GWAS0000313 | PulseDB

Genome Location

GWAS Overview


GWAS Label	GWAS0000313 [ MapViewer ]
Published Symbol	Root weight-Chr4_2
Trait Name	Root dry weight
Trait Alias	N/A
GWAS Marker	Chr4_2-276102556
GWAS Study	Lentil-Furasium_root_rot-Heineck-2022
Genome Assembly	Lens culinaris CDC Redberry genome v2.0
Statistical Mothod	N/A
Experimental Model	N/A
GWAS Panel	N/A
LOD	N/A
P Value	1.9952623149689E-5
R2	14
Unique key	4787-RTWT.Root weight-Chr4_2
MAF	0.22
Allele	A/T
Comments	N/A

Terms

The following terms have been associated with this GWAS:

Vocabulary: **Pulse Trait Ontology**
Term	Definition
MAIN:csfl_trait_ontology:Root dry weight	Root dry weight

Genome Location


Name	Type	Location	Analysis	MapViewer
Lcu.2RBY.Chr4	supercontig	Lcu.2RBY.Chr4:276102556..276102556	Lens culinaris CDC Redberry genome v2.0	View

Publications


Year	Publication
2022	Heineck GC, Altendorf KR, Ma Y, Coyne CJ, McGee R, Porter L. Phenotypic and genetic characterization of the Lentil Single Plant-Derived core collection for resistance to root rot caused by Fusarium avenaceum.. Phytopathology. 2022 Jun 03.

Properties


Property Name	Value
Unique key	4787-RTWT.Root weight-Chr4_2
Published symbol	Root weight-Chr4_2
MAF	0.22
Allele	A/T
R2	14
P value	1.9952623149689E-5