Cicer_arietinum_v1_Contig877

Contig Overview
NameCicer_arietinum_v1_Contig877
Unique NameCicer_arietinum_v1_Contig877
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length661
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
GR913004ESTGR913004:1..489 +
HO067385ESTHO067385:24..526 +
GR392354ESTGR392354:75..662 -
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR913004GR913004Cicer arietinumEST
HO067385HO067385Cicer arietinumEST
GR392354GR392354Cicer arietinumEST


Homology
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: B9GLP3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_814792 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.214e-16
Identity = 51/116 (43.97%), Postives = 74/116 (63.79%), Query Frame = 3
Query:   24 RYLFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKTVH-----NTDDDRKVDASNN-STRCETKMVD-LESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLF 350
            +YL  DSQ+M ASDE  V+S VNSL CLLQKDP+T  D         + D DR+++ +N+ ++ C++K ++   + +      S  +Q   +SRK+S GELL+NLP IAS+P FLF
Sbjct:  393 QYLLGDSQVMSASDEQSVVSTVNSLCCLLQKDPATARDLQAKSLSDLDVDHDRRINETNSTASACQSKFIESFPAPEGEASNVSICKQAPAMSRKDSVGELLLNLPSIASLPQFLF 508          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: B9SQX8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1405850 PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.026e-16
Identity = 50/124 (40.32%), Postives = 78/124 (62.90%), Query Frame = 3
Query:   24 RYLFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKT------VHNTDDDRKVDASNN--STRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSEDSG 371
            +YL +D+QL  +SDE  +M+RVNSL CLLQKDP+++++        V  +D+ + V  +N   S         ++  +      SG++Q  G+SRK+S G+LL++LPRIAS+P FLF +SE+ G
Sbjct:  432 QYLLSDNQLTTSSDEKRLMARVNSLCCLLQKDPASSQNSQANEEIYVGESDNGKGVQLNNTYESLNENKNKGGIKDPELNTKDVSGSKQVPGMSRKDSFGDLLLHLPRIASLPKFLFNISEEDG 555          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: B9RGP4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1442490 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.663e-15
Identity = 51/117 (43.59%), Postives = 69/117 (58.97%), Query Frame = 3
Query:   24 RYLFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKTVHNT------DDDRKVDA-SNNSTRCETKMVD-LESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLF 350
            +YL +D QL  ASDE  +MSRVNSL CLLQKDP +  +    ++       D RK +A SN    C++K  D     +      S  +Q   +SRK+S G+LL+NLPRIAS+P FL+
Sbjct:  399 QYLLSDYQLTSASDEQSLMSRVNSLCCLLQKDPGSARNLQARSSIDLEIDGDGRKGEAISNTMAACQSKAADGFPLPEDQLDNVSSCKQAPAMSRKDSIGDLLLNLPRIASLPQFLY 515          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: B9HBE8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_416401 PE=4 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.532e-14
Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 3
Query:   30 LFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKTVHNTDDDRKVDASNNST----RCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSED 365
            L +D+Q   +SDE  +M+RVNSL CLLQKDP++T++  V+    +   + SNN       C   + D+          SG++Q +G+SRK+S G+LL++LPRIAS+P  LF +SE+
Sbjct:  405 LLSDTQQTTSSDEKRIMARVNSLCCLLQKDPASTQNLEVNG---ESFFEESNNGKGLQLNCTNDIKDV----------SGSKQALGMSRKDSFGDLLLHLPRIASLPKLLFNISEE 507          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: B9GVV4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_830969 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.621e-14
Identity = 48/109 (44.04%), Postives = 61/109 (55.96%), Query Frame = 3
Query:   24 RYLFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKTVHNTDDDRKVDASNNSTRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLF 350
            +YL  DSQ+  ASDE  +M+RVNSL CLLQKDP T  D      D+   +D  +     ET                 N Q   ++RK+S GEL++NLPRIAS+PHFLF
Sbjct:  377 QYLLGDSQVTSASDEQSLMTRVNSLCCLLQKDPGTAWDLQGKRRDN---LDMDHGGRVDET-----------------NSQAPAMTRKDSVGELMLNLPRIASLPHFLF 465          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: B9IMA1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_737941 PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.641e-13
Identity = 49/123 (39.84%), Postives = 74/123 (60.16%), Query Frame = 3
Query:   24 RYLFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKTVH--------NTDDDRKVDASNNSTRCETKMVDLE-SEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSED 365
            +YL +D+Q   +SDE  +M+RVNSL CLLQKDP++T++   +        N      ++ +N S        D+  SE       SG++   G+SRK+S G+LL++LPRIAS+P FLF +SE+
Sbjct:  432 QYLLSDTQQTTSSDEKGIMARVNSLCCLLQKDPASTQNLQGNGESFFEEPNNGKGVLLNHTNESFHENKVRGDIRGSEGSSSKDISGSKPAPGMSRKDSFGDLLLHLPRIASLPKFLFNISEE 554          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: Q5SMV3_ORYSJ (Putative uncharacterized protein P0470C02.5-1 OS=Oryza sativa subsp. japonica GN=P0470C02.5-1 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.469e-11
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 3
Query:   24 RYLFADSQLMQAS--DEPYVMSRVNSLYCLLQKD-PSTTEDKTVHNTDDDRKVDASNNSTRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSEDS 368
            +YL  D+Q   AS  DE  +M+RV+SL CL+QKD P   + K   N  D    D +  S        +  S        +G  Q   +SRK+S G+LLMNLPRIAS+P FLF + EDS
Sbjct:  187 QYLLGDAQGPPASTSDERSLMARVDSLCCLIQKDTPPVAQPKPEPNDSDSIGGDGTEGSD-------EEFSSAASTVKTTGPAQPPAMSRKDSFGDLLMNLPRIASLPQFLFKIPEDS 297          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: Q0DDZ8_ORYSJ (Os06g0186600 protein OS=Oryza sativa subsp. japonica GN=Os06g0186600 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.469e-11
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 3
Query:   24 RYLFADSQLMQAS--DEPYVMSRVNSLYCLLQKD-PSTTEDKTVHNTDDDRKVDASNNSTRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSEDS 368
            +YL  D+Q   AS  DE  +M+RV+SL CL+QKD P   + K   N  D    D +  S        +  S        +G  Q   +SRK+S G+LLMNLPRIAS+P FLF + EDS
Sbjct:  360 QYLLGDAQGPPASTSDERSLMARVDSLCCLIQKDTPPVAQPKPEPNDSDSIGGDGTEGSD-------EEFSSAASTVKTTGPAQPPAMSRKDSFGDLLMNLPRIASLPQFLFKIPEDS 470          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: A3B936_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_20384 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.469e-11
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 3
Query:   24 RYLFADSQLMQAS--DEPYVMSRVNSLYCLLQKD-PSTTEDKTVHNTDDDRKVDASNNSTRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSEDS 368
            +YL  D+Q   AS  DE  +M+RV+SL CL+QKD P   + K   N  D    D +  S        +  S        +G  Q   +SRK+S G+LLMNLPRIAS+P FLF + EDS
Sbjct:  397 QYLLGDAQGPPASTSDERSLMARVDSLCCLIQKDTPPVAQPKPEPNDSDSIGGDGTEGSD-------EEFSSAASTVKTTGPAQPPAMSRKDSFGDLLMNLPRIASLPQFLFKIPEDS 507          
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Match: A2YA40_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21952 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.469e-11
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 3
Query:   24 RYLFADSQLMQAS--DEPYVMSRVNSLYCLLQKD-PSTTEDKTVHNTDDDRKVDASNNSTRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSEDS 368
            +YL  D+Q   AS  DE  +M+RV+SL CL+QKD P   + K   N  D    D +  S        +  S        +G  Q   +SRK+S G+LLMNLPRIAS+P FLF + EDS
Sbjct:  413 QYLLGDAQGPPASTSDERSLMARVDSLCCLIQKDTPPVAQPKPEPNDSDSIGGDGTEGSD-------EEFSSAASTVKTTGPAQPPAMSRKDSFGDLLMNLPRIASLPQFLFKIPEDS 523          
BLAST of Cicer_arietinum_v1_Contig877 vs. TAIR peptide
Match: AT4G30780.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | chr4:14990523-14992855 FORWARD LENGTH=589)

HSP 1 Score: 60.8474 bits (146), Expect = 7.304e-10
Identity = 38/121 (31.40%), Postives = 63/121 (52.07%), Query Frame = 3
Query:   30 LFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKTVHN-------TDDDRKVDASNNSTRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSEDSG 371
            L +D+   +A DE  +M RVNSL+ LL KDP+   +  ++        ++    V  +NN+     +++D  S  +            G+ RK+S  +LL++LPRI S+P FL  +SE+ G
Sbjct:  474 LLSDNIQFEAPDEKSLMPRVNSLFNLLYKDPNVAANSQLNTEMSVGLKSEPKGIVSDNNNNNNNNNRVLDTASSSKPQ----------GMLRKDSFSDLLLHLPRITSLPKFLSNISEEDG 584          
BLAST of Cicer_arietinum_v1_Contig877 vs. TAIR peptide
Match: AT2G24100.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr2:10244921-10246715 FORWARD LENGTH=466)

HSP 1 Score: 60.077 bits (144), Expect = 1.246e-9
Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 3
Query:   30 LFADSQLMQASDEPYVMSRVNSLYCLLQKDPSTTEDKTVHNTDDDRKVDASNNSTRCETKMVDLESEQRXXXXXSGNQQEIGLSRKESAGELLMNLPRIASMPHFLFPMSED 365
            L +D+     SDE  VMS+VNS   LLQ   +      +   D +R V   NN    E         +R     S ++   G+SRK+S  +LL++LPRI S+P FLF +SE+
Sbjct:  363 LLSDNTQTDPSDEKSVMSKVNSFCNLLQS--AANSQLNIETADTERVVGVDNNRHMPE-------GGKRVVDPASSSKPLQGMSRKDSFSDLLVHLPRITSLPKFLFNISEE 465          
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig877 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9GLP3_POPTR1.214e-1643.97Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SQX8_RICCO6.026e-1640.32Putative uncharacterized protein OS=Ricinus commun... [more]
B9RGP4_RICCO6.663e-1543.59Putative uncharacterized protein OS=Ricinus commun... [more]
B9HBE8_POPTR2.532e-1441.38Predicted protein (Fragment) OS=Populus trichocarp... [more]
B9GVV4_POPTR9.621e-1444.04Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9IMA1_POPTR1.641e-1339.84Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q5SMV3_ORYSJ4.469e-1141.53Putative uncharacterized protein P0470C02.5-1 OS=O... [more]
Q0DDZ8_ORYSJ4.469e-1141.53Os06g0186600 protein OS=Oryza sativa subsp. japoni... [more]
A3B936_ORYSJ4.469e-1141.53Putative uncharacterized protein OS=Oryza sativa s... [more]
A2YA40_ORYSI4.469e-1141.53Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of Cicer_arietinum_v1_Contig877 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G30780.17.304e-1031.40| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT2G24100.11.246e-935.71| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 16..30
score: NAcoord: 40..54
score
NoneNo IPR availableSEGsegsegcoord: 79..83
score
NoneNo IPR availableSEGsegsegcoord: 38..52
score
NoneNo IPR availableSEGsegsegcoord: 9..20
score

Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig877 ID=Cicer_arietinum_v1_Contig877; Name=Cicer_arietinum_v1_Contig877; organism=Cicer arietinum; type=contig; length=661bp
GATTTCGGAGCGGCCGCCCGGGCAGGTACTTGTTCGCCGACTCTCAACTT
ATGCAAGCTTCCGATGAACCCTACGTCATGTCAAGGGTTAACTCGTTATA
CTGCCTTCTTCAGAAAGACCCTTCAACCACCGAAGACAAAACTGTTCACA
ATACGGACGATGATAGAAAAGTTGACGCGAGTAATAACTCTACTCGATGC
GAAACTAAAATGGTTGATTTGGAAAGCGAACAACGTGATGATGACGATGA
CTCTGGTAATCAGCAAGAAATTGGCTTGTCTAGGAAGGAATCAGCTGGAG
AATTGCTTATGAATCTTCCAAGGATTGCTTCAATGCCACATTTTCTGTTT
CCTATGTCTGAAGATTCTGGTAGACAAGTTAGATAGTTATGATGTGATAA
AGGTTGAAACTTGAAAGAATCACAACAACAAAAAACTCTTTTTAAGTAGC
TTTTCTACAGTGTGAATATTTTTATGTGCATTCAGTTTCTTAAACTCAAA
TGGGATTTGGAAATTGTTATTGATGAAGAATCCCAACAACAAAAATATGT
GCATGGTGTGTTTGAGACAAATTTGTTGGCATCTCTTAAGGACATGTTTA
CTTCTATTGGTTACTGTTTTTCTTTTCATTGCAACTATAATACATACTAA
TGTTTTTTTGG
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