HO066640

EST Overview
NameHO066640
Unique NameHO066640
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length299
Libraries
Library NameType
LIBEST_026413 Chickpea drought stressed cDNA SSH library AS2cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of HO066640 vs. TrEMBL
Match: A9PFD6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.687e-8
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = -2
Query:  134 PGRYAGTKQTTPKNRDSKPKEE---KRKQVETPKEVRKLFGGLFKQETIYIDDD 286
            P + A  KQ +PK R  KPKEE   K K+ E+  EVRK+FGGLF+QETIYIDDD
Sbjct:  460 PVQKAVVKQPSPKPRALKPKEEPKPKAKETESKAEVRKVFGGLFQQETIYIDDD 513          
BLAST of HO066640 vs. TrEMBL
Match: B9HPC8_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_723209 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.093e-7
Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = -2
Query:  134 PGRYAGTKQTTPKNRDSKPKEE---KRKQVETPKEVRKLFGGLFKQETIYIDDD 286
            P + A  KQ +PK    KPKEE   K K+ E+  EVRK+FGGLF+QETIYIDDD
Sbjct:  269 PVQKAVVKQPSPKPLALKPKEEPKPKAKETESKAEVRKVFGGLFQQETIYIDDD 322          
BLAST of HO066640 vs. TrEMBL
Match: D7LN50_ARALY (PTAC16 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485048 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.865e-7
Identity = 31/51 (60.78%), Postives = 37/51 (72.55%), Query Frame = -2
Query:  134 PGRYAGTKQTTPKNRDSKPKEEKRKQVETPKEVRKLFGGLFKQETIYIDDD 286
            P + A  KQ       SKPKEE++K+ E  KEVRK+FGGLFKQETIY+DDD
Sbjct:  462 PPKKAVVKQRPSSPFASKPKEERQKKPE--KEVRKVFGGLFKQETIYVDDD 510          
BLAST of HO066640 vs. TrEMBL
Match: Q9STF2_ARATH (Putative uncharacterized protein T6H20.190 OS=Arabidopsis thaliana GN=T6H20.190 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.181e-7
Identity = 32/51 (62.75%), Postives = 36/51 (70.59%), Query Frame = -2
Query:  134 PGRYAGTKQTTPKNRDSKPKEEKRKQVETPKEVRKLFGGLFKQETIYIDDD 286
            P + A  KQ       SKPKEE+ K+ E  KEVRK+FGGLFKQETIYIDDD
Sbjct:  462 PPKKAVVKQRPSSPFASKPKEERPKKPE--KEVRKVFGGLFKQETIYIDDD 510          
BLAST of HO066640 vs. TrEMBL
Match: B9S3E7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0733140 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 9.255e-7
Identity = 29/58 (50.00%), Postives = 38/58 (65.52%), Query Frame = -2
Query:  134 PGRYAGTKQTTPKNRDSKPKEE-------KRKQVETPKEVRKLFGGLFKQETIYIDDD 286
            PG+ A  K+ TP+    K KEE       K K+ E+  EV+K+FGGLF+QETIY+DDD
Sbjct:  456 PGQKAVVKRPTPRFPSLKQKEETKAKPKPKAKETESKAEVKKMFGGLFQQETIYVDDD 513          
BLAST of HO066640 vs. TAIR peptide
Match: AT3G46780.1 (| Symbols: PTAC16 | plastid transcriptionally active 16 | chr3:17228766-17231021 FORWARD LENGTH=510)

HSP 1 Score: 58.151 bits (139), Expect = 1.254e-9
Identity = 32/51 (62.75%), Postives = 36/51 (70.59%), Query Frame = -2
Query:  134 PGRYAGTKQTTPKNRDSKPKEEKRKQVETPKEVRKLFGGLFKQETIYIDDD 286
            P + A  KQ       SKPKEE+ K+ E  KEVRK+FGGLFKQETIYIDDD
Sbjct:  462 PPKKAVVKQRPSSPFASKPKEERPKKPE--KEVRKVFGGLFKQETIYIDDD 510          
The following BLAST results are available for this feature:
BLAST of HO066640 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 5
Match NameE-valueIdentityDescription
A9PFD6_POPTR1.687e-861.11Putative uncharacterized protein OS=Populus tricho... [more]
B9HPC8_POPTR1.093e-759.26Predicted protein (Fragment) OS=Populus trichocarp... [more]
D7LN50_ARALY1.865e-760.78PTAC16 OS=Arabidopsis lyrata subsp. lyrata GN=ARAL... [more]
Q9STF2_ARATH3.181e-762.75Putative uncharacterized protein T6H20.190 OS=Arab... [more]
B9S3E7_RICCO9.255e-750.00Putative uncharacterized protein OS=Ricinus commun... [more]
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BLAST of HO066640 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G46780.11.254e-962.75| Symbols: PTAC16 | plastid transcriptionally acti... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 21..40
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>HO066640 ID=HO066640; Name=HO066640; organism=Cicer arietinum; type=EST; length=299bp
TAGCGTGGTCGCGGCCGAGGTACAATTACATAAATATTTTACTAAATCAT
ACACGTCCAGCCAAATTACCAACGTTAACACAGACTCAAACAACACAGTT
TTAATCTGTGCAAGACACATTCCACTTCCACTAGTCATCATCAATATAGA
TAGTCTCTTGCTTAAACAGACCACCAAATAACTTCCTAACCTCCTTTGGT
GTCTCTACTTGTTTTCTTTTTTCCTCCTTTGGTTTACTGTCTCTGTTTTT
TGGAGTTGTTTGTTTAGTCCCCGCGTACCTGCCCGGGCGGCCGCTCGAA
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