GR393089
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR393089 vs. TrEMBL
Match: B9HBS4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560046 PE=4 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.101e-18 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = -2 Query: 2 SLKRESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 211 S++ +S+YKRRNVA +L+EEER AKL +MQ+ AELHE QRWKR++ AEE DA+EA S LGG+NFLD A Sbjct: 358 SVRYDSNYKRRNVASKLTEEERLAKLREMQVDAELHEEQRWKRLRKAEEDDAREATHTSMLGGRNFLDAA 427
BLAST of GR393089 vs. TrEMBL
Match: B9SGX7_RICCO (Expressed protein, putative OS=Ricinus communis GN=RCOM_0820860 PE=4 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.995e-18 Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = -2 Query: 2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199 +SH+KRR+VAP+LSEEERAAKL +MQ+ AELHE QRWKR++ AEE D +EA +S GG+NFLD A Sbjct: 339 DSHHKRRSVAPKLSEEERAAKLREMQVDAELHEEQRWKRLRKAEEDDVREATHSSISGGRNFLDAA 404
BLAST of GR393089 vs. TrEMBL
Match: D7SNX6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018754001 PE=4 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.488e-15 Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = -2 Query: 8 KRESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLD 205 + ESHY+RRN AP+LSEEERAA+L +MQ+ ELHE QR KR++ AEE DAQEA Q G++FLD Sbjct: 461 RHESHYRRRNTAPKLSEEERAARLREMQMDVELHEEQRRKRLRKAEENDAQEATQAGISQGRDFLD 526
BLAST of GR393089 vs. TrEMBL
Match: Q56ZJ6_ARATH (Putative uncharacterized protein At2g44200 (Fragment) OS=Arabidopsis thaliana GN=At2g44200 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.736e-12 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = -2 Query: 2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199 E +RR +LSEEERAA+L QMQ+ AE+HE QRW R+K A+ETDA EA +N GK+FLD A Sbjct: 51 EYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRWTRLKKADETDAVEADKNKVSTGKSFLDDA 116
BLAST of GR393089 vs. TrEMBL
Match: O64855_ARATH (At2g44200/F6E13.34 OS=Arabidopsis thaliana GN=At2g44200 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.736e-12 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = -2 Query: 2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199 E +RR +LSEEERAA+L QMQ+ AE+HE QRW R+K A+ETDA EA +N GK+FLD A Sbjct: 389 EYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRWTRLKKADETDAVEADKNKVSTGKSFLDDA 454
BLAST of GR393089 vs. TrEMBL
Match: C0PH10_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.012e-8 Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = -2 Query: 8 KRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 187 +RR +SEEER A+L QMQ AE+HE QRWKR+K A + DA+EA V + GKNFL+ Sbjct: 402 RRRGGVHHMSEEERLARLHQMQADAEVHEEQRWKRLKKAADDDAKEATTVNANQFKGKNFLE 463
BLAST of GR393089 vs. TrEMBL
Match: D5AAZ0_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.322e-8 Identity = 29/56 (51.79%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 5 APRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDT 172 A +LSEEE+A +L +MQ+ AE+HE QRW+R+K A + DA+EA + + GK+FLD+ Sbjct: 240 AGKLSEEEKADRLREMQIDAEIHEEQRWQRLKKASDADAREAKEATKGTGKSFLDS 295
BLAST of GR393089 vs. TrEMBL
Match: C5YJ81_SORBI (Putative uncharacterized protein Sb07g028330 OS=Sorghum bicolor GN=Sb07g028330 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.322e-8 Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = -2 Query: 8 KRESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 205 K S +RR +SEEER A+L QM+ AE+HE QRWKR+K A + DA+EA V + GKNFL+ Sbjct: 400 KGPSFNRRRGGVHHMSEEERLARLRQMEADAEVHEEQRWKRLKKAADDDAKEAATVNVNQFKGKNFLE 467
BLAST of GR393089 vs. TrEMBL
Match: Q6ZKL9_ORYSJ (Os08g0500200 protein OS=Oryza sativa subsp. japonica GN=OJ1118_A06.14-1 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.256e-8 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = -2 Query: 8 YKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 190 + RR +SEEER A+L QMQ AE+HE QRW R+K A + DA+EA V + GKNFL+ Sbjct: 411 FNRRRGVQHMSEEEREARLRQMQADAEVHEEQRWSRLKKAADDDAKEAASVNANQFRGKNFLE 473
BLAST of GR393089 vs. TrEMBL
Match: A3BUJ1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_27830 PE=4 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.256e-8 Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = -2 Query: 8 YKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 190 + RR +SEEER A+L QMQ AE+HE QRW R+K A + DA+EA V + GKNFL+ Sbjct: 421 FNRRRGVQHMSEEEREARLRQMQADAEVHEEQRWSRLKKAADDDAKEAASVNANQFRGKNFLE 483
BLAST of GR393089 vs. TAIR peptide
Match: AT2G44200.1 (| Symbols: | CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor | chr2:18276302-18278240 FORWARD LENGTH=493) HSP 1 Score: 73.9442 bits (180), Expect = 2.207e-14 Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = -2 Query: 2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199 E +RR +LSEEERAA+L QMQ+ AE+HE QRW R+K A+ETDA EA +N GK+FLD A Sbjct: 389 EYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRWTRLKKADETDAVEADKNKVSTGKSFLDDA 454 The following BLAST results are available for this feature:
BLAST of GR393089 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR393089 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR393089 ID=GR393089; Name=GR393089; organism=Cicer arietinum; type=EST; length=221bpback to top |