FE672925

EST Overview


Name	FE672925
Unique Name	FE672925
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	203

Libraries


Library Name	Type
LIBEST_022820 Drought-stressed chickpea leave library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of FE672925 vs. SwissProt
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.933e-14
Identity = 37/66 (56.06%), Postives = 43/66 (65.15%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R   DW  PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  152 ADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDE 217

[Close]

BLAST of FE672925 vs. SwissProt
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.623e-14
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R   DW  PGS G++YF           +PAY  GP FNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDE 215

[Close]

BLAST of FE672925 vs. TrEMBL
Match: Q9SY97_ARATH (PSI type III chlorophyll a/b-binding protein OS=Arabidopsis thaliana GN=At1g61520/T25B24.12 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.115e-15
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 215

[Close]

BLAST of FE672925 vs. TrEMBL
Match: Q8LCR7_ARATH (PSI type III chlorophyll a/b-binding protein, putative OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.115e-15
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 215

[Close]

BLAST of FE672925 vs. TrEMBL
Match: Q43381_ARATH (PSI type III chlorophyll a/b-binding protein OS=Arabidopsis thaliana GN=Lhca3*1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.115e-15
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 215

[Close]

BLAST of FE672925 vs. TrEMBL
Match: Q2V2R9_ARATH (Uncharacterized protein At1g61520.2 OS=Arabidopsis thaliana GN=At1g61520 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.115e-15
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:   95 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 160

[Close]

BLAST of FE672925 vs. TrEMBL
Match: Q0WR83_ARATH (PSI type III chlorophyll a/b-binding protein OS=Arabidopsis thaliana GN=At1g61520 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.115e-15
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 215

[Close]

BLAST of FE672925 vs. TrEMBL
Match: D7KVK2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_475174 PE=4 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.115e-15
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 215

[Close]

BLAST of FE672925 vs. TrEMBL
Match: Q9M538_ALOME (Chlorophyll a/b-binding protein type III (Fragment) OS=Alonsoa meridionalis PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.136e-12
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A  Y+LFVLEMALM FA+ R   DW  PGS G++YF           +PAY  GPFFNPLG+GKD+
Sbjct:   79 ADGYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDE 144

[Close]

BLAST of FE672925 vs. TrEMBL
Match: C6TLW5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.136e-12
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A +Y+LFV EMALM FA+ R   DW  PGS G++YF           EPAY  GPFFNPLG+GKD+
Sbjct:  153 ADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDE 218

[Close]

BLAST of FE672925 vs. TrEMBL
Match: C6TEX2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.136e-12
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A +Y+LFV EMALM FA+ R   DW  PGS G++YF           EPAY  GPFFNPLG+GKD+
Sbjct:  153 ADSYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDE 218

[Close]

BLAST of FE672925 vs. TrEMBL
Match: A9PE75_POPTR (Light-harvesting complex I protein Lhca3 OS=Populus trichocarpa GN=Lhca3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.305e-12
Identity = 35/63 (55.56%), Postives = 41/63 (65.08%), Query Frame = 3

Query:   15 YSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            Y+LFV EMALM FA+ R L DW  PGS G++YF           EPAY  GP FNPLG+GKD+
Sbjct:  154 YTLFVFEMALMGFAEHRRLQDWAKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDE 216

[Close]

BLAST of FE672925 vs. TAIR peptide
Match: AT1G61520.3 (| Symbols: LHCA3 | photosystem I light harvesting complex gene 3 | chr1:22700152-22701149 FORWARD LENGTH=273)

HSP 1 Score: 83.5741 bits (205), Expect = 2.831e-17
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 215

[Close]

BLAST of FE672925 vs. TAIR peptide
Match: AT1G61520.2 (| Symbols: LHCA3 | photosystem I light harvesting complex gene 3 | chr1:22700493-22701149 FORWARD LENGTH=218)

HSP 1 Score: 83.5741 bits (205), Expect = 2.831e-17
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:   95 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 160

[Close]

BLAST of FE672925 vs. TAIR peptide
Match: AT1G61520.1 (| Symbols: LHCA3 | photosystem I light harvesting complex gene 3 | chr1:22700152-22701149 FORWARD LENGTH=273)

HSP 1 Score: 83.5741 bits (205), Expect = 2.831e-17
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = 3

Query:    6 AYNYSLFVLEMALMRFAQPRTLLDWYHPGSRGERYFXXXXXXXXXXXEPAYAVGPFFNPLGYGKDD 203
            A NY+LFVLEMALM FA+ R L DWY+PGS G++YF            PAY  GPFFNPLG+GKD+
Sbjct:  150 ADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDE 215

The following BLAST results are available for this feature:

BLAST of FE672925 vs. SwissProt
BLAST of FE672925 vs. TrEMBL
BLAST of FE672925 vs. TAIR peptide

BLAST of FE672925 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
CB23_PEA	1.933e-14	56.06	Chlorophyll a-b binding protein 3, chloroplastic O...	[more]
CB13_SOLLC	5.623e-14	54.55	Chlorophyll a-b binding protein 8, chloroplastic O...	[more]

BLAST of FE672925 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q9SY97_ARATH	7.115e-15	59.09	PSI type III chlorophyll a/b-binding protein OS=Ar...	[more]
Q8LCR7_ARATH	7.115e-15	59.09	PSI type III chlorophyll a/b-binding protein, puta...	[more]
Q43381_ARATH	7.115e-15	59.09	PSI type III chlorophyll a/b-binding protein OS=Ar...	[more]
Q2V2R9_ARATH	7.115e-15	59.09	Uncharacterized protein At1g61520.2 OS=Arabidopsis...	[more]
Q0WR83_ARATH	7.115e-15	59.09	PSI type III chlorophyll a/b-binding protein OS=Ar...	[more]
D7KVK2_ARALY	7.115e-15	59.09	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
Q9M538_ALOME	1.136e-12	54.55	Chlorophyll a/b-binding protein type III (Fragment...	[more]
C6TLW5_SOYBN	1.136e-12	54.55	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6TEX2_SOYBN	1.136e-12	54.55	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PE75_POPTR	3.305e-12	55.56	Light-harvesting complex I protein Lhca3 OS=Populu...	[more]

BLAST of FE672925 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G61520.3	2.831e-17	59.09	\| Symbols: LHCA3 \| photosystem I light harvesting ...	[more]
AT1G61520.2	2.831e-17	59.09	\| Symbols: LHCA3 \| photosystem I light harvesting ...	[more]
AT1G61520.1	2.831e-17	59.09	\| Symbols: LHCA3 \| photosystem I light harvesting ...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 4..66 score: 4.3
None	No IPR available	SEG	seg	seg	coord: 38..48 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FE672925 ID=FE672925; Name=FE672925; organism=Cicer arietinum; type=EST; length=203bp
CTGCGGCATACAATTACTCACTGTTTGTGTTGGAAATGGCTCTCATGCGA
TTTGCACAACCCAGGACACTCCTTGATTGGTACCACCCCGGGTCAAGAGG
AGAACGCTACTTTTTAGGACTTAAGAAAGGTCTTGGTGGTTCAGGTGAAC
CAGCTTACGCTGTTGGACCTTTCTTTAACCCTCTTGGTTATGGTAAGGAT
GAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln

Search form