GR916508

EST Overview


Name	GR916508
Unique Name	GR916508
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	324

Libraries


Library Name	Type
LIBEST_024969 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. WR-315) wilt	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28
InterProScan analysis for Cicer arietinum unigene v1	2010-12-29

Homology

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL1_EMENI (Dynein light chain, cytoplasmic OS=Emericella nidulans GN=nudG PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.225e-16
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHC+VGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   58 TWHCVVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 94

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL2_RAT (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL2_MOUSE (Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL2_HUMAN (Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL2_BOVIN (Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL1_RAT (Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL1_RABIT (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL1_MOUSE (Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL1_MACFA (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. SwissProt
Match: DYL1_HUMAN (Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.824e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHETKHFIYFYLG  AILLFK+
Sbjct:   53 TWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of GR916508 vs. TrEMBL
Match: A7ELJ7_SCLS1 (Dynein light chain, cytoplasmic OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_06194 PE=4 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.430e-15
Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = -3

Query:  194 RPRSWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 313
            R  +WHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   57 RGPTWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 96

[Close]

BLAST of GR916508 vs. TrEMBL
Match: D1ZN40_SORMA (Whole genome shotgun sequence assembly, scaffold_63 OS=Sordaria macrospora GN=SMAC_05752 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.868e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   66 TWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 102

[Close]

BLAST of GR916508 vs. TrEMBL
Match: C9SH65_VERA1 (Dynein light chain OS=Verticillium albo-atrum (strain VaMs.102) GN=VDBG_03768 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.868e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   55 TWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 91

[Close]

BLAST of GR916508 vs. TrEMBL
Match: C5P0S5_COCP7 (Dynein light chain, cytoplasmic, putative OS=Coccidioides posadasii (strain C735) GN=CPC735_069650 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.868e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   62 TWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 98

[Close]

BLAST of GR916508 vs. TrEMBL
Match: C5FFQ5_NANOT (Dynein light chain OS=Nannizzia otae (strain CBS 113480) GN=MCYG_02409 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.868e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   62 TWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 98

[Close]

BLAST of GR916508 vs. TrEMBL
Match: B8MH06_TALSN (Dynein light chain type 1, putative OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_018860 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.868e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   58 TWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 94

[Close]

BLAST of GR916508 vs. TrEMBL
Match: B2W561_PYRTR (Dynein light chain type 1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=PTRG_04761 PE=4 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.868e-15
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   60 TWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 96

[Close]

BLAST of GR916508 vs. TrEMBL
Match: Q4WJT6_ASPFU (Dynein light chain type 1, putative OS=Aspergillus fumigatus GN=AFUA_1G04850 PE=4 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 2.439e-15
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHC+VGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   58 TWHCVVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 94

[Close]

BLAST of GR916508 vs. TrEMBL
Match: Q0CUK7_ASPTN (Dynein light chain OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_02627 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.439e-15
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHC+VGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   60 TWHCVVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 96

[Close]

BLAST of GR916508 vs. TrEMBL
Match: C8VTG5_EMENI (Dynein light chain, cytoplasmic (8 kDa cytoplasmic dynein light chain) [Source:UniProtKB/Swiss-Prot;Acc:O94111] OS=Aspergillus nidulans FGSC A4 GN=nudG PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.439e-15
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHC+VGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ
Sbjct:   58 TWHCVVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 94

[Close]

BLAST of GR916508 vs. TAIR peptide
Match: AT4G15930.1 (| Symbols: | Dynein light chain type 1 family protein | chr4:9036344-9037825 FORWARD LENGTH=123)

HSP 1 Score: 67.781 bits (164), Expect = 1.602e-12
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVGRNFGS+VTHET HF+YFYL   A+LLFK+
Sbjct:   87 TWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKS 122

[Close]

BLAST of GR916508 vs. TAIR peptide
Match: AT5G20110.1 (| Symbols: | Dynein light chain type 1 family protein | chr5:6791542-6793253 REVERSE LENGTH=209)

HSP 1 Score: 53.9138 bits (128), Expect = 2.394e-8
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = -3

Query:  194 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKTQ 304
            +WHCIVG +FGSFVTH T  FIYF +    +LLFKT+
Sbjct:  166 AWHCIVGSSFGSFVTHSTGCFIYFSMDKLYVLLFKTK 202

[Close]

BLAST of GR916508 vs. TAIR peptide
Match: AT1G23220.1 (| Symbols: | Dynein light chain type 1 family protein | chr1:8242614-8244136 FORWARD LENGTH=129)

HSP 1 Score: 52.373 bits (124), Expect = 6.965e-8
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = -3

Query:  197 SWHCIVGRNFGSFVTHETKHFIYFYLGHCAILLFKT 304
            +WHCIVG +FGS+VTH T  F+YF +    +LLFKT
Sbjct:   86 AWHCIVGTSFGSYVTHSTGGFLYFQIDKVYVLLFKT 121

The following BLAST results are available for this feature:

BLAST of GR916508 vs. SwissProt
BLAST of GR916508 vs. TrEMBL
BLAST of GR916508 vs. TAIR peptide

BLAST of GR916508 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
DYL1_EMENI	1.225e-16	94.59	Dynein light chain, cytoplasmic OS=Emericella nidu...	[more]
DYL2_RAT	2.824e-13	86.11	Dynein light chain 2, cytoplasmic OS=Rattus norveg...	[more]
DYL2_MOUSE	2.824e-13	86.11	Dynein light chain 2, cytoplasmic OS=Mus musculus ...	[more]
DYL2_HUMAN	2.824e-13	86.11	Dynein light chain 2, cytoplasmic OS=Homo sapiens ...	[more]
DYL2_BOVIN	2.824e-13	86.11	Dynein light chain 2, cytoplasmic OS=Bos taurus GN...	[more]
DYL1_RAT	2.824e-13	86.11	Dynein light chain 1, cytoplasmic OS=Rattus norveg...	[more]
DYL1_RABIT	2.824e-13	86.11	Dynein light chain 1, cytoplasmic OS=Oryctolagus c...	[more]
DYL1_MOUSE	2.824e-13	86.11	Dynein light chain 1, cytoplasmic OS=Mus musculus ...	[more]
DYL1_MACFA	2.824e-13	86.11	Dynein light chain 1, cytoplasmic OS=Macaca fascic...	[more]
DYL1_HUMAN	2.824e-13	86.11	Dynein light chain 1, cytoplasmic OS=Homo sapiens ...	[more]

BLAST of GR916508 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A7ELJ7_SCLS1	1.430e-15	92.50	Dynein light chain, cytoplasmic OS=Sclerotinia scl...	[more]
D1ZN40_SORMA	1.868e-15	97.30	Whole genome shotgun sequence assembly, scaffold_6...	[more]
C9SH65_VERA1	1.868e-15	97.30	Dynein light chain OS=Verticillium albo-atrum (str...	[more]
C5P0S5_COCP7	1.868e-15	97.30	Dynein light chain, cytoplasmic, putative OS=Cocci...	[more]
C5FFQ5_NANOT	1.868e-15	97.30	Dynein light chain OS=Nannizzia otae (strain CBS 1...	[more]
B8MH06_TALSN	1.868e-15	97.30	Dynein light chain type 1, putative OS=Talaromyces...	[more]
B2W561_PYRTR	1.868e-15	97.30	Dynein light chain type 1 OS=Pyrenophora tritici-r...	[more]
Q4WJT6_ASPFU	2.439e-15	94.59	Dynein light chain type 1, putative OS=Aspergillus...	[more]
Q0CUK7_ASPTN	2.439e-15	94.59	Dynein light chain OS=Aspergillus terreus (strain ...	[more]
C8VTG5_EMENI	2.439e-15	94.59	Dynein light chain, cytoplasmic (8 kDa cytoplasmic...	[more]

BLAST of GR916508 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G15930.1	1.602e-12	75.00	\| Symbols: \| Dynein light chain type 1 family pro...	[more]
AT5G20110.1	2.394e-8	62.16	\| Symbols: \| Dynein light chain type 1 family pro...	[more]
AT1G23220.1	6.965e-8	58.33	\| Symbols: \| Dynein light chain type 1 family pro...	[more]

InterPro

Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 26..46 score
None	No IPR available	SEG	seg	seg	coord: 11..25 score
None	No IPR available	SEG	seg	seg	coord: 70..81 score
None	No IPR available	SEG	seg	seg	coord: 75..90 score

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GR916508 ID=GR916508; Name=GR916508; organism=Cicer arietinum; type=EST; length=324bp
GGCGGGCCGCCCGGGCAGGTACATAGAGGCAGATCCAGCAGGGTAGGGTG
GACGATACAGCAGTCAGCAGCCATCGTGTTGCCTCGCTGCCTTTTGCTTT
TGTCTTTGCCTTCTTGTCCTACCACACCCGTCCCTCTCGCTACAGCAAGC
TCTTCCAAAGGCCCCCACCGGTGAGCCATTTCTCCCATGCCTATTGCGTT
TTGAATAGTAGAATTGCGCAGTGGCCGAGGTAAAAGTAGATAAAGTGCTT
GGTCTCGTGGGTAACGAAGCTACCGAAATTTCGGCCAACAATGCAGTGCC
AGGACCTCGGCCGCGACCACGCTA

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