GWAS0000314 | PulseDB

Genome Location

GWAS Overview


GWAS Label	GWAS0000314 [ MapViewer ]
Published Symbol	Root weight-Chr5_1
Trait Name	Root dry weight
Trait Alias	N/A
GWAS Marker	Chr5_1-2204234
GWAS Study	Lentil-Furasium_root_rot-Heineck-2022
Genome Assembly	Lens culinaris CDC Redberry genome v2.0
Statistical Mothod	N/A
Experimental Model	N/A
GWAS Panel	N/A
LOD	N/A
P Value	7.9432823472428E-5
R2	5.9
Unique key	4787-RTWT.Root weight-Chr5_1
MAF	0.06
Allele	T/A
Comments	N/A

Terms

The following terms have been associated with this GWAS:

Vocabulary: **Pulse Trait Ontology**
Term	Definition
MAIN:csfl_trait_ontology:Root dry weight	Root dry weight

Genome Location


Name	Type	Location	Analysis	MapViewer
Lcu.2RBY.Chr5	supercontig	Lcu.2RBY.Chr5:2204234..2204234	Lens culinaris CDC Redberry genome v2.0	View

Publications


Year	Publication
2022	Heineck GC, Altendorf KR, Ma Y, Coyne CJ, McGee R, Porter L. Phenotypic and genetic characterization of the Lentil Single Plant-Derived core collection for resistance to root rot caused by Fusarium avenaceum.. Phytopathology. 2022 Jun 03.

Properties


Property Name	Value
Unique key	4787-RTWT.Root weight-Chr5_1
Published symbol	Root weight-Chr5_1
MAF	0.06
Allele	T/A
R2	5.9
P value	7.9432823472428E-5