Aluminum tolerance

QTL Overview
QTL LabelqALT.BM4/L4602.LG01
Published SymbolqAlt_fs
Trait NameAluminum tolerance
Trait AliasN/A
Trait StudyLentil-Aluminum_tolerance-Singh-2018
PopulationBM4/L4602-F2
Female ParentBM-4
Male ParentL 4602
Colocalizing MarkerPLC88
Neighboring MarkerPBA_LC_0373
PLC88
EnvironmentN/A
LOD140.5
Additivity Dominance RatioN/A
R20.52
CommentsN/A
Contact
NameDetails
Dharmendra Singh
First name:Dharmendra
Last name:Singh
Title:Researcher
Institution:Indian Agricultural Research Institute
Address:Division of Genetics, Indian Agricultural Research Institute, New Delhi-12, India
Country:India
Email:dsingh_gen@iari.res.in
Last update:Aug 2019
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Lcu.2RBY.Chr7supercontigLcu.2RBY.Chr7:494514828..494515017 .Lens culinaris CDC Redberry genome v2.0PCD QTL alignment to genome using associated markers
Map Positions
#Map NameLinkage GroupBinChromosomePeakSpan StartSpan StopMapViewer
1Lentil-BM4/L4602-F2LG01N/AN/A2--View
Sequences
The following sequences are available for this feature:

QTL from alignment at Lcu.2RBY.Chr7:494514828..494515017

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qALT.BM4/L4602.LG01 ID=qALT.BM4/L4602.LG01; Name=Aluminum tolerance; organism=Lens culinaris; type=QTL; length=190bp; location=Sequence derived from: Lcu.2RBY.Chr7:494514828..494515017 (Lens culinaris
CCAAAACAAGCACCAGTACAAGCACCAACACCAACACCAACACCAGCCAC
AACCACAACCGCTTCACCTGCCCCAGCACCAACCAGCAGCAGAAGCCCAG
CCACATCACCTTCCCCGTCCGCCTCACCACCTTCTCCTGCCGCCGGTGCT
ACTCCACCTTCTTCCTCTGCTTCTCCTCCAACGTCTTCTA
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