GR393386

EST Overview
NameGR393386
Unique NameGR393386
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length316
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Homology
BLAST of GR393386 vs. SwissProt
Match: U369_DICDI (UPF0369 protein OS=Dictyostelium discoideum GN=DDB_G0278459 PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 7.765e-8
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = -3
Query:   96 EVGGPKGPEPTRYGDWERNGRCSDF 170
            E+GGPKGPEPTRY DWERNGR SDF
Sbjct:   84 EIGGPKGPEPTRYNDWERNGRVSDF 108          
BLAST of GR393386 vs. SwissProt
Match: CF057_MOUSE (UPF0369 protein C6orf57 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 1.014e-7
Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = -3
Query:   96 EVGGPKGPEPTRYGDWERNGRCSDF 170
            E GGPKGPEPTRYGDWER GRC DF
Sbjct:   80 EKGGPKGPEPTRYGDWERKGRCIDF 104          
BLAST of GR393386 vs. SwissProt
Match: CF057_HUMAN (UPF0369 protein C6orf57 OS=Homo sapiens GN=C6orf57 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 2.259e-7
Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = -3
Query:   96 EVGGPKGPEPTRYGDWERNGRCSDF 170
            E GGP+GPEPTRYGDWER GRC DF
Sbjct:   84 EKGGPRGPEPTRYGDWERKGRCIDF 108          
BLAST of GR393386 vs. TrEMBL
Match: C6T3N8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.689e-11
Identity = 35/72 (48.61%), Postives = 39/72 (54.17%), Query Frame = -3
Query:   96 PHNDNTVREQIQSPTPEFFHXXXXXXXXXXXXXXXXXXXXXXXXXTGEVGGPKGPEPTRYGDWERNGRCSDF 311
            P ++N VREQ Q+P  E  H                          GE+GGPKGPEPTRYGDWERNGRCSDF
Sbjct:   38 PQHENPVREQTQTPPQESLHDENKQRYEPKEDDGDGDSINKET---GEIGGPKGPEPTRYGDWERNGRCSDF 106          
BLAST of GR393386 vs. TrEMBL
Match: A5CAH2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018915 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.510e-9
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGPKGPEPTRYGDWERNGRCSDF
Sbjct:   98 GEIGGPKGPEPTRYGDWERNGRCSDF 123          
BLAST of GR393386 vs. TrEMBL
Match: A9PBD3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_732920 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.312e-8
Identity = 24/26 (92.31%), Postives = 26/26 (100.00%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGPKGPEPTR+GDWERNGRCSDF
Sbjct:   93 GEIGGPKGPEPTRFGDWERNGRCSDF 118          
BLAST of GR393386 vs. TrEMBL
Match: Q0A907_ALHEH (Putative uncharacterized protein OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=Mlg_1331 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.238e-8
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = -3
Query:   96 EVGGPKGPEPTRYGDWERNGRCSDF 170
            E+GGPKGPEPTRYGDWERNGRCSDF
Sbjct:   35 EIGGPKGPEPTRYGDWERNGRCSDF 59          
BLAST of GR393386 vs. TrEMBL
Match: B9RII8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1579640 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.923e-8
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGPKGPEPTRYGDWE NGRCSDF
Sbjct:   81 GEIGGPKGPEPTRYGDWELNGRCSDF 106          
BLAST of GR393386 vs. TrEMBL
Match: A5G2G6_ACICJ (Putative uncharacterized protein OS=Acidiphilium cryptum (strain JF-5) GN=Acry_2858 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.986e-8
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = -3
Query:   96 EVGGPKGPEPTRYGDWERNGRCSDF 170
            E+GGPKGPEPTRYGDWERNGRC+DF
Sbjct:   34 EIGGPKGPEPTRYGDWERNGRCTDF 58          
BLAST of GR393386 vs. TrEMBL
Match: Q5VM93_ORYSJ (Os06g0157800 protein OS=Oryza sativa subsp. japonica GN=P0046E09.31 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.986e-8
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGP+GPEPTRYGDWER GRCSDF
Sbjct:   97 GEIGGPRGPEPTRYGDWERGGRCSDF 122          
BLAST of GR393386 vs. TrEMBL
Match: C5Z4E8_SORBI (Putative uncharacterized protein Sb10g003960 OS=Sorghum bicolor GN=Sb10g003960 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.986e-8
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGP+GPEPTRYGDWER GRCSDF
Sbjct:   92 GEIGGPRGPEPTRYGDWERGGRCSDF 117          
BLAST of GR393386 vs. TrEMBL
Match: C5Z4E7_SORBI (Putative uncharacterized protein Sb10g003950 OS=Sorghum bicolor GN=Sb10g003950 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.986e-8
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGP+GPEPTRYGDWER GRCSDF
Sbjct:   92 GEIGGPRGPEPTRYGDWERGGRCSDF 117          
BLAST of GR393386 vs. TrEMBL
Match: B8B310_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21750 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 4.986e-8
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGP+GPEPTRYGDWER GRCSDF
Sbjct:   97 GEIGGPRGPEPTRYGDWERGGRCSDF 122          
BLAST of GR393386 vs. TAIR peptide
Match: AT5G67490.1 (| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1674 (InterPro:IPR012875); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:26934368-26934694 REVERSE LENGTH=108)

HSP 1 Score: 59.3066 bits (142), Expect = 5.547e-10
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = -3
Query:   96 GEVGGPKGPEPTRYGDWERNGRCSDF 173
            GE+GGP+GPEPTRYGDWE+ GRCSDF
Sbjct:   83 GEIGGPRGPEPTRYGDWEQRGRCSDF 108          
The following BLAST results are available for this feature:
BLAST of GR393386 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 3
Match NameE-valueIdentityDescription
U369_DICDI7.765e-888.00UPF0369 protein OS=Dictyostelium discoideum GN=DDB... [more]
CF057_MOUSE1.014e-788.00UPF0369 protein C6orf57 homolog OS=Mus musculus PE... [more]
CF057_HUMAN2.259e-784.00UPF0369 protein C6orf57 OS=Homo sapiens GN=C6orf57... [more]
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BLAST of GR393386 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6T3N8_SOYBN3.689e-1148.61Putative uncharacterized protein OS=Glycine max PE... [more]
A5CAH2_VITVI4.510e-996.15Putative uncharacterized protein OS=Vitis vinifera... [more]
A9PBD3_POPTR1.312e-892.31Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q0A907_ALHEH2.238e-896.00Putative uncharacterized protein OS=Alkalilimnicol... [more]
B9RII8_RICCO2.923e-892.31Putative uncharacterized protein OS=Ricinus commun... [more]
A5G2G6_ACICJ4.986e-892.00Putative uncharacterized protein OS=Acidiphilium c... [more]
Q5VM93_ORYSJ4.986e-888.46Os06g0157800 protein OS=Oryza sativa subsp. japoni... [more]
C5Z4E8_SORBI4.986e-888.46Putative uncharacterized protein Sb10g003960 OS=So... [more]
C5Z4E7_SORBI4.986e-888.46Putative uncharacterized protein Sb10g003950 OS=So... [more]
B8B310_ORYSI4.986e-888.46Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR393386 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G67490.15.547e-1084.62| Symbols: | unknown protein; CONTAINS InterPro D... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 28..50
score
NoneNo IPR availableSEGsegsegcoord: 32..57
score
NoneNo IPR availableSEGsegsegcoord: 22..47
score
IPR012875Protein of unknown function DUF1674PFAMPF07896DUF1674coord: 31..73
score: 1.1

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393386 ID=GR393386; Name=GR393386; organism=Cicer arietinum; type=EST; length=316bp
GCACAATCTATGACTTACATTTTTATTATTATTATTATTATTATGATGAT
GATGATGCTATGGCAATGGTAAAGGTAAAGTGAAAGAAAATATCAAAAAT
CAGAACAGCGGCCGTTGCGTTCCCAATCGCCGTACCTTGTGGGCTCAGGG
CCTTTAGGGCCACCGACCTCACCTGTTTCTTTGTTCACATCAGTGTCATC
GTCTTCTTCTTCTTCTTCTACTTCTTCCTGTTGGTTTTGTTTATTCTGAT
CGTGGAAAAATTCTGGCGTCGGCGACTGTATTTGTTCCCTAACAGTGTTA
TCGTTGTGGGGGTGAG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR012875SDHF4