GR393089

EST Overview
NameGR393089
Unique NameGR393089
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length221
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR393089 vs. TrEMBL
Match: B9HBS4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_560046 PE=4 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.101e-18
Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = -2
Query:    2 SLKRESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 211
            S++ +S+YKRRNVA +L+EEER AKL +MQ+ AELHE QRWKR++ AEE DA+EA   S LGG+NFLD A
Sbjct:  358 SVRYDSNYKRRNVASKLTEEERLAKLREMQVDAELHEEQRWKRLRKAEEDDAREATHTSMLGGRNFLDAA 427          
BLAST of GR393089 vs. TrEMBL
Match: B9SGX7_RICCO (Expressed protein, putative OS=Ricinus communis GN=RCOM_0820860 PE=4 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.995e-18
Identity = 44/66 (66.67%), Postives = 55/66 (83.33%), Query Frame = -2
Query:    2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199
            +SH+KRR+VAP+LSEEERAAKL +MQ+ AELHE QRWKR++ AEE D +EA  +S  GG+NFLD A
Sbjct:  339 DSHHKRRSVAPKLSEEERAAKLREMQVDAELHEEQRWKRLRKAEEDDVREATHSSISGGRNFLDAA 404          
BLAST of GR393089 vs. TrEMBL
Match: D7SNX6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_23.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018754001 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.488e-15
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = -2
Query:    8 KRESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLD 205
            + ESHY+RRN AP+LSEEERAA+L +MQ+  ELHE QR KR++ AEE DAQEA Q     G++FLD
Sbjct:  461 RHESHYRRRNTAPKLSEEERAARLREMQMDVELHEEQRRKRLRKAEENDAQEATQAGISQGRDFLD 526          
BLAST of GR393089 vs. TrEMBL
Match: Q56ZJ6_ARATH (Putative uncharacterized protein At2g44200 (Fragment) OS=Arabidopsis thaliana GN=At2g44200 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.736e-12
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = -2
Query:    2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199
            E   +RR    +LSEEERAA+L QMQ+ AE+HE QRW R+K A+ETDA EA +N    GK+FLD A
Sbjct:   51 EYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRWTRLKKADETDAVEADKNKVSTGKSFLDDA 116          
BLAST of GR393089 vs. TrEMBL
Match: O64855_ARATH (At2g44200/F6E13.34 OS=Arabidopsis thaliana GN=At2g44200 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.736e-12
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = -2
Query:    2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199
            E   +RR    +LSEEERAA+L QMQ+ AE+HE QRW R+K A+ETDA EA +N    GK+FLD A
Sbjct:  389 EYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRWTRLKKADETDAVEADKNKVSTGKSFLDDA 454          
BLAST of GR393089 vs. TrEMBL
Match: C0PH10_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.012e-8
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = -2
Query:    8 KRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 187
            +RR     +SEEER A+L QMQ  AE+HE QRWKR+K A + DA+EA  V  +   GKNFL+
Sbjct:  402 RRRGGVHHMSEEERLARLHQMQADAEVHEEQRWKRLKKAADDDAKEATTVNANQFKGKNFLE 463          
BLAST of GR393089 vs. TrEMBL
Match: D5AAZ0_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.322e-8
Identity = 29/56 (51.79%), Postives = 43/56 (76.79%), Query Frame = -2
Query:    5 APRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDT 172
            A +LSEEE+A +L +MQ+ AE+HE QRW+R+K A + DA+EA + +   GK+FLD+
Sbjct:  240 AGKLSEEEKADRLREMQIDAEIHEEQRWQRLKKASDADAREAKEATKGTGKSFLDS 295          
BLAST of GR393089 vs. TrEMBL
Match: C5YJ81_SORBI (Putative uncharacterized protein Sb07g028330 OS=Sorghum bicolor GN=Sb07g028330 PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.322e-8
Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = -2
Query:    8 KRESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 205
            K  S  +RR     +SEEER A+L QM+  AE+HE QRWKR+K A + DA+EA  V  +   GKNFL+
Sbjct:  400 KGPSFNRRRGGVHHMSEEERLARLRQMEADAEVHEEQRWKRLKKAADDDAKEAATVNVNQFKGKNFLE 467          
BLAST of GR393089 vs. TrEMBL
Match: Q6ZKL9_ORYSJ (Os08g0500200 protein OS=Oryza sativa subsp. japonica GN=OJ1118_A06.14-1 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.256e-8
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = -2
Query:    8 YKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 190
            + RR     +SEEER A+L QMQ  AE+HE QRW R+K A + DA+EA  V  +   GKNFL+
Sbjct:  411 FNRRRGVQHMSEEEREARLRQMQADAEVHEEQRWSRLKKAADDDAKEAASVNANQFRGKNFLE 473          
BLAST of GR393089 vs. TrEMBL
Match: A3BUJ1_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_27830 PE=4 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 2.256e-8
Identity = 32/63 (50.79%), Postives = 41/63 (65.08%), Query Frame = -2
Query:    8 YKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEA--VQNSNLGGKNFLD 190
            + RR     +SEEER A+L QMQ  AE+HE QRW R+K A + DA+EA  V  +   GKNFL+
Sbjct:  421 FNRRRGVQHMSEEEREARLRQMQADAEVHEEQRWSRLKKAADDDAKEAASVNANQFRGKNFLE 483          
BLAST of GR393089 vs. TAIR peptide
Match: AT2G44200.1 (| Symbols: | CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor | chr2:18276302-18278240 FORWARD LENGTH=493)

HSP 1 Score: 73.9442 bits (180), Expect = 2.207e-14
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = -2
Query:    2 ESHYKRRNVAPRLSEEERAAKLGQMQLAAELHEGQRWKRIKNAEETDAQEAVQNSNLGGKNFLDTA 199
            E   +RR    +LSEEERAA+L QMQ+ AE+HE QRW R+K A+ETDA EA +N    GK+FLD A
Sbjct:  389 EYQNRRRKGGSKLSEEERAARLKQMQMDAEVHEEQRWTRLKKADETDAVEADKNKVSTGKSFLDDA 454          
The following BLAST results are available for this feature:
BLAST of GR393089 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HBS4_POPTR4.101e-1864.29Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SGX7_RICCO6.995e-1866.67Expressed protein, putative OS=Ricinus communis GN... [more]
D7SNX6_VITVI2.488e-1562.12Whole genome shotgun sequence of line PN40024, sca... [more]
Q56ZJ6_ARATH5.736e-1257.58Putative uncharacterized protein At2g44200 (Fragme... [more]
O64855_ARATH5.736e-1257.58At2g44200/F6E13.34 OS=Arabidopsis thaliana GN=At2g... [more]
C0PH10_MAIZE1.012e-853.23Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
D5AAZ0_PICSI1.322e-851.79Putative uncharacterized protein OS=Picea sitchens... [more]
C5YJ81_SORBI1.322e-850.00Putative uncharacterized protein Sb07g028330 OS=So... [more]
Q6ZKL9_ORYSJ2.256e-850.79Os08g0500200 protein OS=Oryza sativa subsp. japoni... [more]
A3BUJ1_ORYSJ2.256e-850.79Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of GR393089 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G44200.12.207e-1457.58| Symbols: | CBF1-interacting co-repressor CIR, N... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 45..57
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR393089 ID=GR393089; Name=GR393089; organism=Cicer arietinum; type=EST; length=221bp
GTGCGGTATCCAAGAAATTCTTTCCACCGAGATTACTGTTCTGGACTGCT
TCCTGTGCGTCAGTCTCCTCAGCGTTCTTTATGCGTTTCCATCTCTGTCC
TTCATGCAACTCGGCAGCAAGTTGCATCTGCCCAAGTTTAGCAGCCCTCT
CTTCTTCTGAAAGCCTAGGAGCCACATTTCTCCGCTTATAGTGTGATTCA
CGTTTGAGTGAAGTAACAAAA
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