELDNCVMINHTSGKQYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 255
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: Q6H6I1_ORYSJ (3-isopropylmalate dehydratase, small subunit-like OS=Oryza sativa subsp. japonica GN=P0519E06.10 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.473e-17
Identity = 43/53 (81.13%), Postives = 49/53 (92.45%), Query Frame = 3 
Query:   27 TGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPTR 185
            TGDVVTVEL+   +INHT+GK+YKLKPIGDAGPVIEAGGIFAYARKTGMI ++
Sbjct:  203 TGDVVTVELDNCVMINHTSGKQYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 255
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Match: C5XRZ8_SORBI (Putative uncharacterized protein Sb04g033080 OS=Sorghum bicolor GN=Sb04g033080 PE=4 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.473e-17
Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 3 
Query:   27 TGDVVTVELEENRLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPTR 185
            TGDVVTV+L  +  INHT+GKEYKLKPIGDAGPVIEAGGIFAYARKTGMI ++
Sbjct:  195 TGDVVTVDLSNSVFINHTSGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIASK 247
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TAIR peptide
Match: AT2G43090.2 (| Symbols: | Aconitase/3-isopropylmalate dehydratase protein | chr2:17918957-17919712 FORWARD LENGTH=222)

HSP 1 Score: 90.5077 bits (223), Expect = 3.220e-19
Identity = 46/61 (75.41%), Postives = 48/61 (78.69%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENR--LINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPT 182
            R      TGDV TVEL E    LINHTTGKEYKLKPIGDAGPVI+AGGIFAYARK GMIP+
Sbjct:  159 RVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPS 219
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TAIR peptide
Match: AT2G43090.1 (| Symbols: | Aconitase/3-isopropylmalate dehydratase protein | chr2:17918957-17919712 FORWARD LENGTH=251)

HSP 1 Score: 90.5077 bits (223), Expect = 3.220e-19
Identity = 46/61 (75.41%), Postives = 48/61 (78.69%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENR--LINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPT 182
            R      TGDV TVEL E    LINHTTGKEYKLKPIGDAGPVI+AGGIFAYARK GMIP+
Sbjct:  188 RVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPS 248
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TAIR peptide
Match: AT3G58990.1 (| Symbols: IPMI1 | isopropylmalate isomerase 1 | chr3:21797524-21798285 REVERSE LENGTH=253)

HSP 1 Score: 85.1149 bits (209), Expect = 1.353e-17
Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 3 
Query:   27 TGDVVTVELEENR---LINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPT 182
            TGDVVT+E +E+    LINHTT KEYKLKP+GDAGPVI+AGGIFAYARK GMIP+
Sbjct:  198 TGDVVTIEHKEDGSSLLINHTTRKEYKLKPLGDAGPVIDAGGIFAYARKAGMIPS 252
[Close]
BLAST of Cicer_arietinum_v1_Contig767 vs. TAIR peptide
Match: AT2G43100.1 (| Symbols: IPMI2, ATLEUD1 | isopropylmalate isomerase 2 | chr2:17920685-17921455 FORWARD LENGTH=256)

HSP 1 Score: 80.1073 bits (196), Expect = 4.351e-16
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 3 
Query:    6 RAAARAGTGDVVTVELEENR--LINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKTGMIPT 182
            R      TGD VT+EL ++   L NHTTGK YKLK IGDAGPVI+AGGIFAYAR  GMIP+
Sbjct:  194 RVCEECKTGDTVTIELSDSGGLLTNHTTGKNYKLKSIGDAGPVIDAGGIFAYARMMGMIPS 254
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig767 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9SXE3_RICCO1.153e-2081.673-isopropylmalate dehydratase, putative OS=Ricinus... [more]
A9PJA7_9ROSI2.175e-1975.00Putative uncharacterized protein OS=Populus tricho... [more]
B5LAV2_CAPAN3.710e-1984.21Putative 3-isopropylmalate dehydrogenase small sub... [more]
A5B9M3_VITVI6.329e-1975.00Putative uncharacterized protein OS=Vitis vinifera... [more]
C0PQ56_PICSI2.036e-1775.44Putative uncharacterized protein OS=Picea sitchens... [more]
A9NMS1_PICSI2.036e-1775.44Putative uncharacterized protein OS=Picea sitchens... [more]
Q949D1_ORYSA3.473e-1781.13Putative uncharacterized protein C740ERIPDM OS=Ory... [more]
Q6URQ0_ORYSJ3.473e-1781.133-isopropylmalate dehydratase small subunit OS=Ory... [more]
Q6H6I1_ORYSJ3.473e-1781.133-isopropylmalate dehydratase, small subunit-like ... [more]
C5XRZ8_SORBI3.473e-1781.13Putative uncharacterized protein Sb04g033080 OS=So... [more]
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BLAST of Cicer_arietinum_v1_Contig767 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT2G43090.23.220e-1975.41| Symbols: | Aconitase/3-isopropylmalate dehydrat... [more]
AT2G43090.13.220e-1975.41| Symbols: | Aconitase/3-isopropylmalate dehydrat... [more]
AT3G58990.11.353e-1776.36| Symbols: IPMI1 | isopropylmalate isomerase 1 | c... [more]
AT2G43100.14.351e-1665.57| Symbols: IPMI2, ATLEUD1 | isopropylmalate isomer... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0123053-isopropylmalate dehydratase, small subunit-likePANTHERPTHR11670:SF23-ISOPROPYLMALATE DEHYDRATASEcoord: 9..53
score: 9.3
IPR015937Aconitase/isopropylmalate dehydratasePANTHERPTHR11670ACONITASEcoord: 9..53
score: 9.3

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig767 ID=Cicer_arietinum_v1_Contig767; Name=Cicer_arietinum_v1_Contig767; organism=Cicer arietinum; type=contig; length=405bp
GATTTCGAGCGGCCGCCCGGGCAGGTACGGGAGATGTAGTGACGGTTGAG
CTCGAGGAGAATCGATTGATCAATCACACAACCGGAAAGGAGTATAAGTT
GAAGCCTATTGGAGATGCCGGTCCTGTCATTGAAGCCGGTGGTATCTTTG
CCTATGCTAGGAAAACCGGCATGATTCCTACTCGATGAGAGAAAGTCATG
TTGGCAGCAGCAGATGTTTTGGGAGGCTGACTAGAATTGTTTGTTCGCCT
GCATTCAAGGATTCTATTCAGATTCTCTAATCATGCAGCTTTTATAAAAA
TGAGTATTGTAATTTGGAGTTAGAATTGTTAACTATTTTAGGAATATAAA
ATGTCAAGGCTTTCTATTAGAACATTTGAAAGGTACCTCGGCCGCGACCA
CGCTA
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: Molecular Function
TermDefinition
GO:00038613-isopropylmalate dehydratase activity
Vocabulary: Biological Process
TermDefinition
GO:0009098leucine biosynthetic process
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:00093163-isopropylmalate dehydratase complex
Vocabulary: INTERPRO
TermDefinition
IPR0123053-isopropylmalate dehydratase, small subunit-like
IPR015937Acoase/IPM_deHydtase