Pisum_sativum_v1_Contig2109
Contig Overview
Alignments
The following features are aligned
Unigenes
This contig is part of the following unigenes:
Analyses
This contig is derived from or has results from the following analyses
Relationships
The following EST feature(s) are a part of this contig:
Homology
BLAST of Pisum_sativum_v1_Contig2109 vs. SwissProt
Match: U136_ARATH (UPF0136 membrane protein At2g26240 OS=Arabidopsis thaliana GN=At2g26240 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.467e-24 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 269 MALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 M S+SQK TL YA L+G GG+MGY +YV+TELPG PVLASS+G+ SAAL +MGSR+ ++ KV PAG+VS+VSL+MTG YLHG++RSS Sbjct: 1 MDSSLSQKFTLAYASLLGVGGLMGYLKRGSKISLVAGGGSAALFYYVYTELPGNPVLASSIGIVGSAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLHGLIRSS 108
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: B7FFA9_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.862e-54 Identity = 125/198 (63.13%), Postives = 130/198 (65.66%), Query Frame = 2 Query: 2 STIPRSFLAHPPSFPTFTLSNPHSQIAVVSSDSKATSFDLSAPDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SNGDKRKMALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 +T RSFLA PPSFP +LSN HSQ+AVVSSDSK T FDLSAPDL S+GDKR MALSMSQKLTLGYAILVGAGGVMG+ FYVFTELPGRPVLASSVGLGISAALL VMGSRFKKSGKVFPAGVVSLVS IMTGGYLHGIMRSS Sbjct: 30 TTFTRSFLASPPSFPYLSLSNSHSQLAVVSSDSKTTQFDLSAPDLDNTGGGGDIKGNGDDFSGGGGGGEGGGGGDDSGKGEEGSDGDKRNMALSMSQKLTLGYAILVGAGGVMGFLKSGSQKSLLAGGLSSALLFYVFTELPGRPVLASSVGLGISAALLVVMGSRFKKSGKVFPAGVVSLVSFIMTGGYLHGIMRSS 227
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: B8LPI2_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 2.003e-32 Identity = 75/111 (67.57%), Postives = 82/111 (73.87%), Query Frame = 2 Query: 260 KRKMALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 KR+MALSMSQKLTLGYA LVG GG+MGY +YV T+LP RP AS+VGLG+SA LL VMGSRFK SGK+FPAGVVSLVSLIMTGGYLHGI RSS Sbjct: 154 KRRMALSMSQKLTLGYAALVGVGGLMGYIKSGSNKSLVSGGLSALLLYYVHTQLPVRPAFASAVGLGVSALLLLVMGSRFKNSGKIFPAGVVSLVSLIMTGGYLHGIFRSS 264
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: B4FL61_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.616e-32 Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 2 Query: 251 NGDKRKMA--LSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 +G++ KM LSMSQKLTL YA LVGAGGVMGY + V T+LP RPVLASS+GLGISAALLSVMGSRFKKSGKVFPAGVVSLVSL+M GGY HGI+RSS Sbjct: 85 DGEEEKMGQGLSMSQKLTLAYAALVGAGGVMGYMKSGSQKSLAAGGISALVLYVVHTQLPVRPVLASSIGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLVMVGGYFHGILRSS 200
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: C5Y9G2_SORBI (Putative uncharacterized protein Sb06g031070 OS=Sorghum bicolor GN=Sb06g031070 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.696e-31 Identity = 72/112 (64.29%), Postives = 83/112 (74.11%), Query Frame = 2 Query: 257 DKRKMALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 +K + LS+SQKLTL YA LVGAGGVMGY ++V T+LP RPV ASS+GLGI+AALLSVMGSRFKKSGK+FPAGVVSLVSL+M GGY HGI+RSS Sbjct: 95 EKMEQGLSLSQKLTLAYAALVGAGGVMGYMKSGSQKSLAAGGISALVLYFVHTQLPVRPVFASSIGLGIAAALLSVMGSRFKKSGKIFPAGVVSLVSLVMVGGYFHGILRSS 206
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: Q7XPM7_ORYSJ (OSJNBa0060D06.17 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0060D06.17 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.893e-31 Identity = 73/115 (63.48%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 254 GDKRKMA--LSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 G++ KM LSMSQK+TL YA LVGAGG MGY ++V T+LP RPV ASS+GLGISAALLSVMGSRFKKSGK+FPAGVVSLVSL+M GGY+HGI+RS+ Sbjct: 91 GEEEKMGQGLSMSQKITLAYAALVGAGGAMGYMKSGSQKSLAAGGISALVLYFVHTQLPVRPVFASSIGLGISAALLSVMGSRFKKSGKIFPAGVVSLVSLVMVGGYIHGILRST 205
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: A3AY48_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_16441 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.893e-31 Identity = 73/115 (63.48%), Postives = 85/115 (73.91%), Query Frame = 2 Query: 254 GDKRKMA--LSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 G++ KM LSMSQK+TL YA LVGAGG MGY ++V T+LP RPV ASS+GLGISAALLSVMGSRFKKSGK+FPAGVVSLVSL+M GGY+HGI+RS+ Sbjct: 91 GEEEKMGQGLSMSQKITLAYAALVGAGGAMGYMKSGSQKSLAAGGISALVLYFVHTQLPVRPVFASSIGLGISAALLSVMGSRFKKSGKIFPAGVVSLVSLVMVGGYIHGILRST 205
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: B9RR06_RICCO (Transmembrane protein 14, putative OS=Ricinus communis GN=RCOM_0708200 PE=4 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.099e-30 Identity = 69/110 (62.73%), Postives = 81/110 (73.64%), Query Frame = 2 Query: 260 KRKMALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRS 589 K+KMALSMSQKLTLGYA LVG GG MGY +YV+T+LP PV ASS+GLG+S+ LL VMGSRF +S KVFPAGVVSLVSL+MTGGY+HG++RS Sbjct: 130 KKKMALSMSQKLTLGYAALVGMGGAMGYLKSGSQKSLLAGGLSASVLYYVYTQLPTNPVYASSIGLGVSSVLLGVMGSRFLRSKKVFPAGVVSLVSLVMTGGYIHGVLRS 239
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: B9HCN6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_866999 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.875e-30 Identity = 71/107 (66.36%), Postives = 78/107 (72.90%), Query Frame = 2 Query: 269 MALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRS 589 MALSMSQKLTLGYA LVG GG MGY +YV+T+LP PV ASS+GLGISAAL+ VMGSRF KS K+FPAGVVSLVS IMTGGYLHGI+RS Sbjct: 1 MALSMSQKLTLGYAALVGIGGAMGYMKSGSQKSLLAGGISASVLYYVYTQLPANPVYASSIGLGISAALMGVMGSRFLKSRKIFPAGVVSLVSFIMTGGYLHGILRS 107
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: D7TB54_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_130.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00000275001 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.449e-30 Identity = 69/105 (65.71%), Postives = 79/105 (75.24%), Query Frame = 2 Query: 275 LSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRS 589 +SMSQKLTLGYA LVG GGVMGY +YV+T+LP RP AS +GLG+SAAL+ VMGSRFKKSGK+FPAGVVSLVSL+MTGGYLHGI+RS Sbjct: 1 MSMSQKLTLGYAALVGVGGVMGYMKSGSQKSLAAGGLSALLLYYVYTQLPTRPAFASFLGLGLSAALVGVMGSRFKKSGKLFPAGVVSLVSLVMTGGYLHGILRS 105
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Match: A9SYF6_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137409 PE=4 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 7.373e-27 Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 2 Query: 275 LSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSSSH 598 +SMSQKLTL YAILVG GG+MG+ +YV+ LP PV+AS++GLGIS LL +MGSR+ +SGKVFPAGVVSL SL+M GGY+HGI+RS+ H Sbjct: 1 MSMSQKLTLAYAILVGVGGLMGFAKSGSSKSLMAGGGSASILYYVYLNLPSNPVMASAIGLGISGMLLFIMGSRYMESGKVFPAGVVSLFSLVMAGGYIHGIVRSAHH 108
BLAST of Pisum_sativum_v1_Contig2109 vs. TAIR peptide
Match: AT3G43520.1 (| Symbols: | Transmembrane proteins 14C | chr3:15406088-15407699 FORWARD LENGTH=240) HSP 1 Score: 122.094 bits (305), Expect = 3.149e-28 Identity = 61/110 (55.45%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 260 KRKMALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRS 589 K+ LSMSQKLTLGYA LVG GG+MGY YVF++LP +PVLAS+VG+ ++ AL+ VMG+R+ +S K+FPAGVVS++S IMTGGY+HGIMRS Sbjct: 129 KKSTPLSMSQKLTLGYAFLVGVGGLMGYLKSGSQKSLLAGGLSAAVLLYVFSQLPTKPVLASTVGVVMAGALMYVMGTRYMRSKKIFPAGVVSIMSFIMTGGYIHGIMRS 238
BLAST of Pisum_sativum_v1_Contig2109 vs. TAIR peptide
Match: AT2G26240.1 (| Symbols: | Transmembrane proteins 14C | chr2:11167496-11168373 REVERSE LENGTH=108) HSP 1 Score: 113.235 bits (282), Expect = 1.463e-25 Identity = 58/108 (53.70%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 269 MALSMSQKLTLGYAILVGAGGVMGYXXXXXXXXXXXXXXXXXXXFYVFTELPGRPVLASSVGLGISAALLSVMGSRFKKSGKVFPAGVVSLVSLIMTGGYLHGIMRSS 592 M S+SQK TL YA L+G GG+MGY +YV+TELPG PVLASS+G+ SAAL +MGSR+ ++ KV PAG+VS+VSL+MTG YLHG++RSS Sbjct: 1 MDSSLSQKFTLAYASLLGVGGLMGYLKRGSKISLVAGGGSAALFYYVYTELPGNPVLASSIGIVGSAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLHGLIRSS 108 The following BLAST results are available for this feature:
BLAST of Pisum_sativum_v1_Contig2109 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 1
BLAST of Pisum_sativum_v1_Contig2109 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of Pisum_sativum_v1_Contig2109 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Sequences
The
following sequences are available for this feature:
contig sequence >Pisum_sativum_v1_Contig2109 ID=Pisum_sativum_v1_Contig2109; Name=Pisum_sativum_v1_Contig2109; organism=Pisum sativum; type=contig; length=735bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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