Cicer_arietinum_v1_Contig917

Contig Overview


Name	Cicer_arietinum_v1_Contig917
Unique Name	Cicer_arietinum_v1_Contig917
Type	contig
Organism	Cicer arietinum (chickpea)
Sequence length	439

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
FL512456	EST	FL512456:26..400 -
GR912414	EST	GR912414:1..439 +
GR915130	EST	GR915130:1..421 +

Unigenes

This contig is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	contig

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Relationships

The following EST feature(s) are a part of this contig:


Feature Name	Unique Name	Species	Type
FL512456	FL512456	Cicer arietinum	EST
GR912414	GR912414	Cicer arietinum	EST
GR915130	GR915130	Cicer arietinum	EST

Homology

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. SwissProt
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.326e-8
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            YTVGD +GW I  +    Y+TWAS K+F VGD LVFN+    H V+EV ++ Y
Sbjct:   27 YTVGDTSGWVIGGD----YSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDY 75

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. SwissProt
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 8.838e-8
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYT-TWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            YTVGD  GW +P  G   Y   WAS K+F +GDVLVF +    HNV++VT+  Y
Sbjct:    3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNY 56

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. SwissProt
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 53.9138 bits (128), Expect = 3.358e-7
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = -1

Query:   38 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEV 181
            + VGD  GW++P++  + Y+ WA+GK+F+VGD L FNF    HNV E+
Sbjct:    5 HIVGDNTGWSVPSS-PNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEM 51

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. SwissProt
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 5.728e-7
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = -1

Query:   23 NYTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 184
            +Y VGD   WT P +    YTTWA+GK+F+VGD L F+FA   H+V  V++A +
Sbjct:   24 DYDVGDDTEWTRPMD-PEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAF 76

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: Q9FXS4_TOBAC (NtEIG-A1 protein OS=Nicotiana tabacum GN=NtEIG-A1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.650e-13
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = -1

Query:    2 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKYLGRDHAN 181
            + VGD  GWTIP++GASAYT WA+GK+F VGD LVFNF   TH+V +V KA + G    N
Sbjct:   28 HVVGDNEGWTIPSSGASAYTNWAAGKTFMVGDTLVFNFMTNTHDVLQVPKASFDGCSSQN 87

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: B9RV67_RICCO (Blue copper protein, putative OS=Ricinus communis GN=RCOM_0900030 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.130e-12
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = -1

Query:    2 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKYLGRDHAN 181
            + VGD  GWT+P+NG +AYT WA+GKSF VGD+L FNFA T H+V  V++A Y   ++AN
Sbjct:   26 HVVGDGIGWTVPSNGPAAYTNWATGKSFAVGDILSFNFATTAHDVLRVSEASYDACNNAN 85

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: D7U131_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017332001 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.293e-12
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = -1

Query:    2 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKYLGRDHAN 181
            + VGD  GWT+P NGA+AYT+WAS K F VGD+LVFNFA   H+V E++K  +   +++N
Sbjct:  387 HVVGDSLGWTVPPNGAAAYTSWASNKQFMVGDILVFNFATNEHDVVELSKESFDACNYSN 446

HSP 2 Score: 71.633 bits (174), Expect = 2.783e-11
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            + VGD  GWT+P  GA+ YT+WASGK F VGD LVFNFA   H+V E++K  +
Sbjct:   27 HVVGDNTGWTVPQGGAATYTSWASGKQFVVGDTLVFNFATNVHDVAELSKESF 79

HSP 3 Score: 70.4774 bits (171), Expect = 6.199e-11
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            + VGD  GWT+P  GA+ YT+WASG+ F VGD LVFNFA   H+V E++K  +
Sbjct:  176 HVVGDNTGWTVPQGGAATYTSWASGRQFVVGDTLVFNFATNVHDVAELSKESF 228

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: A5BXA7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023424 PE=4 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.293e-12
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = -1

Query:    2 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKYLGRDHAN 181
            + VGD  GWT+P NGA+AYT+WAS K F VGD+LVFNFA   H+V E++K  +   +++N
Sbjct:   29 HVVGDSLGWTVPPNGAAAYTSWASNKQFMVGDILVFNFATNEHDVVELSKESFDACNYSN 88

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: Q9FYT2_CAPAN (Stellacyanin-like protein CASLP1 OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.631e-11
Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = -1

Query:    2 DVSGGVNYTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKYLGRDHAN 202
            D S    + VGD  GW IP+NGA+AYT WA  K+F+VGD LVFNF    H+V +V K+ + G +  N
Sbjct:   21 DASAQTVHVVGDNTGWVIPSNGAAAYTNWADRKTFRVGDTLVFNFTTNQHDVLQVQKSSFDGCNSQN 87

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: Q9M510_SOLLC (Dicyanin OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.783e-11
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            + VGD  GWT+P  GA++Y+TWA+GKSF VGD+LVFNF   +H+V EV+K  +
Sbjct:   29 HVVGDTLGWTVPNGGAASYSTWAAGKSFVVGDILVFNFRSGSHSVAEVSKGAF 81

HSP 2 Score: 70.4774 bits (171), Expect = 6.199e-11
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            Y VGD  GW++P +G ++Y  WA+ KSFKVGD LVFNF   THNV  V+KA Y
Sbjct:  173 YIVGDNLGWSVPTSGPNSYQRWANNKSFKVGDTLVFNFVNGTHNVAMVSKASY 225

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: B8RIL8_PINPO (Putative phytocyanin OS=Pinus ponderosa GN=phy PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.783e-11
Identity = 31/54 (57.41%), Postives = 37/54 (68.52%), Query Frame = -1

Query:   23 NYTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 184
            +YTVG   GWTIPA+ A  YT W  G +FK+GD+LVF FA   HNV  V+KA Y
Sbjct:   28 SYTVGGSTGWTIPASNAKLYTDWVKGTTFKLGDILVFKFATNVHNVYRVSKADY 81

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: A5AR70_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032660 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.783e-11
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            + VGD  GWT+P  GA+ YT+WASGK F VGD LVFNFA   H+V E++K  +
Sbjct:   27 HVVGDNTGWTVPQGGAATYTSWASGKQFVVGDTLVFNFATNVHDVAELSKESF 79

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: A5BXA8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023425 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.199e-11
Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            + VGD  GWT+P  GA+ YT+WASG+ F VGD LVFNFA   H+V E++K  +
Sbjct:   27 HVVGDNTGWTVPQGGAATYTSWASGRQFVVGDTLVFNFATNVHDVAELSKESF 79

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Match: B9GH36_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_841208 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.804e-10
Identity = 30/53 (56.60%), Postives = 35/53 (66.04%), Query Frame = -1

Query:   23 YTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 181
            Y VGD +GWT+P  GA AY TWASGK+F VGD L FNF    H+V  V K  +
Sbjct:   25 YVVGDNDGWTVPQAGAQAYITWASGKNFMVGDTLTFNFTTNNHDVLRVQKESF 77

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TAIR peptide
Match: AT3G17675.1 (| Symbols: | Cupredoxin superfamily protein | chr3:6042244-6042781 REVERSE LENGTH=106)

HSP 1 Score: 56.9954 bits (136), Expect = 4.791e-9
Identity = 27/58 (46.55%), Postives = 32/58 (55.17%), Query Frame = -1

Query:   23 SGGVNYTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 196
            S G  + VGD NGW +  N    YT W  G+ F VGDVLVFN+    HNV +V    Y
Sbjct:    4 SEGTEHIVGDSNGWELFTN----YTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAY 57

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TAIR peptide
Match: AT5G20230.1 (| Symbols: ATBCB, BCB, SAG14 | blue-copper-binding protein | chr5:6826626-6827408 FORWARD LENGTH=196)

HSP 1 Score: 53.1434 bits (126), Expect = 6.919e-8
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = -1

Query:   23 NYTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 184
            +Y VGD   WT P +    YTTWA+GK+F+VGD L F+FA   H+V  V++A +
Sbjct:   24 DYDVGDDTEWTRPMD-PEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAF 76

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TAIR peptide
Match: AT2G31050.1 (| Symbols: | Cupredoxin superfamily protein | chr2:13212150-13212752 FORWARD LENGTH=200)

HSP 1 Score: 50.0618 bits (118), Expect = 5.857e-7
Identity = 27/57 (47.37%), Postives = 34/57 (59.65%), Query Frame = -1

Query:   23 GGVNYTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 193
            GG  + VGD +GWTI +     Y TWAS  +F+VGD LVF +    H+V EVT   Y
Sbjct:   25 GGTVHKVGDSDGWTIMSVN---YETWASTITFQVGDSLVFKYNKDFHDVTEVTHNDY 78

[Close]

BLAST of Cicer_arietinum_v1_Contig917 vs. TAIR peptide
Match: AT2G32300.1 (| Symbols: UCC1 | uclacyanin 1 | chr2:13722510-13723464 FORWARD LENGTH=261)

HSP 1 Score: 50.0618 bits (118), Expect = 5.857e-7
Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = -1

Query:   23 NYTVGDINGWTIPANGASAYTTWASGKSFKVGDVLVFNFAFTTHNVEEVTKAKY 184
            ++T+G  +GWT+ A+      TWA+G++F VGD LVF++    H+V EVTK ++
Sbjct:   25 DHTIGGPSGWTVGAS----LRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEF 74

The following BLAST results are available for this feature:

BLAST of Cicer_arietinum_v1_Contig917 vs. SwissProt
BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
BLAST of Cicer_arietinum_v1_Contig917 vs. TAIR peptide

BLAST of Cicer_arietinum_v1_Contig917 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
BCP_PEA	2.326e-8	50.94	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]
STEL_RHUVE	8.838e-8	50.00	Stellacyanin OS=Rhus vernicifera PE=1 SV=1	[more]
CPC_CUCSA	3.358e-7	47.92	Cucumber peeling cupredoxin OS=Cucumis sativus PE=...	[more]
BCB1_ARATH	5.728e-7	48.15	Blue copper protein OS=Arabidopsis thaliana GN=BCB...	[more]

BLAST of Cicer_arietinum_v1_Contig917 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9FXS4_TOBAC	8.650e-13	58.33	NtEIG-A1 protein OS=Nicotiana tabacum GN=NtEIG-A1 ...	[more]
B9RV67_RICCO	1.130e-12	56.67	Blue copper protein, putative OS=Ricinus communis ...	[more]
D7U131_VITVI	4.293e-12	53.33	Whole genome shotgun sequence of line PN40024, sca...	[more]
A5BXA7_VITVI	4.293e-12	53.33	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q9FYT2_CAPAN	1.631e-11	49.25	Stellacyanin-like protein CASLP1 OS=Capsicum annuu...	[more]
Q9M510_SOLLC	2.783e-11	56.60	Dicyanin OS=Solanum lycopersicum PE=2 SV=1	[more]
B8RIL8_PINPO	2.783e-11	57.41	Putative phytocyanin OS=Pinus ponderosa GN=phy PE=...	[more]
A5AR70_VITVI	2.783e-11	56.60	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BXA8_VITVI	6.199e-11	54.72	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9GH36_POPTR	1.804e-10	56.60	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]

BLAST of Cicer_arietinum_v1_Contig917 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT3G17675.1	4.791e-9	46.55	\| Symbols: \| Cupredoxin superfamily protein \| chr...	[more]
AT5G20230.1	6.919e-8	48.15	\| Symbols: ATBCB, BCB, SAG14 \| blue-copper-binding...	[more]
AT2G31050.1	5.857e-7	47.37	\| Symbols: \| Cupredoxin superfamily protein \| chr...	[more]
AT2G32300.1	5.857e-7	42.59	\| Symbols: UCC1 \| uclacyanin 1 \| chr2:13722510-137...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 42..57 score
None	No IPR available	SEG	seg	seg	coord: 22..48 score
None	No IPR available	SEG	seg	seg	coord: 1..17 score: NAcoord: 36..54 score
None	No IPR available	PROFILE	PS51485	PHYTOCYANIN	coord: 81..142 score: 22
None	No IPR available	SEG	seg	seg	coord: 25..75 score
None	No IPR available	SEG	seg	seg	coord: 20..52 score
IPR003245	Plastocyanin-like	PFAM	PF02298	Cu_bind_like	coord: 91..135 score: 3.9
IPR008972	Cupredoxin	GENE3D	2.60.40.420	no description	coord: 81..136 score: 8.4
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 81..135 score: 1.4

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>Cicer_arietinum_v1_Contig917 ID=Cicer_arietinum_v1_Contig917; Name=Cicer_arietinum_v1_Contig917; organism=Cicer arietinum; type=contig; length=439bp
GATTAGCGTGGTCGCGGCCGAGGTACTTTGCCTTTGTCACCTCTTCTACG
TTGTGTGTAGTGAATGCGAAATTGAAAACTAGGACGTCTCCAACTTTGAA
AGACTTGCCAGAAGCCCAAGTTGTATAAGCAGAAGCACCGTTAGCAGGAA
TTGTCCAACCATTGATATCACCAACTGTATAATTAACGCCTCCACTAACA
TCAGCTGGAGAAGGTGCTGGTGCTGGTGTCGCTGTTGGTGTTTGTGTTGG
TGCTAGTGCTGGTGCTTTTGATGGTGCTGGAACAGGACTTGACTTTGGTG
GAGAAGAGGAAGCACTTGGTTGAGGAGCAGAAACAGGTGGTGAAGTAGTA
GAAGCTTTTTTAACAACGTTAATTGACAATTTCTGACCAAGTGAACAGTG
AGTACCTGCCCGGGCGGCCGCTCGAAATCACTAGTGAAT

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005507	copper ion binding
GO:0009055	electron transfer activity

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Search form

Cicer_arietinum_v1_Contig917