GWAS0000316 | PulseDB

Genome Location

GWAS Overview


GWAS Label	GWAS0000316 [ MapViewer ]
Published Symbol	Shoot length-Chr7_5
Trait Name	Stem length
Trait Alias	N/A
GWAS Marker	Chr7_5-522688296
GWAS Study	Lentil-Furasium_root_rot-Heineck-2022
Genome Assembly	Lens culinaris CDC Redberry genome v2.0
Statistical Mothod	N/A
Experimental Model	N/A
GWAS Panel	N/A
LOD	N/A
P Value	0.00015848931924611
R2	8.3
Unique key	4787-STEMLG.Shoot length-Chr7_5
MAF	0.2
Allele	A/T
Comments	N/A

Terms

The following terms have been associated with this GWAS:

Vocabulary: **Pulse Trait Ontology**
Term	Definition
MAIN:000145141	Stem length

Genome Location


Name	Type	Location	Analysis	MapViewer
Lcu.2RBY.Chr7	supercontig	Lcu.2RBY.Chr7:522688296..522688296	Lens culinaris CDC Redberry genome v2.0	View

Publications


Year	Publication
2022	Heineck GC, Altendorf KR, Ma Y, Coyne CJ, McGee R, Porter L. Phenotypic and genetic characterization of the Lentil Single Plant-Derived core collection for resistance to root rot caused by Fusarium avenaceum.. Phytopathology. 2022 Jun 03.

Properties


Property Name	Value
Unique key	4787-STEMLG.Shoot length-Chr7_5
Published symbol	Shoot length-Chr7_5
MAF	0.2
Allele	A/T
R2	8.3
P value	0.00015848931924611