GWAS0000309 | PulseDB

Genome Location

GWAS Overview


GWAS Label	GWAS0000309 [ MapViewer ]
Published Symbol	Shoot weight-Chr7_1
Trait Name	Shoot dry weight
Trait Alias	N/A
GWAS Marker	Chr7_1-197267340
GWAS Study	Lentil-Furasium_root_rot-Heineck-2022
Genome Assembly	Lens culinaris CDC Redberry genome v2.0
Statistical Mothod	N/A
Experimental Model	N/A
GWAS Panel	N/A
LOD	N/A
P Value	3.1622776601684E-5
R2	5.6
Unique key	4787-STWT.Shoot weight-Chr7_1
MAF	0.11
Allele	T/A
Comments	N/A

Terms

The following terms have been associated with this GWAS:

Vocabulary: **Pulse Trait Ontology**
Term	Definition
156:Shoot dry weight	Shoot dry weight

Genome Location


Name	Type	Location	Analysis	MapViewer
Lcu.2RBY.Chr7	supercontig	Lcu.2RBY.Chr7:197267340..197267340	Lens culinaris CDC Redberry genome v2.0	View

Publications


Year	Publication
2022	Heineck GC, Altendorf KR, Ma Y, Coyne CJ, McGee R, Porter L. Phenotypic and genetic characterization of the Lentil Single Plant-Derived core collection for resistance to root rot caused by Fusarium avenaceum.. Phytopathology. 2022 Jun 03.

Properties


Property Name	Value
Unique key	4787-STWT.Shoot weight-Chr7_1
Published symbol	Shoot weight-Chr7_1
MAF	0.11
Allele	T/A
R2	5.6
P value	3.1622776601684E-5