GR404358
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR404358 vs. SwissProt
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.610e-37 Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKK-VSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 K A +++L S GDDRPLTGCSFSRDGK LATCSL+G +KLW MP V ++ K H ERATDV +SP+ + LATASADR AK W G+LL+TFEGHLDRLAR+AFHPSG Sbjct: 240 KHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSG 351 HSP 2 Score: 52.373 bits (124), Expect = 8.672e-7 Identity = 24/97 (24.74%), Postives = 47/97 (48.45%), Query Frame = -3 Query: 9 GDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHP 296 G R + G +F +DG A+C L +++W + + + F+GH + V +SP HLA+ D + + W+ L H + ++++ + P Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEP 475
BLAST of GR404358 vs. SwissProt
Match: PRP4_BOVIN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.072e-15 Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHN--------HLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 335 K +L+ S+IGDDRP++ C FS + K LAT +G KLWS+P+ + T +GH + + P +LA+ +AD K W+ D + EGH R+AR+ +HPSG Sbjct: 215 KSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSG 334 HSP 2 Score: 53.1434 bits (126), Expect = 5.084e-7 Identity = 32/96 (33.33%), Postives = 47/96 (48.96%), Query Frame = -3 Query: 3 PLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN--DQGSLLRTFEGHLDRLARIAFHPSG 284 P + S + LA+C+ G+ KLWS+ + + V+ +GHT R V + P L T DR + W+ Q +L EGH + IAFH G Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDG 376
BLAST of GR404358 vs. SwissProt
Match: PRP4_PONAB (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.624e-15 Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHN--------HLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 335 K +L+ S+IGDDRP++ C FS + K LAT +G KLWS+P+ + T +GH + + P +LA+ +AD K W+ D + EGH R+AR+ +HPSG Sbjct: 215 KSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG 334 HSP 2 Score: 52.7582 bits (125), Expect = 6.640e-7 Identity = 32/96 (33.33%), Postives = 47/96 (48.96%), Query Frame = -3 Query: 3 PLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN--DQGSLLRTFEGHLDRLARIAFHPSG 284 P + S + LA+C+ G+ KLWS+ + + V+ +GHT R V + P L T DR + W+ Q +L EGH + IAFH G Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDG 376
BLAST of GR404358 vs. SwissProt
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.624e-15 Identity = 43/120 (35.83%), Postives = 64/120 (53.33%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHN--------HLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 335 K +L+ S+IGDDRP++ C FS + K LAT +G KLWS+P+ + T +GH + + P +LA+ +AD K W+ D + EGH R+AR+ +HPSG Sbjct: 215 KSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG 334 HSP 2 Score: 52.7582 bits (125), Expect = 6.640e-7 Identity = 32/96 (33.33%), Postives = 47/96 (48.96%), Query Frame = -3 Query: 3 PLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN--DQGSLLRTFEGHLDRLARIAFHPSG 284 P + S + LA+C+ G+ KLWS+ + + V+ +GHT R V + P L T DR + W+ Q +L EGH + IAFH G Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ-EGHSMGVYDIAFHQDG 376
BLAST of GR404358 vs. SwissProt
Match: PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.624e-15 Identity = 44/120 (36.67%), Postives = 65/120 (54.17%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERA--------TDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 335 K +L+ S+IGDDRP++ C FS + K LAT +G KLWS+P+ + T +GH + V+ P +LA+ +AD K W+ D + EGH R+AR+ +HPSG Sbjct: 216 KSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSG 335
BLAST of GR404358 vs. SwissProt
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.632e-13 Identity = 42/114 (36.84%), Postives = 61/114 (53.51%), Query Frame = -3 Query: 3 LQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPM---------HNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 314 L S+IG +RP+ FS +G A+ S G K+W+ N+ +V F+GHT+R + + + P+ LAT +AD W Q + L EGHL R+ R+AFHPSG Sbjct: 164 LMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSG 277
BLAST of GR404358 vs. SwissProt
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.747e-13 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = -3 Query: 6 PLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPS 284 P+ G +FS D K L +CS +++LWS+ + +KGHT DVA+ P ++ ATAS D+ A+ W+ D LR F GHL + + FHP+ Sbjct: 381 PVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPN 474
BLAST of GR404358 vs. SwissProt
Match: Y2124_ANASP (Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.855e-12 Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = -3 Query: 3 IGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWND-QGSLLRTFEGHLDRLARIAFHPSG 299 IG D + +FS DGK LA+ S KLW++ + K T KGHT+ V++SP +A+ASAD+ + W+ G+L+++ H D + + F+P G Sbjct: 1443 IGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDG 1542 HSP 2 Score: 65.4698 bits (158), Expect = 9.899e-11 Identity = 36/87 (41.38%), Postives = 45/87 (51.72%), Query Frame = -3 Query: 9 SFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHP 269 SFS DGK LA+ S KLW + + K V T KGH + DV +S +A+AS D K WN G L TF GH + + F P Sbjct: 1246 SFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLP 1332 HSP 3 Score: 63.929 bits (154), Expect = 2.880e-10 Identity = 34/99 (34.34%), Postives = 51/99 (51.52%), Query Frame = -3 Query: 3 GDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQ-GSLLRTFEGHLDRLARIAFHPSG 296 G ++ + FS DGK LA+ S + KLW + + + T GH+ V +SP +A S D+ K W+ Q G LL+T GH D + ++F P G Sbjct: 1153 GHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDG 1251 HSP 4 Score: 58.5362 bits (140), Expect = 1.210e-8 Identity = 30/97 (30.93%), Postives = 48/97 (49.48%), Query Frame = -3 Query: 3 DRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 290 ++ + G SF+ G +A+ + K+W + + K + T GH V +SP LA+AS D K WN G +T +GH D + ++F P G Sbjct: 1404 NKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDG 1500 HSP 5 Score: 57.3806 bits (137), Expect = 2.696e-8 Identity = 32/99 (32.32%), Postives = 48/99 (48.48%), Query Frame = -3 Query: 3 GDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 296 G + + SFS DG+ +A+ KLW + + T GH + +V +SP +LA+AS+D K W+ G LL T GH + + F P G Sbjct: 1111 GHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDG 1209 HSP 6 Score: 56.225 bits (134), Expect = 6.005e-8 Identity = 31/90 (34.44%), Postives = 46/90 (51.11%), Query Frame = -3 Query: 3 SFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW-NDQGSLLRTFEGHLDRLARIAFHPSG 269 S SRDG+ +A+ SL KLWS + T GH + V++SP +A+ +D+ K W G+LL+T GH + + F P G Sbjct: 1079 SISRDGQTIASGSLDKTIKLWSRDG-RLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDG 1167 HSP 7 Score: 55.8398 bits (133), Expect = 7.843e-8 Identity = 31/89 (34.83%), Postives = 46/89 (51.69%), Query Frame = -3 Query: 3 FSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 266 FS DG+ +A S KLW + K + T GH + +++SP LA+ASAD+ K W G L++T +GH D + + F G Sbjct: 1205 FSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDG 1293 HSP 8 Score: 54.6842 bits (130), Expect = 1.747e-7 Identity = 30/90 (33.33%), Postives = 46/90 (51.11%), Query Frame = -3 Query: 3 SFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW-NDQGSLLRTFEGHLDRLARIAFHPSG 269 SFS DGK +A+ S +LW + + + H + V ++P + LA+ SAD+ K W + G LL TF GH + + +F P G Sbjct: 1495 SFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDG 1584 HSP 9 Score: 53.5286 bits (127), Expect = 3.893e-7 Identity = 29/89 (32.58%), Postives = 42/89 (47.19%), Query Frame = -3 Query: 3 SFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 269 +F+ DG LA+ S KLW + + TF GH+ ++SP ++A+AS D+ K W G LL T H + F P G Sbjct: 1537 NFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQIDGHLLTTLPQHQAGVMSAIFSPDG 1625
BLAST of GR404358 vs. SwissProt
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.953e-12 Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = -3 Query: 3 IGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHPSG 299 +G + SFS D K L + S +LWSM + ++KGH DV++SP+ ++ ATAS D+ A+ W+ D LR F GHL+ + ++FHP+G Sbjct: 522 VGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNG 621
BLAST of GR404358 vs. SwissProt
Match: LEUNG_ARATH (Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana GN=LUG PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.527e-11 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = -3 Query: 9 FSEIGDDRP----LTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 308 F+E+ R +T C FS DGK LA+ + LW +K +T + HT TD+ +SP LAT+S D+ + W +++G LRTF GH + + FHP Sbjct: 641 FTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHP 746
BLAST of GR404358 vs. TrEMBL
Match: D7TII6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033551001 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.398e-42 Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 K+A +L L SEIGDDRPL+GCSFS DGK LA C+L+G +K+WSMP V KVS KGHTERATDVA+SP NHLATASADR A+ WN +GSLL+TFEGHLDRLARIAFHPSG Sbjct: 77 KEAGSLVLDCSEIGDDRPLSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRTARLWNSEGSLLKTFEGHLDRLARIAFHPSG 187
BLAST of GR404358 vs. TrEMBL
Match: A5ATG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016440 PE=4 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.398e-42 Identity = 83/111 (74.77%), Postives = 94/111 (84.68%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 K+A +L L SEIGDDRPL+GCSFS DGK LA C+L+G +K+WSMP V KVS KGHTERATDVA+SP NHLATASADR A+ WN +GSLL+TFEGHLDRLARIAFHPSG Sbjct: 780 KEAGSLVLDCSEIGDDRPLSGCSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRTARLWNSEGSLLKTFEGHLDRLARIAFHPSG 890
BLAST of GR404358 vs. TrEMBL
Match: B9H9H5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_801796 PE=4 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.183e-41 Identity = 81/110 (73.64%), Postives = 93/110 (84.55%), Query Frame = -3 Query: 3 QAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 332 QA +LSL SE+GDDRPL+GCSFS DG+ LATCSL+G +K+WS+P V KVS KGH ERATDVA+SP+HNHLATASADR A+ WN GSLL FEGHLDRLAR+AFHPSG Sbjct: 242 QAESLSLNCSELGDDRPLSGCSFSCDGEMLATCSLSGVAKIWSVPQVTKVSNLKGHMERATDVAFSPVHNHLATASADRTARLWNTDGSLLMKFEGHLDRLARVAFHPSG 351
BLAST of GR404358 vs. TrEMBL
Match: B9SVT1_RICCO (U4/U6 small nuclear ribonucleoprotein Prp4, putative OS=Ricinus communis GN=RCOM_0255520 PE=4 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 7.671e-41 Identity = 81/112 (72.32%), Postives = 93/112 (83.04%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMH-NHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 +QA + L SEIGDDRPL+GCSFS DG+ LATC+LTG +K+WSMP V+KVST KGHTERATD+ +SP+H NHLATASADR AK WN G +L TF GHLDRLARIAFHPSG Sbjct: 234 EQAGSFVLDSSEIGDDRPLSGCSFSNDGQLLATCALTGVAKIWSMPQVRKVSTLKGHTERATDIVFSPVHNNHLATASADRTAKLWNTDGLVLGTFHGHLDRLARIAFHPSG 345
BLAST of GR404358 vs. TrEMBL
Match: C5WZR9_SORBI (Putative uncharacterized protein Sb01g035220 OS=Sorghum bicolor GN=Sb01g035220 PE=4 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.017e-37 Identity = 77/111 (69.37%), Postives = 87/111 (78.38%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 KQA L+ SEIGDDRPLTGCSFSRD LAT S +G K+WSMP + KV+T KGHTERATDVA+SP + LATASADR AK W GSLL +F+GHLDRLAR+AFHPSG Sbjct: 212 KQAGEFVLECSEIGDDRPLTGCSFSRDASMLATSSWSGIIKVWSMPQITKVATLKGHTERATDVAFSPADDCLATASADRTAKLWKPDGSLLMSFDGHLDRLARLAFHPSG 322
BLAST of GR404358 vs. TrEMBL
Match: B8A0D2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 8.777e-37 Identity = 76/111 (68.47%), Postives = 86/111 (77.48%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 KQA L+ SEIGDDRPLTGCSFSRD LAT S +G K+WSMP + KV+T KGHTERATDV +SP + LATASADR AK W GSLL +F+GHLDRLAR+AFHPSG Sbjct: 217 KQAGEFVLECSEIGDDRPLTGCSFSRDASMLATSSWSGIVKVWSMPQITKVATLKGHTERATDVVFSPADDCLATASADRTAKLWKPDGSLLMSFDGHLDRLARLAFHPSG 327
BLAST of GR404358 vs. TrEMBL
Match: Q10LA2_ORYSJ (U4/U6 small nuclear ribonucleoprotein PRP4, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g23909 PE=4 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.146e-36 Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 KQA + L+ SEIGDDRPLTGCSFSRD LAT S +G K+WSMP V K++T KGHTERATDVA+SP+ + LATASAD+ AK W GSLL +F+GHLDRLAR+AFHPSG Sbjct: 216 KQAEDFVLECSEIGDDRPLTGCSFSRDFSMLATSSWSGMIKVWSMPQVTKIATLKGHTERATDVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDRLARLAFHPSG 326
BLAST of GR404358 vs. TrEMBL
Match: B8APS7_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11600 PE=4 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.146e-36 Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 KQA + L+ SEIGDDRPLTGCSFSRD LAT S +G K+WSMP V K++T KGHTERATDVA+SP+ + LATASAD+ AK W GSLL +F+GHLDRLAR+AFHPSG Sbjct: 125 KQAEDFVLECSEIGDDRPLTGCSFSRDFSMLATSSWSGMIKVWSMPQVTKIATLKGHTERATDVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDRLARLAFHPSG 235
BLAST of GR404358 vs. TrEMBL
Match: A3AI06_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_10872 PE=4 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.146e-36 Identity = 76/111 (68.47%), Postives = 89/111 (80.18%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 KQA + L+ SEIGDDRPLTGCSFSRD LAT S +G K+WSMP V K++T KGHTERATDVA+SP+ + LATASAD+ AK W GSLL +F+GHLDRLAR+AFHPSG Sbjct: 125 KQAEDFVLECSEIGDDRPLTGCSFSRDFSMLATSSWSGMIKVWSMPQVTKIATLKGHTERATDVAFSPVDDCLATASADKTAKLWKTDGSLLLSFDGHLDRLARLAFHPSG 235
BLAST of GR404358 vs. TrEMBL
Match: D7LH79_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483227 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.356e-36 Identity = 75/112 (66.96%), Postives = 86/112 (76.79%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKK-VSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 K A N+ L S GDDRPLTGCSFSRDGK LATCSL+G +KLW MP V ++ K H ERATDV +SP+ + LATASADR AK W G+LL+TFEGHLDRLAR+AFHPSG Sbjct: 236 KHAKNMVLDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSG 347
BLAST of GR404358 vs. TAIR peptide
Match: AT2G41500.1 (| Symbols: LIS, EMB2776 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related | chr2:17304319-17306855 REVERSE LENGTH=554) HSP 1 Score: 153.295 bits (386), Expect = 2.864e-38 Identity = 74/112 (66.07%), Postives = 87/112 (77.68%), Query Frame = -3 Query: 3 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKK-VSTFKGHTERATDVAYSPMHNHLATASADRKAKYWNDQGSLLRTFEGHLDRLARIAFHPSG 335 K A +++L S GDDRPLTGCSFSRDGK LATCSL+G +KLW MP V ++ K H ERATDV +SP+ + LATASADR AK W G+LL+TFEGHLDRLAR+AFHPSG Sbjct: 240 KHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSG 351 HSP 2 Score: 52.373 bits (124), Expect = 6.881e-8 Identity = 24/97 (24.74%), Postives = 47/97 (48.45%), Query Frame = -3 Query: 9 GDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYWN-DQGSLLRTFEGHLDRLARIAFHP 296 G R + G +F +DG A+C L +++W + + + F+GH + V +SP HLA+ D + + W+ L H + ++++ + P Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEP 475
BLAST of GR404358 vs. TAIR peptide
Match: AT2G05720.1 (| Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:2147192-2148215 FORWARD LENGTH=276) HSP 1 Score: 104.76 bits (260), Expect = 1.168e-23 Identity = 56/109 (51.38%), Postives = 69/109 (63.30%), Query Frame = -3 Query: 21 KQAANLSLQFSEIGDDRPLTGCSFSRDGKGLATCSLTGASKLWSMPNV-KKVSTFKGHTERATDVAYSPMHNH-LATASADRKAKYWNDQGSLLRTFEGH--LDRLARI 335 K ++ L S+ GDDRPLTGCS SRDGK L TCSL+G KLW +P V K+ KGH E TDV +S + + LATAS DR K W G+LL+TF+ D LAR+ Sbjct: 48 KHCKDMVLGSSKFGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTDGTLLQTFKASSGFDSLARV 156
BLAST of GR404358 vs. TAIR peptide
Match: AT4G32551.2 (| Symbols: LUG | LisH dimerisation motif;WD40/YVTN repeat-like-containing domain | chr4:15707863-15713359 FORWARD LENGTH=969) HSP 1 Score: 68.1662 bits (165), Expect = 1.212e-12 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = -3 Query: 9 FSEIGDDRP----LTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 308 F+E+ R +T C FS DGK LA+ + LW +K +T + HT TD+ +SP LAT+S D+ + W +++G LRTF GH + + FHP Sbjct: 679 FTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHP 784
BLAST of GR404358 vs. TAIR peptide
Match: AT4G32551.1 (| Symbols: LUG, RON2 | LisH dimerisation motif;WD40/YVTN repeat-like-containing domain | chr4:15707863-15713359 FORWARD LENGTH=931) HSP 1 Score: 68.1662 bits (165), Expect = 1.212e-12 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = -3 Query: 9 FSEIGDDRP----LTGCSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 308 F+E+ R +T C FS DGK LA+ + LW +K +T + HT TD+ +SP LAT+S D+ + W +++G LRTF GH + + FHP Sbjct: 641 FTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHP 746
BLAST of GR404358 vs. TAIR peptide
Match: AT2G32700.7 (| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=806) HSP 1 Score: 63.929 bits (154), Expect = 2.286e-11 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = -3 Query: 9 CSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 272 CSFS DGK LA+ +W+M ++ ST + H TDV + P LAT+S D+ K W +D G LRT GH + I FHP Sbjct: 535 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 624
BLAST of GR404358 vs. TAIR peptide
Match: AT2G32700.6 (| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=785) HSP 1 Score: 63.929 bits (154), Expect = 2.286e-11 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = -3 Query: 9 CSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 272 CSFS DGK LA+ +W+M ++ ST + H TDV + P LAT+S D+ K W +D G LRT GH + I FHP Sbjct: 514 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 603
BLAST of GR404358 vs. TAIR peptide
Match: AT2G32700.2 (| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=787) HSP 1 Score: 63.929 bits (154), Expect = 2.286e-11 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = -3 Query: 9 CSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 272 CSFS DGK LA+ +W+M ++ ST + H TDV + P LAT+S D+ K W +D G LRT GH + I FHP Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605
BLAST of GR404358 vs. TAIR peptide
Match: AT2G32700.1 (| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=787) HSP 1 Score: 63.929 bits (154), Expect = 2.286e-11 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = -3 Query: 9 CSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 272 CSFS DGK LA+ +W+M ++ ST + H TDV + P LAT+S D+ K W +D G LRT GH + I FHP Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605
BLAST of GR404358 vs. TAIR peptide
Match: AT2G32700.4 (| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=787) HSP 1 Score: 63.929 bits (154), Expect = 2.286e-11 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = -3 Query: 9 CSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 272 CSFS DGK LA+ +W+M ++ ST + H TDV + P LAT+S D+ K W +D G LRT GH + I FHP Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605
BLAST of GR404358 vs. TAIR peptide
Match: AT2G32700.5 (| Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=787) HSP 1 Score: 63.929 bits (154), Expect = 2.286e-11 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = -3 Query: 9 CSFSRDGKGLATCSLTGASKLWSMPNVKKVSTFKGHTERATDVAYSPMHNHLATASADRKAKYW--NDQGSLLRTFEGHLDRLARIAFHP 272 CSFS DGK LA+ +W+M ++ ST + H TDV + P LAT+S D+ K W +D G LRT GH + I FHP Sbjct: 516 CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHP 605 The following BLAST results are available for this feature:
BLAST of GR404358 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR404358 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR404358 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR404358 ID=GR404358; Name=GR404358; organism=Cicer arietinum; type=EST; length=337bpback to top |