GR394945

EST Overview
NameGR394945
Unique NameGR394945
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length513
Libraries
Library NameType
LIBEST_024780 ICC1882 PEG induced drought cDNA librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR394945 vs. TrEMBL
Match: B9HHF3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_868168 PE=4 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.702e-35
Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = -1
Query:  103 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRIFTXXXXXXXXXXXXXXXYLSCKK 513
            K KLLYSLLFQA+FLP  +D + MLKEMDD  MLTLVIQEMSK+FPTLM+TLVHERDQYMSS LL+           VGKGHLQG+KK+W  P  MKDL+ IPS KPA+ A ++                 YLS KK
Sbjct:  154 KVKLLYSLLFQALFLPSSEDLDKMLKEMDDVDMLTLVIQEMSKQFPTLMDTLVHERDQYMSSTLLRIAKEHTSVVAVVGKGHLQGIKKHWGQPFEMKDLMEIPSQKPAVSARKVLASLGVAVAGVAIVSGFYLSRKK 290          
BLAST of GR394945 vs. TrEMBL
Match: D7TEN7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030621001 PE=4 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.070e-32
Identity = 75/137 (54.74%), Postives = 90/137 (65.69%), Query Frame = -1
Query:  103 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRIFTXXXXXXXXXXXXXXXYLSCKK 513
            K KLLY++ FQA FLP  +D N M+KEMD+  MLTLVIQEMSKEFPTLMETLVHERDQ+MSS LL+           VGKGHLQG+KKNW+ P+ +  LL  PS  PA+ A++I T               YL+ KK
Sbjct:  297 KAKLLYTITFQAFFLPSQEDLNKMMKEMDNVDMLTLVIQEMSKEFPTLMETLVHERDQFMSSTLLRVAAKHSSVVAVVGKGHLQGIKKNWQQPIQITSLLEPPSHSPAVSAVKILTSLGAAVAGVAIISGIYLAVKK 433          
BLAST of GR394945 vs. TrEMBL
Match: B9MXX1_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_292460 PE=4 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.183e-31
Identity = 74/137 (54.01%), Postives = 89/137 (64.96%), Query Frame = -1
Query:  103 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRIFTXXXXXXXXXXXXXXXYLSCKK 513
            K K LYSLLFQA+FLP  +D   MLKEMDD  MLTLVIQEMSK+FPTLMETLV ERDQYMSS LL+           VGKGHLQG+K++W+  + +KDL+ +PS K A+ A ++                 YLS KK
Sbjct:  207 KVKFLYSLLFQALFLPSSEDLEKMLKEMDDVDMLTLVIQEMSKQFPTLMETLVQERDQYMSSTLLRIAKEHNSVVAVVGKGHLQGIKRHWEQHIELKDLMELPSQKSAVSAWKVLASLGVAVAGVAIVSGIYLSRKK 343          
BLAST of GR394945 vs. TrEMBL
Match: Q8GXY6_ARATH (At1g05270 OS=Arabidopsis thaliana GN=At1g05270/YUP8H12_12 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.308e-30
Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = -1
Query:  175 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALR 513
            K K LYS+LFQAVFLP  ++   MLK+MD+  M+TLVIQEMSKEFPTLM+T+VHERDQYM+S LL+           +GKGH+ G+KKNWK P+ M DL+ IPS K ++F L+
Sbjct:  235 KVKFLYSILFQAVFLPGAEELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVASDHSSVVAVIGKGHINGIKKNWKQPITMNDLMEIPSDK-SVFTLK 346          
BLAST of GR394945 vs. TrEMBL
Match: D7KED1_ARALY (TraB family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_887709 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.308e-30
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = -1
Query:  166 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRIFT 513
            K K LYS+LFQAVFLP  ++   MLK+MD+  M+TLVIQEMSKEFPTLM+T+VHERDQYM+S LL+           +GKGH+ G+KKNWK P+ M DL+ IPS K      RI +
Sbjct:  236 KVKFLYSILFQAVFLPSAEELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVASEHSSVVAVIGKGHINGIKKNWKQPITMNDLMEIPSDKSVFTIKRIIS 351          
BLAST of GR394945 vs. TrEMBL
Match: B9RPS1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1551210 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.562e-28
Identity = 68/118 (57.63%), Postives = 78/118 (66.10%), Query Frame = -1
Query:  103 DXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRIFTXXXXXXXXXXXXXXXYLSCKK 456
            D    LKEMD+  MLTLVIQEMSKEFPTLMETLVHERDQYMSS LLK           VGKGHLQG+K++W+ PV +KDLL +PS KPAI AL++ T               Y +CKK
Sbjct:  251 DRPVQLKEMDNVDMLTLVIQEMSKEFPTLMETLVHERDQYMSSTLLKVASEHTSVVAVVGKGHLQGIKRHWRQPVPVKDLLEMPSQKPAISALKVLTSLGVAVSGVAIIWGIYRACKK 368          
BLAST of GR394945 vs. TrEMBL
Match: B9FKZ2_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_19083 PE=4 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.144e-27
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = -1
Query:  172 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRI 513
            + K LY ++FQ++FLP  ++ N MLK+M+D  MLTLVIQEMSK FPTLMETL+HERD YMSS LLK           VGKGH+ G+KKNW+ P+ ++ LL +P  K     ++I
Sbjct:  197 RAKFLYYIVFQSIFLPSPEELNKMLKDMEDVDMLTLVIQEMSKAFPTLMETLLHERDMYMSSKLLKVAKEHSSVVAVVGKGHVSGIKKNWEQPIEIESLLVLPVTKQGASKMKI 310          
BLAST of GR394945 vs. TrEMBL
Match: B8AZL1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20492 PE=4 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.144e-27
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = -1
Query:  172 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRI 513
            + K LY ++FQ++FLP  ++ N MLK+M+D  MLTLVIQEMSK FPTLMETL+HERD YMSS LLK           VGKGH+ G+KKNW+ P+ ++ LL +P  K     ++I
Sbjct:  197 RAKFLYYIVFQSIFLPSPEELNKMLKDMEDVDMLTLVIQEMSKAFPTLMETLLHERDMYMSSKLLKVAKEHSSVVAVVGKGHVSGIKKNWEQPIEIESLLVLPVTKQGASKMKI 310          
BLAST of GR394945 vs. TrEMBL
Match: B7FA11_ORYSJ (cDNA, clone: J100029H20, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.144e-27
Identity = 60/114 (52.63%), Postives = 79/114 (69.30%), Query Frame = -1
Query:  172 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALRI 513
            + K LY ++FQ++FLP  ++ N MLK+M+D  MLTLVIQEMSK FPTLMETL+HERD YMSS LLK           VGKGH+ G+KKNW+ P+ ++ LL +P  K     ++I
Sbjct:  258 RAKFLYYIVFQSIFLPSPEELNKMLKDMEDVDMLTLVIQEMSKAFPTLMETLLHERDMYMSSKLLKVAKEHSSVVAVVGKGHVSGIKKNWEQPIEIESLLVLPVTKQGASKMKI 371          
BLAST of GR394945 vs. TrEMBL
Match: D7LEX5_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_344992 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.497e-26
Identity = 62/113 (54.87%), Postives = 82/113 (72.57%), Query Frame = -1
Query:  175 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALR 513
            K KL+YS++ QAVFLP   +   MLK+M D+ MLTLVIQEMSKEFP+LMETLVHERD+YM+  LL+           VG+GHLQG+KKNW  P+ +K+LL +P+   +IF ++
Sbjct:  213 KIKLVYSIVSQAVFLPKPKELEKMLKDMSDADMLTLVIQEMSKEFPSLMETLVHERDKYMAYYLLRLASEHSSVVAVVGRGHLQGIKKNWNQPINIKELLELPT-NESIFTVK 324          
BLAST of GR394945 vs. TAIR peptide
Match: AT1G05270.1 (| Symbols: | TraB family protein | chr1:1531806-1534305 REVERSE LENGTH=371)

HSP 1 Score: 135.961 bits (341), Expect = 1.144e-32
Identity = 66/113 (58.41%), Postives = 84/113 (74.34%), Query Frame = -1
Query:  175 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALR 513
            K K LYS+LFQAVFLP  ++   MLK+MD+  M+TLVIQEMSKEFPTLM+T+VHERDQYM+S LL+           +GKGH+ G+KKNWK P+ M DL+ IPS K ++F L+
Sbjct:  235 KVKFLYSILFQAVFLPGAEELEKMLKDMDNVDMVTLVIQEMSKEFPTLMDTIVHERDQYMASSLLRVASDHSSVVAVIGKGHINGIKKNWKQPITMNDLMEIPSDK-SVFTLK 346          
BLAST of GR394945 vs. TAIR peptide
Match: AT2G32340.1 (| Symbols: | TraB family protein | chr2:13732247-13734361 FORWARD LENGTH=360)

HSP 1 Score: 114.39 bits (285), Expect = 3.564e-26
Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = -1
Query:  175 KTKLLYSLLFQAVFLPXXDDXNXMLKEMDDSXMLTLVIQEMSKEFPTLMETLVHERDQYMSSXLLKXXXXXXXXXXXVGKGHLQGMKKNWKXPVVMKDLLTIPSPKPAIFALR 513
            K KL+YS++ QAVFLP   +   MLK++ D  MLTL IQEMS EFPTLMETLVHERD+YM+  LL+           VG+GHLQG+KKNW   + +K+L+ +P+   +IF ++
Sbjct:  226 KIKLVYSIVSQAVFLPNPKELEKMLKDLGDGDMLTLAIQEMSTEFPTLMETLVHERDKYMAYQLLRIASEHSSVVAVVGRGHLQGIKKNWNQTINIKELMELPT-NESIFTVK 337          
The following BLAST results are available for this feature:
BLAST of GR394945 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B9HHF3_POPTR6.702e-3558.39Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TEN7_VITVI1.070e-3254.74Whole genome shotgun sequence of line PN40024, sca... [more]
B9MXX1_POPTR1.183e-3154.01Predicted protein (Fragment) OS=Populus trichocarp... [more]
Q8GXY6_ARATH1.308e-3058.41At1g05270 OS=Arabidopsis thaliana GN=At1g05270/YUP... [more]
D7KED1_ARALY1.308e-3056.90TraB family protein OS=Arabidopsis lyrata subsp. l... [more]
B9RPS1_RICCO3.562e-2857.63Putative uncharacterized protein OS=Ricinus commun... [more]
B9FKZ2_ORYSJ5.144e-2752.63Putative uncharacterized protein OS=Oryza sativa s... [more]
B8AZL1_ORYSI5.144e-2752.63Putative uncharacterized protein OS=Oryza sativa s... [more]
B7FA11_ORYSJ5.144e-2752.63cDNA, clone: J100029H20, full insert sequence OS=O... [more]
D7LEX5_ARALY1.497e-2654.87Putative uncharacterized protein OS=Arabidopsis ly... [more]
back to top
BLAST of GR394945 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G05270.11.144e-3258.41| Symbols: | TraB family protein | chr1:1531806-1... [more]
AT2G32340.13.564e-2651.33| Symbols: | TraB family protein | chr2:13732247-... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 72..83
score
NoneNo IPR availableSEGsegsegcoord: 12..22
score
NoneNo IPR availableSEGsegsegcoord: 67..78
score: NAcoord: 117..131
score
IPR002816Pheromone shutdown-related, TraBPFAMPF01963TraBcoord: 1..93
score: 6

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR394945 ID=GR394945; Name=GR394945; organism=Cicer arietinum; type=EST; length=513bp
GCTGANGGNATAACTGGACTCAACTTGNATATATTTCAATTCATATACCA
AACGTTCCTGAAGATGACATGATTGCGACAATGTCTCTACCTANAGAAGT
CATTTCTTGCATGAAAGATANATGCCGGATATTATGGCCACCCCAGCTAC
AGCAACACCGGCAGATGTGAAAATTCTCAATGCAAAAATAGCCGGTTTGG
GAGATGGAATTGTTAGGAGATCCTTCATCACGACAGGNTGCTTCCAATTC
TTCTTCATTCCTTGNAGATGCCCCTTTCCAACAACAGCAACAACTGATCT
GCTCTCACTTGCCACCTTTAATAATGNGGAGGACATGTACTGATCTCGTT
CATGGACAAGGGTCTCCATTAAAGTTGGAAATTCCTTACTCATTTCTTGA
ATTACAAGAGTTAGCATGNCACTGTCATCCATTTCCTTCAGCATGNTATT
AANATCATCANANCTGGGTAAAAAGACTGCTTGGAAAAGTAAAGAGTACA
ACAACTTTGTCTT
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR002816TraB/PrgY/GumN_fam