Pisum_sativum_v1_Contig149
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: B9RDE3_RICCO (Cytohesin 1, 2, 3, putative OS=Ricinus communis GN=RCOM_1612320 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.458e-31 Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 2 Query: 11 QQHWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 Q WLIP+GSGKRRELAARAPLIVATLQ I +LGD SFEKNL HFFPLLS LISCEHGS EVQVALSDMLS +VGP+LLRSC Sbjct: 1699 QSQWLIPVGSGKRRELAARAPLIVATLQAICSLGDASFEKNLSHFFPLLSGLISCEHGSNEVQVALSDMLSSTVGPVLLRSC 1780
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: B9IC07_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_572117 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.458e-31 Identity = 70/82 (85.37%), Postives = 72/82 (87.80%), Query Frame = 2 Query: 11 QQHWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 Q WLIPLGSGKRRELA RAPLIVATLQ I +LGD FEKNL HFFPLLSSLISCEHGS EVQVALSDMLS SVGP+LLRSC Sbjct: 1702 QSQWLIPLGSGKRRELATRAPLIVATLQAICSLGDSLFEKNLAHFFPLLSSLISCEHGSNEVQVALSDMLSSSVGPVLLRSC 1783
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: B9GPH8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644349 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.247e-31 Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = 2 Query: 20 WLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 WLIPLGSGKRRELAARAPLIVATLQ I +LGD SFEK L HFFPLLSSLISCEHGS EVQVALSDMLS SVGP+LLRSC Sbjct: 123 WLIPLGSGKRRELAARAPLIVATLQAICSLGDSSFEKKLPHFFPLLSSLISCEHGSNEVQVALSDMLSSSVGPVLLRSC 201
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: D7U7T4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_48.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00027623001 PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.970e-29 Identity = 64/84 (76.19%), Postives = 69/84 (82.14%), Query Frame = 2 Query: 5 GRQQHWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 G Q WLIPLGSGKRRELA RAPL+V TLQ + LGD SFE+NL FFPLLSSLI CEHGS EVQVALS+ML SVGP+LLRSC Sbjct: 1670 GVQPRWLIPLGSGKRRELATRAPLVVVTLQAVCGLGDTSFERNLAQFFPLLSSLIGCEHGSNEVQVALSEMLRSSVGPVLLRSC 1753
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: C5WQY7_SORBI (Putative uncharacterized protein Sb01g041140 OS=Sorghum bicolor GN=Sb01g041140 PE=4 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.970e-28 Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 17 HWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 HWLIP+GS KRRELAARAPL+V+TLQ IS LGD +FEKNL FFPLLS LISCEHGS+EVQVALSDM S VGPL+L+SC Sbjct: 1715 HWLIPVGSSKRRELAARAPLVVSTLQAISGLGDSAFEKNLGQFFPLLSGLISCEHGSSEVQVALSDMFSTWVGPLVLQSC 1794
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: Q8S565_ORYSA (Guanine nucleotide-exchange protein GEP2 OS=Oryza sativa GN=GEP2 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.777e-28 Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 17 HWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 HWLIP+GS KRRELAARAPL+V+TLQ IS LGD SFEKNL FFPLL+ LISCEHGS+EVQVALSDM S VGP++L++C Sbjct: 1710 HWLIPVGSSKRRELAARAPLVVSTLQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQTC 1789
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: Q10P53_ORYSJ (Os03g0246800 protein OS=Oryza sativa subsp. japonica GN=Os03g0246800 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.777e-28 Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 17 HWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 HWLIP+GS KRRELAARAPL+V+TLQ IS LGD SFEKNL FFPLL+ LISCEHGS+EVQVALSDM S VGP++L++C Sbjct: 1710 HWLIPVGSSKRRELAARAPLVVSTLQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQTC 1789
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: B9F6R9_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_10127 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.777e-28 Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 17 HWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 HWLIP+GS KRRELAARAPL+V+TLQ IS LGD SFEKNL FFPLL+ LISCEHGS+EVQVALSDM S VGP++L++C Sbjct: 1710 HWLIPVGSSKRRELAARAPLVVSTLQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQTC 1789
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: B8AK12_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10738 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.777e-28 Identity = 61/80 (76.25%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 17 HWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 HWLIP+GS KRRELAARAPL+V+TLQ IS LGD SFEKNL FFPLL+ LISCEHGS+EVQVALSDM S VGP++L++C Sbjct: 1710 HWLIPVGSSKRRELAARAPLVVSTLQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQTC 1789
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Match: D7LRV1_ARALY (Guanine nucleotide exchange family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486560 PE=4 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.007e-26 Identity = 61/82 (74.39%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 11 QQHWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 + W IPLGSGKRRELAARAPLIVATLQ I L + SFEKNL FPLL+SLISCEHGS EVQ AL+DML LSVGP+LL+ C Sbjct: 1712 EYRWRIPLGSGKRRELAARAPLIVATLQAICTLEEASFEKNLKCLFPLLASLISCEHGSNEVQTALADMLGLSVGPVLLQWC 1793
BLAST of Pisum_sativum_v1_Contig149 vs. TAIR peptide
Match: AT3G60860.1 (| Symbols: | SEC7-like guanine nucleotide exchange family protein | chr3:22484804-22491510 FORWARD LENGTH=1793) HSP 1 Score: 117.087 bits (292), Expect = 3.972e-27 Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 2 Query: 11 QQHWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 + W IPLGSGKRREL+ARAPLIVATLQ + L + SFEKNL FPLL++LISCEHGS EVQ AL+DML LSVGP+LL+ C Sbjct: 1712 EYRWRIPLGSGKRRELSARAPLIVATLQAMCTLDEASFEKNLKCLFPLLANLISCEHGSNEVQTALADMLGLSVGPVLLQWC 1793
BLAST of Pisum_sativum_v1_Contig149 vs. TAIR peptide
Match: AT1G01960.1 (| Symbols: EDA10 | SEC7-like guanine nucleotide exchange family protein | chr1:330830-337582 REVERSE LENGTH=1750) HSP 1 Score: 114.775 bits (286), Expect = 1.971e-26 Identity = 52/83 (62.65%), Postives = 67/83 (80.72%), Query Frame = 2 Query: 8 RQQHWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC 256 + W +P GSGK++EL ARAPL+VA +QT+ N+G+ F+KNL FPL+++LISCEHGS EVQVALSDML S+GP+LLRSC Sbjct: 1667 QSSRWAVPSGSGKKKELTARAPLVVAAIQTLGNMGESLFKKNLPELFPLIATLISCEHGSGEVQVALSDMLQTSMGPVLLRSC 1749
BLAST of Pisum_sativum_v1_Contig149 vs. TAIR peptide
Match: AT4G38200.1 (| Symbols: | SEC7-like guanine nucleotide exchange family protein | chr4:17915293-17922502 FORWARD LENGTH=1687) HSP 1 Score: 63.5438 bits (153), Expect = 5.212e-11 Identity = 28/77 (36.36%), Postives = 49/77 (63.64%), Query Frame = 2 Query: 14 QHWLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLL 244 ++W++P+G+ + E AAR+PL+VA L+ + L SF++ +FFPLL L+ EH S++V LS + +G ++ Sbjct: 1609 KNWILPMGAASKEEAAARSPLVVAVLKALRELKRDSFKRYAPNFFPLLVELVRSEHSSSQVPQVLSTVFHTCMGAMM 1685
BLAST of Pisum_sativum_v1_Contig149 vs. TAIR peptide
Match: AT4G35380.1 (| Symbols: | SEC7-like guanine nucleotide exchange family protein | chr4:16819883-16825960 FORWARD LENGTH=1706) HSP 1 Score: 59.3066 bits (142), Expect = 9.830e-10 Identity = 28/75 (37.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 20 WLIPLGSGKRRELAARAPLIVATLQTISNLGDVSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLL 244 W++P+ S + E AR L+V++L+ + +L S +K++ FFPLL L+ EH S +V LS++L +GP+L Sbjct: 1631 WVLPMESDRVEEATARTSLLVSSLEALCSLEAESLKKHVSSFFPLLVDLVRTEHCSPQVPYVLSNVLKSCIGPIL 1705 The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig149 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of Pisum_sativum_v1_Contig149 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Pisum_sativum_v1_Contig149 ID=Pisum_sativum_v1_Contig149; Name=Pisum_sativum_v1_Contig149; organism=Pisum sativum; type=contig; length=442bpback to top |