GR410006

EST Overview


Name	GR410006
Unique Name	GR410006
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	474

Libraries


Library Name	Type
LIBEST_024779 ICC1882 Slow drought stressed root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF4A9_TOBAC (Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.014e-24
Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  S+ F+    ER+L
Sbjct:  286 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTSDDERML 391

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF4A6_TOBAC (Eukaryotic initiation factor 4A-6 (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 6.549e-24
Identity = 64/106 (60.38%), Postives = 72/106 (67.92%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM  R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  S+ F+    ER+L
Sbjct:  127 VNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTKDDERML 232

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF4A_MAIZE (Eukaryotic initiation factor 4A OS=Zea mays PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.553e-24
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ERI+
Sbjct:  283 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIV 388

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF4A3_ORYSJ (Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica GN=Os02g0146600 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.553e-24
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  287 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 392

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF411_TOBAC (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.553e-24
Identity = 64/106 (60.38%), Postives = 72/106 (67.92%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM  R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  S+ F+    ER+L
Sbjct:  286 VNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGHSGRFGRKGVSINFVTKDDERML 391

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF4A1_ORYSJ (Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica GN=Os06g0701100 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.117e-23
Identity = 63/106 (59.43%), Postives = 72/106 (67.92%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM  R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  287 VNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 392

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF414_TOBAC (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.117e-23
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  286 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERML 391

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF410_TOBAC (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.117e-23
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  286 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERML 391

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF4A8_TOBAC (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.905e-23
Identity = 63/106 (59.43%), Postives = 72/106 (67.92%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM  R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  286 VNTRRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERML 391

[Close]

BLAST of GR410006 vs. SwissProt
Match: IF4A7_TOBAC (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.488e-23
Identity = 63/106 (59.43%), Postives = 72/106 (67.92%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM  R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  286 VNTRRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVIKDDERML 391

[Close]

BLAST of GR410006 vs. TrEMBL
Match: Q8H1A5_PEA (DEAD box RNA helicase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.184e-23
Identity = 64/107 (59.81%), Postives = 74/107 (69.16%), Query Frame = -1

Query:  154 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERILG 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+LG
Sbjct:  286 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLG 392

[Close]

BLAST of GR410006 vs. TrEMBL
Match: D7L2A1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_672248 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.158e-23
Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+ H  ER+L
Sbjct:  285 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTHDDERML 390

[Close]

BLAST of GR410006 vs. TrEMBL
Match: Q9SYS8_MAIZE (Translation initiation factor 4A2 (Fragment) OS=Zea mays GN=tif4A2 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:   88 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 193

[Close]

BLAST of GR410006 vs. TrEMBL
Match: Q6T8C6_HELAN (Initiation factor eIF4A-15 OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/107 (58.88%), Postives = 74/107 (69.16%), Query Frame = -1

Query:  154 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERILG 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    E++LG
Sbjct:  286 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDEKMLG 392

[Close]

BLAST of GR410006 vs. TrEMBL
Match: O24558_MAIZE (Translation initiation factor OS=Zea mays GN=eIF-4A PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ERI+
Sbjct:  287 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIV 392

[Close]

BLAST of GR410006 vs. TrEMBL
Match: O24449_MAIZE (Translational initiation factor eIF-4A OS=Zea mays GN=tif-4A3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  287 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDNERML 392

[Close]

BLAST of GR410006 vs. TrEMBL
Match: D2X5K2_PRUPE (DEAD-box RNA helicase-like protein OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  286 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 391

[Close]

BLAST of GR410006 vs. TrEMBL
Match: C5Z8X0_SORBI (Putative uncharacterized protein Sb10g028940 OS=Sorghum bicolor GN=Sb10g028940 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  287 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 392

[Close]

BLAST of GR410006 vs. TrEMBL
Match: C5XUM2_SORBI (Putative uncharacterized protein Sb04g003390 OS=Sorghum bicolor GN=Sb04g003390 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  283 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 388

[Close]

BLAST of GR410006 vs. TrEMBL
Match: C0PHE3_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.210e-22
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVINYDLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  287 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 392

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT3G13920.4 (| Symbols: EIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407)

HSP 1 Score: 107.842 bits (268), Expect = 2.831e-24
Identity = 62/106 (58.49%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  280 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 385

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT3G13920.3 (| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594094 REVERSE LENGTH=402)

HSP 1 Score: 107.842 bits (268), Expect = 2.831e-24
Identity = 62/106 (58.49%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  275 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 380

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT3G13920.2 (| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592586-4594128 REVERSE LENGTH=415)

HSP 1 Score: 107.842 bits (268), Expect = 2.831e-24
Identity = 62/106 (58.49%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  285 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT3G13920.1 (| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=412)

HSP 1 Score: 107.842 bits (268), Expect = 2.831e-24
Identity = 62/106 (58.49%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+    ER+L
Sbjct:  285 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT1G72730.1 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:27378040-27379593 REVERSE LENGTH=414)

HSP 1 Score: 107.457 bits (267), Expect = 3.698e-24
Identity = 61/106 (57.55%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+    ER++
Sbjct:  287 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMM 392

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT1G54270.2 (| Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018 FORWARD LENGTH=407)

HSP 1 Score: 105.531 bits (262), Expect = 1.405e-23
Identity = 61/106 (57.55%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+    +R+L
Sbjct:  280 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRML 385

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT1G54270.1 (| Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018 FORWARD LENGTH=412)

HSP 1 Score: 105.531 bits (262), Expect = 1.405e-23
Identity = 61/106 (57.55%), Postives = 73/106 (68.87%), Query Frame = -1

Query:  157 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPHLVERIL 474
            V  RRK D LTDKM +R  TVSA HGDMD  +R II+REF   SSRVLI +DL A GIDV +VSLVIN+DLP+ PENYLHR G      RK  ++ F+    +R+L
Sbjct:  285 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRML 390

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT3G19760.1 (| Symbols: EIF4A-III | eukaryotic initiation factor 4A-III | chr3:6863790-6866242 FORWARD LENGTH=408)

HSP 1 Score: 82.0333 bits (201), Expect = 1.664e-16
Identity = 46/95 (48.42%), Postives = 62/95 (65.26%), Query Frame = -1

Query:  181 RRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFL 465
            +RK D L++KM +   TVS++HGDM    R  I+ EF    SRVLI +D++A GIDV +VSLVINYDLP+  E Y+HR G      RK  ++ F+
Sbjct:  284 KRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 378

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT1G51380.1 (| Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:19047960-19049967 FORWARD LENGTH=392)

HSP 1 Score: 78.1814 bits (191), Expect = 2.402e-15
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = -1

Query:  226 RRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFG 465
            R+K D LT+KM +    VS++HGD     R  I+ +F  + SRVLIASD++A GIDV  VS VINYD+P+ PE Y+HR G
Sbjct:  271 RQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIG 350

[Close]

BLAST of GR410006 vs. TAIR peptide
Match: AT5G63120.2 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:25318967-25322071 REVERSE LENGTH=591)

HSP 1 Score: 58.151 bits (139), Expect = 2.573e-9
Identity = 33/100 (33.00%), Postives = 51/100 (51.00%), Query Frame = -1

Query:  175 VPPRRKFDSLTDKMGNRYRTVSAIHGDMDLISRAIIIREFLFWSSRVLIASDLFACGIDVHRVSLVINYDLPSLPENYLHRFGLFVLSLRKFFSLTFLPH 474
            V  +R  D +T ++        AIHGD     R  ++ EF    S ++ A+D+ A G+DV  +  V+NYD P+  E+Y+HR G    +  K  + TF  H
Sbjct:  417 VETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTH 516

The following BLAST results are available for this feature:

BLAST of GR410006 vs. SwissProt
BLAST of GR410006 vs. TrEMBL
BLAST of GR410006 vs. TAIR peptide

BLAST of GR410006 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF4A9_TOBAC	5.014e-24	60.38	Eukaryotic initiation factor 4A-9 OS=Nicotiana tab...	[more]
IF4A6_TOBAC	6.549e-24	60.38	Eukaryotic initiation factor 4A-6 (Fragment) OS=Ni...	[more]
IF4A_MAIZE	8.553e-24	59.43	Eukaryotic initiation factor 4A OS=Zea mays PE=2 S...	[more]
IF4A3_ORYSJ	8.553e-24	59.43	Eukaryotic initiation factor 4A-3 OS=Oryza sativa ...	[more]
IF411_TOBAC	8.553e-24	60.38	Eukaryotic initiation factor 4A-11 OS=Nicotiana ta...	[more]
IF4A1_ORYSJ	1.117e-23	59.43	Eukaryotic initiation factor 4A-1 OS=Oryza sativa ...	[more]
IF414_TOBAC	1.117e-23	59.43	Eukaryotic initiation factor 4A-14 OS=Nicotiana ta...	[more]
IF410_TOBAC	1.117e-23	59.43	Eukaryotic initiation factor 4A-10 OS=Nicotiana ta...	[more]
IF4A8_TOBAC	1.905e-23	59.43	Eukaryotic initiation factor 4A-8 OS=Nicotiana tab...	[more]
IF4A7_TOBAC	2.488e-23	59.43	Eukaryotic initiation factor 4A-7 OS=Nicotiana tab...	[more]

BLAST of GR410006 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q8H1A5_PEA	3.184e-23	59.81	DEAD box RNA helicase OS=Pisum sativum PE=2 SV=1	[more]
D7L2A1_ARALY	4.158e-23	59.43	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
Q9SYS8_MAIZE	1.210e-22	59.43	Translation initiation factor 4A2 (Fragment) OS=Ze...	[more]
Q6T8C6_HELAN	1.210e-22	58.88	Initiation factor eIF4A-15 OS=Helianthus annuus PE...	[more]
O24558_MAIZE	1.210e-22	59.43	Translation initiation factor OS=Zea mays GN=eIF-4...	[more]
O24449_MAIZE	1.210e-22	59.43	Translational initiation factor eIF-4A OS=Zea mays...	[more]
D2X5K2_PRUPE	1.210e-22	59.43	DEAD-box RNA helicase-like protein OS=Prunus persi...	[more]
C5Z8X0_SORBI	1.210e-22	59.43	Putative uncharacterized protein Sb10g028940 OS=So...	[more]
C5XUM2_SORBI	1.210e-22	59.43	Putative uncharacterized protein Sb04g003390 OS=So...	[more]
C0PHE3_MAIZE	1.210e-22	59.43	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]

BLAST of GR410006 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 10


Match Name	E-value	Identity	Description
AT3G13920.4	2.831e-24	58.49	\| Symbols: EIF4A1 \| eukaryotic translation initiat...	[more]
AT3G13920.3	2.831e-24	58.49	\| Symbols: EIF4A1, RH4, TIF4A1 \| eukaryotic transl...	[more]
AT3G13920.2	2.831e-24	58.49	\| Symbols: EIF4A1, RH4, TIF4A1 \| eukaryotic transl...	[more]
AT3G13920.1	2.831e-24	58.49	\| Symbols: EIF4A1, RH4, TIF4A1 \| eukaryotic transl...	[more]
AT1G72730.1	3.698e-24	57.55	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT1G54270.2	1.405e-23	57.55	\| Symbols: EIF4A-2 \| eif4a-2 \| chr1:20260495-20262...	[more]
AT1G54270.1	1.405e-23	57.55	\| Symbols: EIF4A-2 \| eif4a-2 \| chr1:20260495-20262...	[more]
AT3G19760.1	1.664e-16	48.42	\| Symbols: EIF4A-III \| eukaryotic initiation facto...	[more]
AT1G51380.1	2.402e-15	52.50	\| Symbols: \| DEA(D/H)-box RNA helicase family pro...	[more]
AT5G63120.2	2.573e-9	33.00	\| Symbols: \| P-loop containing nucleoside triphos...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 20..83 score: 7.2
IPR001650	Helicase, C-terminal	SMART	SM00490	no description	coord: 8..83 score: 4.6
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 1..114 score: 11
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 2..83 score: 1.5
None	No IPR available	PANTHER	PTHR10967	DEAD BOX ATP-DEPENDENT RNA HELICASE	coord: 4..83 score: 2.4
None	No IPR available	PANTHER	PTHR10967:SF2	EUKARYOTIC INITIATION FACTOR 4A	coord: 4..83 score: 2.4
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..83 score: 4.5
None	No IPR available	SEG	seg	seg	coord: 54..69 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR410006 ID=GR410006; Name=GR410006; organism=Cicer arietinum; type=EST; length=474bp
ATTTAAAATATATGTTTTAAATGGTGTAATTTTTTATAAAATTAATAAAA
AAATTAATTTTCCTAAAAAAAGAAGGAAGAAGAAACTAATGACAGAAGTT
GGAAAAATATGAAGGTAGATAAACAATTATCATTTTGTAGAACTACAGGA
GACACCCAGGATTCTTTCAACGAGATGAGGGAGAAAGGTGAGGGAAAAAA
ATTTCCTAAGAGAGAGTACAAAAAGACCAAAACGATGAAGATAGTTCTCG
GGAAGAGATGGGAGATCATAATTTATAACTAATGACACTCGATGCACGTC
AATACCACAAGCAAAAAGATCAGAAGCTATTAAAACACGGGAAGACCAAA
AGAGGAATTCACGAATAATAATGGCCCTAGAGATCAGGTCCATGTCCCCA
TGAATTGCTGAGACTGTGCGATAACGGTTTCCCATCTTGTCAGTGAGAGA
ATCAAACTTCCGTCTGGGGGGCAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C

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