GR407651

EST Overview


Name	GR407651
Unique Name	GR407651
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	256

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR407651 vs. TrEMBL
Match: C6T8L3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.722e-8
Identity = 40/84 (47.62%), Postives = 50/84 (59.52%), Query Frame = 3

Query:    3 FDSFSSVSIEKHVVXXXXXXXXXXXXNKTHFGETKLC-FGNQASLRCLVWFLDGKDLGARQNSVFLLEEVLCVDELATIEGVVE 251
            FD FSS SI+KHVV                FGE  +    ++ASL  LVWFL+GKDL +RQ++  LL+EV CV ELA +  VVE
Sbjct:  170 FDCFSSNSIDKHVVVLEEVLEVMTWM--IPFGEEGVSKLSSRASLNSLVWFLEGKDLASRQSAALLLKEV-CVQELAKVGNVVE 250

[Close]

BLAST of GR407651 vs. TrEMBL
Match: Q8S8Z6_SOYBN (Syringolide-induced protein 13-1-1 OS=Glycine max GN=13-1-1 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.837e-8
Identity = 42/84 (50.00%), Postives = 49/84 (58.33%), Query Frame = 3

Query:    3 FDSFSSVSIEKHVVXXXXXXXXXXXXNKT-HFGETKLCFGNQASLRCLVWFLDGKDLGARQNSVFLLEEVLCVDELATIEGVVE 251
            FD FSS SIEKHVV                  G +KL  G  ASL  LVWFL+GKDL +RQ++  LL+EV CV ELA +  VVE
Sbjct:  172 FDCFSSNSIEKHVVLLEEVLEVMTWMVPLGEEGVSKLSSG--ASLNSLVWFLEGKDLASRQSAALLLKEV-CVQELAKVGEVVE 252

The following BLAST results are available for this feature:

BLAST of GR407651 vs. TrEMBL

BLAST of GR407651 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 2


Match Name	E-value	Identity	Description
C6T8L3_SOYBN	1.722e-8	47.62	Putative uncharacterized protein OS=Glycine max PE...	[more]
Q8S8Z6_SOYBN	3.837e-8	50.00	Syringolide-induced protein 13-1-1 OS=Glycine max ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 15..26 score
None	No IPR available	SEG	seg	seg	coord: 2..19 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR407651 ID=GR407651; Name=GR407651; organism=Cicer arietinum; type=EST; length=256bp
TTTTTGATTCTTTTTCAAGTGTTTCTATTGAGAAACATGTGGTTATTTTG
GAGGAGATTTTGGAGATTATGATGATGATAAATAAAACCCATTTTGGTGA
AACAAAATTGTGTTTTGGAAATCAAGCTTCTTTACGTTGTTTGGTTTGGT
TTCTAGATGGTAAAGATTTAGGTGCAAGACAAAATTCTGTTTTTTTGCTT
GAAGAAGTTTTGTGTGTTGATGAGTTAGCAACAATTGAAGGTGTTGTTGA
AGGTTT

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