Cicer_arietinum_v1_Contig988

Contig Overview
NameCicer_arietinum_v1_Contig988
Unique NameCicer_arietinum_v1_Contig988
Typecontig
OrganismCicer arietinum (chickpea)
Sequence length400
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GR912066ESTGR912066:1..260 +Cicer arietinum unigene v1n/a
GR406895ESTGR406895:113..400 +Cicer arietinum unigene v1n/a
Unigenes
This contig is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1contig
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
Relationships

The following EST feature(s) are a part of this contig:

Feature NameUnique NameSpeciesType
GR912066GR912066Cicer arietinumEST
GR406895GR406895Cicer arietinumEST


Homology
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. SwissProt
Match: RGAP1_ARATH (Uncharacterized Rho GTPase-activating protein At5g61530 OS=Arabidopsis thaliana GN=At5g61530 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 1.107e-46
Identity = 91/128 (71.09%), Postives = 110/128 (85.94%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            SG KL+EA ++AG+FVGEV KD K NVA+VA RVG++ KSRWA  QQP+TRHAVQ+ +I+AAATTG F+R+G++ TK+KV+VGK KVEE AK TAQKSKTILTDIERWQKGVA +DVFGV IE+TV R
Sbjct:   20 SGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSRWAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTILTDIERWQKGVASSDVFGVAIEITVQR 147
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: C6T8Q7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.152e-57
Identity = 115/128 (89.84%), Postives = 118/128 (92.19%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVG+MVKSRWA  QQPSTRHAVQDR ISAAATTG  LRRG SGTKDKV VGKSKVEEVAKITAQKSKTILTDIERWQKG+A TD+FGVPIEVT  R
Sbjct:   20 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGSMVKSRWALLQQPSTRHAVQDRFISAAATTGTLLRRGFSGTKDKVVVGKSKVEEVAKITAQKSKTILTDIERWQKGIASTDLFGVPIEVTAQR 147
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: B9N0M8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_923519 PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.573e-49
Identity = 99/128 (77.34%), Postives = 113/128 (88.28%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            SGVKLKEA +SAGTFVGEV KD K NVA+VA +VG+ VK+RWA  ++PSTRHA+Q+R+I+AAATTG F R+G+S TKDKV VGK+KVEEVAK TAQKSKTILTDIERWQKGVA TDVFGVPIEVTV R
Sbjct:   20 SGVKLKEAGQSAGTFVGEVAKDAKGNVADVAEKVGSAVKTRWAILREPSTRHAMQERLITAAATTGMFFRKGISETKDKVTVGKTKVEEVAKKTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQR 147
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: B9R9W7_RICCO (Rho GTPase activator, putative OS=Ricinus communis GN=RCOM_1501010 PE=4 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.364e-47
Identity = 94/127 (74.02%), Postives = 110/127 (86.61%), Query Frame = -3 
Query:   15 GVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 395
            G KLKEA +SAGT VG+  KD K NVA+ A RVG+ VKS+W F ++P+TRH +Q+++I+AAATTG FLR+G+SGTKDKVAVGK+KVEEVAK TAQKSKTILTDIERWQKGVA TDVFGVPIEVTV R
Sbjct:   12 GTKLKEAGQSAGTLVGDFAKDAKVNVADAAERVGSAVKSQWTFLREPATRHILQEQLITAAATTGMFLRKGMSGTKDKVAVGKTKVEEVAKRTAQKSKTILTDIERWQKGVASTDVFGVPIEVTVQR 138
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: D7MV30_ARALY (Small G protein family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496313 PE=4 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.118e-44
Identity = 90/128 (70.31%), Postives = 109/128 (85.16%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            SG KL+EA ++AG+FVGEV KD K NVA+VA RVG++ KSRWA  QQP+TRHAVQ+ +I+AAATTG  +R+G++ TK+KV+VGK KVEE AK TAQKSKTILTDIERWQKGVA +DVFGV IE+TV R
Sbjct:   20 SGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSRWAILQQPATRHAVQEHLITAAATTGTLVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTILTDIERWQKGVASSDVFGVAIEITVQR 147
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: Q84ZE8_ORYSJ (Auxin-regulated protein-like OS=Oryza sativa subsp. japonica GN=P0683C09.118 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.370e-34
Identity = 83/133 (62.41%), Postives = 95/133 (71.43%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQ-----QPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            S  KLK+A +SAG            N+A+VAG+VG++VKSRWA FQ     QP     VQ+R ISAAATTG  LR+G+S TK+KVAVGK KVEE AK TA KSKTIL +IERWQKGVA TDVFGVPIE TV R
Sbjct:   20 SSFKLKQAGQSAG-----------DNIADVAGKVGSVVKSRWAVFQEARQRQPPPGETVQERFISAAATTGVLLRKGISETKEKVAVGKVKVEEAAKKTADKSKTILNNIERWQKGVASTDVFGVPIEATVQR 141
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: A2YLD6_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26031 PE=4 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.370e-34
Identity = 83/133 (62.41%), Postives = 95/133 (71.43%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQ-----QPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            S  KLK+A +SAG            N+A+VAG+VG++VKSRWA FQ     QP     VQ+R ISAAATTG  LR+G+S TK+KVAVGK KVEE AK TA KSKTIL +IERWQKGVA TDVFGVPIE TV R
Sbjct:   20 SSFKLKQAGQSAG-----------DNIADVAGKVGSVVKSRWAVFQEARQRQPPPGETVQERFISAAATTGVLLRKGISETKEKVAVGKVKVEEAAKKTADKSKTILNNIERWQKGVASTDVFGVPIEATVQR 141
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: C5X958_SORBI (Putative uncharacterized protein Sb02g033540 OS=Sorghum bicolor GN=Sb02g033540 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.675e-32
Identity = 79/134 (58.96%), Postives = 95/134 (70.90%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQ------QPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            S VKLK+A +SAG            N+A+VAG+VG++VKSRWA FQ      Q      VQ+R+I+AAA+TG   R+G+S TK+KVAVGK KVEE AK TA KSK+IL +IERWQKGVA TDVFGVPIE TV R
Sbjct:   20 SSVKLKQAGQSAG-----------DNIADVAGKVGSVVKSRWAVFQEARQQQQHPPHETVQERIITAAASTGLLFRKGISETKEKVAVGKVKVEEAAKKTADKSKSILNNIERWQKGVASTDVFGVPIEATVQR 142
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: B4FPH9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.874e-32
Identity = 79/136 (58.09%), Postives = 93/136 (68.38%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQ--------QPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            S VKLK+A +SAG            N+A+VAG+VG+ VKSRW  FQ        Q      VQ+R+I+AAATTG   R+G+S TK+KVAVGK KVEE AK TA KSK+IL +IERWQKGVA TDVFGVPIE TV R
Sbjct:   20 SSVKLKQAGQSAG-----------DNIADVAGKVGSAVKSRWVVFQEARQQQQQQRPPHETVQERIITAAATTGLLFRKGISETKEKVAVGKVKVEEAAKKTADKSKSILNNIERWQKGVASTDVFGVPIEATVQR 144
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: C0PEE2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.086e-31
Identity = 78/137 (56.93%), Postives = 94/137 (68.61%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQ---------QPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            S VKLK+A +SAG            N+ +VAG+VG++VKSRWA FQ         Q      VQ+R+I+AAA+TG   R+G+S TK+KVAVGK KVEE AK TA KSK+IL +IERWQKGVA TDVFGVPIE TV R
Sbjct:   20 SSVKLKQAGQSAG-----------DNIVDVAGKVGSVVKSRWAVFQEARQQQQQQQRPPHETVQERIITAAASTGLLFRKGISETKEKVAVGKVKVEEAAKKTADKSKSILNNIERWQKGVASTDVFGVPIEATVQR 145
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Match: C0P3U4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.086e-31
Identity = 78/137 (56.93%), Postives = 94/137 (68.61%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQ---------QPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            S VKLK+A +SAG            N+ +VAG+VG++VKSRWA FQ         Q      VQ+R+I+AAA+TG   R+G+S TK+KVAVGK KVEE AK TA KSK+IL +IERWQKGVA TDVFGVPIE TV R
Sbjct:   20 SSVKLKQAGQSAG-----------DNIVDVAGKVGSVVKSRWAVFQEARQQQQQQQRPPHETVQERIITAAASTGLLFRKGISETKEKVAVGKVKVEEAAKKTADKSKSILNNIERWQKGVASTDVFGVPIEATVQR 145
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TAIR peptide
Match: AT5G61530.2 (| Symbols: | small G protein family protein / RhoGAP family protein | chr5:24742630-24744586 FORWARD LENGTH=367)

HSP 1 Score: 184.882 bits (468), Expect = 1.199e-47
Identity = 91/128 (71.09%), Postives = 110/128 (85.94%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            SG KL+EA ++AG+FVGEV KD K NVA+VA RVG++ KSRWA  QQP+TRHAVQ+ +I+AAATTG F+R+G++ TK+KV+VGK KVEE AK TAQKSKTILTDIERWQKGVA +DVFGV IE+TV R
Sbjct:   20 SGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSRWAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTILTDIERWQKGVASSDVFGVAIEITVQR 147
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TAIR peptide
Match: AT5G61530.1 (| Symbols: | small G protein family protein / RhoGAP family protein | chr5:24742630-24744586 FORWARD LENGTH=376)

HSP 1 Score: 184.882 bits (468), Expect = 1.199e-47
Identity = 91/128 (71.09%), Postives = 110/128 (85.94%), Query Frame = -3 
Query:   15 SGVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 398
            SG KL+EA ++AG+FVGEV KD K NVA+VA RVG++ KSRWA  QQP+TRHAVQ+ +I+AAATTG F+R+G++ TK+KV+VGK KVEE AK TAQKSKTILTDIERWQKGVA +DVFGV IE+TV R
Sbjct:   20 SGTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSRWAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTILTDIERWQKGVASSDVFGVAIEITVQR 147
[Close]
BLAST of Cicer_arietinum_v1_Contig988 vs. TAIR peptide
Match: AT5G61530.3 (| Symbols: | small G protein family protein / RhoGAP family protein | chr5:24742405-24744586 FORWARD LENGTH=376)

HSP 1 Score: 183.341 bits (464), Expect = 3.487e-47
Identity = 90/127 (70.87%), Postives = 109/127 (85.83%), Query Frame = -3 
Query:   15 GVKLKEAKESAGTFVGEVTKDTKSNVAEVAGRVGTMVKSRWAFFQQPSTRHAVQDRMISAAATTGAFLRRGLSGTKDKVAVGKSKVEEVAKITAQKSKTILTDIERWQKGVAKTDVFGVPIEVTVPR 395
            G KL+EA ++AG+FVGEV KD K NVA+VA RVG++ KSRWA  QQP+TRHAVQ+ +I+AAATTG F+R+G++ TK+KV+VGK KVEE AK TAQKSKTILTDIERWQKGVA +DVFGV IE+TV R
Sbjct:   21 GTKLREAGQTAGSFVGEVAKDAKVNVADVAERVGSLFKSRWAILQQPATRHAVQEHLITAAATTGTFVRKGITETKEKVSVGKIKVEEAAKKTAQKSKTILTDIERWQKGVASSDVFGVAIEITVQR 147
The following BLAST results are available for this feature:
BLAST of Cicer_arietinum_v1_Contig988 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
RGAP1_ARATH1.107e-4671.09Uncharacterized Rho GTPase-activating protein At5g... [more]
back to top
BLAST of Cicer_arietinum_v1_Contig988 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T8Q7_SOYBN1.152e-5789.84Putative uncharacterized protein OS=Glycine max PE... [more]
B9N0M8_POPTR2.573e-4977.34Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9R9W7_RICCO5.364e-4774.02Rho GTPase activator, putative OS=Ricinus communis... [more]
D7MV30_ARALY1.118e-4470.31Small G protein family protein OS=Arabidopsis lyra... [more]
Q84ZE8_ORYSJ1.370e-3462.41Auxin-regulated protein-like OS=Oryza sativa subsp... [more]
A2YLD6_ORYSI1.370e-3462.41Putative uncharacterized protein OS=Oryza sativa s... [more]
C5X958_SORBI1.675e-3258.96Putative uncharacterized protein Sb02g033540 OS=So... [more]
B4FPH9_MAIZE4.874e-3258.09Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C0PEE2_MAIZE1.086e-3156.93Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
C0P3U4_MAIZE1.086e-3156.93Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
back to top
BLAST of Cicer_arietinum_v1_Contig988 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G61530.21.199e-4771.09| Symbols: | small G protein family protein / Rho... [more]
AT5G61530.11.199e-4771.09| Symbols: | small G protein family protein / Rho... [more]
AT5G61530.33.487e-4770.87| Symbols: | small G protein family protein / Rho... [more]
back to top
Sequences
The following sequences are available for this feature:

contig sequence

>Cicer_arietinum_v1_Contig988 ID=Cicer_arietinum_v1_Contig988; Name=Cicer_arietinum_v1_Contig988; organism=Cicer arietinum; type=contig; length=400bp
TAGCGTGGTCGCGGCCGAGGTACAGTAACCTCAATAGGAACTCCAAATAC
ATCAGTCTTTGCAACTCCCTTCTGCCATCTTTCAATGTCTGTCAAGATAG
TCTTACTTTTTTGTGCCGTTATTTTTGCCACCTCTTCAACCTTGGACTTC
CCCACAGCCACCTTATCTTTTGTCCCTGACAAACCTCTCCTCAGGAATGC
ACCAGTTGTAGCAGCAGCTGATATCATTCTATCCTGTACAGCATGTCTTG
TGGACGGCTGCTGAAAAAACGCCCACCGACTTTTGACCATCGTCCCGACT
CGTCCCGCCACTTCAGCTACATTACTCTTTGTATCCTTTGTTACCTCGCC
AACAAATGTTCCCGCTGATTCCTTGGCTTCTTTAAGCTTGACCCCTGAGG
back to top