GR407714

EST Overview


Name	GR407714
Unique Name	GR407714
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	334

Libraries


Library Name	Type
LIBEST_024786 JG11 Salinity-stressed chickpea root cDNA library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR407714 vs. SwissProt
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.824e-11
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RI+SV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIRSVQELSG 36

[Close]

BLAST of GR407714 vs. SwissProt
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.213e-10
Identity = 30/36 (83.33%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELSG 36

[Close]

BLAST of GR407714 vs. SwissProt
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 2.891e-10
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVEELSG 36

[Close]

BLAST of GR407714 vs. SwissProt
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.447e-9
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA++  RI+S  ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADDTARIRSAEELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: Q6YBV3_POPTM (Cellulose synthase OS=Populus tremuloides GN=CesA7 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.122e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVKELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: Q6J8W8_9ROSI (Cellulose synthase OS=Populus tremula x Populus tremuloides GN=CesA4 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.122e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVKELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: B9H5M9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa GN=POPTRDRAFT_760228 PE=4 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.122e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVKELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: B9HGD0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_819877 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.384e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVQELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: B9HGC9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_819877 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.384e-10
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RIKSV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIKSVQELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: D7MSJ2_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_496689 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.199e-9
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RI+SV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIRSVQELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: D7MGE1_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_490712 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.558e-9
Identity = 30/36 (83.33%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: D7M282_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908936 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.953e-9
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVEELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: D7LBY5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_900606 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.953e-9
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+E  RI+SV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADETARIRSVQELSG 36

[Close]

BLAST of GR407714 vs. TrEMBL
Match: D7SWA6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022285001 PE=4 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 5.039e-8
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M TGGRL+AGSH+RNEFVLINA++  RIKSVRELSG
Sbjct:    1 MATGGRLVAGSHHRNEFVLINADDIARIKSVRELSG 36

[Close]

BLAST of GR407714 vs. TAIR peptide
Match: AT5G64740.1 (| Symbols: CESA6, IXR2, E112, PRC1 | cellulose synthase 6 | chr5:25881555-25886333 FORWARD LENGTH=1084)

HSP 1 Score: 66.2402 bits (160), Expect = 4.619e-12
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+EN RI+SV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADENARIRSVQELSG 36

[Close]

BLAST of GR407714 vs. TAIR peptide
Match: AT4G39350.1 (| Symbols: CESA2, ATH-A, ATCESA2 | cellulose synthase A2 | chr4:18297078-18301890 FORWARD LENGTH=1084)

HSP 1 Score: 64.3142 bits (155), Expect = 1.755e-11
Identity = 30/36 (83.33%), Postives = 35/36 (97.22%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV+ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVQELSG 36

[Close]

BLAST of GR407714 vs. TAIR peptide
Match: AT5G09870.1 (| Symbols: CESA5 | cellulose synthase 5 | chr5:3073356-3077974 FORWARD LENGTH=1069)

HSP 1 Score: 63.929 bits (154), Expect = 2.292e-11
Identity = 30/36 (83.33%), Postives = 34/36 (94.44%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA+E+ RI+SV ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADESARIRSVEELSG 36

[Close]

BLAST of GR407714 vs. TAIR peptide
Match: AT2G21770.1 (| Symbols: CESA9, CESA09 | cellulose synthase A9 | chr2:9284837-9289495 FORWARD LENGTH=1088)

HSP 1 Score: 60.8474 bits (146), Expect = 1.941e-10
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 3

Query:  225 MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSG 332
            M+TGGRLIAGSHNRNEFVLINA++  RI+S  ELSG
Sbjct:    1 MNTGGRLIAGSHNRNEFVLINADDTARIRSAEELSG 36

The following BLAST results are available for this feature:

BLAST of GR407714 vs. SwissProt
BLAST of GR407714 vs. TrEMBL
BLAST of GR407714 vs. TAIR peptide

BLAST of GR407714 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
CESA6_ARATH	5.824e-11	86.11	Cellulose synthase A catalytic subunit 6 [UDP-form...	[more]
CESA2_ARATH	2.213e-10	83.33	Cellulose synthase A catalytic subunit 2 [UDP-form...	[more]
CESA5_ARATH	2.891e-10	83.33	Cellulose synthase A catalytic subunit 5 [UDP-form...	[more]
CESA9_ARATH	2.447e-9	77.78	Probable cellulose synthase A catalytic subunit 9 ...	[more]

BLAST of GR407714 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q6YBV3_POPTM	4.122e-10	88.89	Cellulose synthase OS=Populus tremuloides GN=CesA7...	[more]
Q6J8W8_9ROSI	4.122e-10	88.89	Cellulose synthase OS=Populus tremula x Populus tr...	[more]
B9H5M9_POPTR	4.122e-10	88.89	Putative uncharacterized protein OS=Populus tricho...	[more]
B9HGD0_POPTR	5.384e-10	88.89	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9HGC9_POPTR	5.384e-10	88.89	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7MSJ2_ARALY	1.199e-9	86.11	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7MGE1_ARALY	4.558e-9	83.33	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7M282_ARALY	5.953e-9	83.33	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7LBY5_ARALY	5.953e-9	83.33	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
D7SWA6_VITVI	5.039e-8	80.56	Whole genome shotgun sequence of line PN40024, sca...	[more]

BLAST of GR407714 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT5G64740.1	4.619e-12	86.11	\| Symbols: CESA6, IXR2, E112, PRC1 \| cellulose syn...	[more]
AT4G39350.1	1.755e-11	83.33	\| Symbols: CESA2, ATH-A, ATCESA2 \| cellulose synth...	[more]
AT5G09870.1	2.292e-11	83.33	\| Symbols: CESA5 \| cellulose synthase 5 \| chr5:307...	[more]
AT2G21770.1	1.941e-10	77.78	\| Symbols: CESA9, CESA09 \| cellulose synthase A9 \|...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 7..31 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR407714 ID=GR407714; Name=GR407714; organism=Cicer arietinum; type=EST; length=334bp
TTTTTCCTTCTACCCCTCCAAAAAAAAATTGAATTTTTTTCGCTTCAATT
ATCAATTACAAAAGGGTTCATCTTCGATCCGTTAATGGGTTTTTGTTCAC
CAATGCAAAAGTGGATCTTTATGTGAAAAAAAAACAAGATAGTGTTGTTG
TTTTGATTTTGAAGAAGAAAGAGTAGTTTGAAGTAGAAGACCAAGTAGAA
GATTTGTTGTTGTGAGTGTCAGTGATGCATACCGGTGGTAGACTCATTGC
TGGTTCTCACAACAGGAACGAGTTTGTTCTCATCAATGCTGAAGAAAATG
GAAGGATTAAGTCCGTCCGAGAATTGAGTGGACA

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