CcMt_121_EST | PulseDB

Marker Overview

Marker Overview


Name	CcMt_121_EST
Genbank ID	N/A
Type	EST marker
Species	Cajanus cajan
Primer 1	CcMt_121_EST.Forward: AACCAAGAACACAGCGAACC
Primer 2	CcMt_121_EST.Reverse: CTTGGTGCTGAAATTGTTGG
Publication	[view all]
Contact	H Lohithaswa

Contact

Name

Details

H Lohithaswa

First name:	H
Last name:	Lohithaswa
Institution:	Department of Genetics and Plant Breeding, College of Agriculture, V.C. Farm
Country:	India
Email:	lohithaswa.chandappa@gmail.com
Last update:	Jun 2021

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca2	chromosome	Ca2:30479700..30479980 .	Cicer arietinum CDC Frontier genome v1.0	PCD marker alignment to genome using primer sequences
chr2	chromosome	chr2:30479700..30479980 .	Cicer arietinum CDC Frontier NCBI RefSeq v1	PCD marker alignment to genome using primer sequences
Chr08	supercontig	Chr08:57580024..57580244 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Chr08_WLD	supercontig	Chr08_WLD:38704877..38705097 .	Phaseolus acutifolius acc. W6 15578 genome v2.0	PCD marker alignment to genome using primer sequences
Pl08_G27455	supercontig	Pl08_G27455:51251565..51251785 .	Phaseolus lunatus cv. G27455 genome v1.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2021	Shilpa HB, Lohithaswa HC. Discovery of SNPs in important legumes through comparative genome analysis and conversion of SNPs into PCR-based markers.. Journal of genetics. 2021; 100.