CcMt_166_EST | PulseDB

Marker Overview

Marker Overview


Name	CcMt_166_EST
Genbank ID	N/A
Type	EST marker
Species	Cajanus cajan
Primer 1	CcMt_166_EST.Forward: TTGAAGCTAGGGCTGCTAGG
Primer 2	CcMt_166_EST.Reverse: CCCTTTCCAGGTATATCTTGCT
Publication	[view all]
Contact	H Lohithaswa

Contact

Name

Details

H Lohithaswa

First name:	H
Last name:	Lohithaswa
Institution:	Department of Genetics and Plant Breeding, College of Agriculture, V.C. Farm
Country:	India
Email:	lohithaswa.chandappa@gmail.com
Last update:	Jun 2021

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr4LG4	supercontig	chr4LG4:119716281..119716770 .	Pisum sativum Cameor genome v1a	PCD marker alignment to genome using primer sequences
Ca7	chromosome	Ca7:10000174..10000735 .	Cicer arietinum CDC Frontier genome v1.0	PCD marker alignment to genome using primer sequences
chr4	chromosome	chr4:960823296..960823786 .	Vicia faba inbred line Hedin/2 genome v1.0	PCD marker alignment to genome using primer sequences
chr11	chromosome	chr11:2865378..2866310 .	Vigna radiata cv. VC1973A genome v6.0	PCD marker alignment to genome using primer sequences
Chr5	chromosome	Chr5:185995388..185995866 .	Vicia sativa cv. Studenica genome v1.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2021	Shilpa HB, Lohithaswa HC. Discovery of SNPs in important legumes through comparative genome analysis and conversion of SNPs into PCR-based markers.. Journal of genetics. 2021; 100.