HO067296

EST Overview


Name	HO067296
Unique Name	HO067296
Type	EST
Organism	Cicer arietinum (chickpea)
Sequence length	258

Libraries


Library Name	Type
LIBEST_026414 Chickpea drought stressed cDNA SSH library BULK1	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Cicer arietinum unigene v1	Cicer arietinum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Cicer arietinum unigene v1	2010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide	2011-02-03
Homology Analysis: Cicer arietinum unigene v1 vs Swissprot	2010-12-28
Homology Analysis: Cicer arietinum unigene v1 vs Trembl	2010-12-28

Homology

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_GINBI (Cytochrome c OS=Ginkgo biloba PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 5.336e-9
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATSKE 104
            +YIPGTKMVFPGLKKP+ RADLI+YLK ATS+E
Sbjct:   81 KYIPGTKMVFPGLKKPZZRADLISYLKQATSQE 113

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_WHEAT (Cytochrome c OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 9.101e-9
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK ATS
Sbjct:   81 KYIPGTKMVFPGLKKPQDRADLIAYLKKATS 111

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_FRIAG (Cytochrome c OS=Fritillaria agrestis GN=CYTC PE=3 SV=3)

HSP 1 Score: 58.9214 bits (141), Expect = 9.101e-9
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK ATS
Sbjct:   82 KYIPGTKMVFPGLKKPQDRADLIAYLKEATS 112

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_PASSA (Cytochrome c OS=Pastinaca sativa PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.552e-8
Identity = 26/31 (83.87%), Postives = 30/31 (96.77%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK+AT+
Sbjct:   81 KYIPGTKMVFPGLKKPQDRADLIAYLKHATA 111

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_RICCO (Cytochrome c OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.028e-8
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   81 KYIPGTKMVFPGLKKPQDRADLIAYLKZATA 111

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_CUCMA (Cytochrome c OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.028e-8
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   81 KYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_BRAOL (Cytochrome c OS=Brassica oleracea PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.028e-8
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   81 KYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_BRANA (Cytochrome c OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.028e-8
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   81 KYIPGTKMVFPGLKKPQDRADLIAYLKEATA 111

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_SOLTU (Cytochrome c OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.648e-8
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   81 KYIPGTKMVFPGLKKPQERADLIAYLKEATA 111

[Close]

BLAST of HO067296 vs. SwissProt
Match: CYC_SOLLC (Cytochrome c OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 2.648e-8
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   81 KYIPGTKMVFPGLKKPQERADLIAYLKEATA 111

[Close]

BLAST of HO067296 vs. TrEMBL
Match: A2Q5X9_MEDTR (Cytochrome c, monohaem OS=Medicago truncatula GN=MtrDRAFT_AC171534g21v1 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.314e-8
Identity = 29/33 (87.88%), Postives = 32/33 (96.97%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATSKE 104
            +YIPGTKMVFPGLKKP+ RADLIAYLK+ATSKE
Sbjct:   82 KYIPGTKMVFPGLKKPQERADLIAYLKDATSKE 114

[Close]

BLAST of HO067296 vs. TrEMBL
Match: C5XEM6_SORBI (Putative uncharacterized protein Sb03g042000 OS=Sorghum bicolor GN=Sb03g042000 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.112e-7
Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLKNAT+
Sbjct:   82 KYIPGTKMVFPGLKKPQERADLIAYLKNATA 112

[Close]

BLAST of HO067296 vs. TrEMBL
Match: B6U1Y6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=4 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.453e-7
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNAT 95
            +YIPGTKMVFPGLKKP+ RADLIAYLKNAT
Sbjct:   19 KYIPGTKMVFPGLKKPQERADLIAYLKNAT 48

[Close]

BLAST of HO067296 vs. TrEMBL
Match: B4FYS2_MAIZE (Putative uncharacterized protein OS=Zea mays PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.453e-7
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNAT 95
            +YIPGTKMVFPGLKKP+ RADLIAYLKNAT
Sbjct:   82 KYIPGTKMVFPGLKKPQERADLIAYLKNAT 111

[Close]

BLAST of HO067296 vs. TrEMBL
Match: B9SS73_RICCO (Cytochrome c, putative OS=Ricinus communis GN=RCOM_0618390 PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.226e-7
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   82 KYIPGTKMVFPGLKKPQDRADLIAYLKQATA 112

[Close]

BLAST of HO067296 vs. TrEMBL
Match: B8LQM4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.226e-7
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATSKE 104
            +YIPGTKMVFPGLKKP+ R DLIAYLK ATS +
Sbjct:   82 KYIPGTKMVFPGLKKPQERVDLIAYLKKATSSD 114

[Close]

BLAST of HO067296 vs. TrEMBL
Match: B6T4T7_MAIZE (Cytochrome c OS=Zea mays PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.226e-7
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNAT 95
            +YIPGTKMVFPGLKKP+ R DLIAYLKNAT
Sbjct:   82 KYIPGTKMVFPGLKKPQERVDLIAYLKNAT 111

[Close]

BLAST of HO067296 vs. TrEMBL
Match: B2LXS2_VITVI (Mitochondrial cytochrome c OS=Vitis vinifera GN=VIT_00036385001 PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.226e-7
Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK AT+
Sbjct:   82 KYIPGTKMVFPGLKKPQDRADLIAYLKQATA 112

[Close]

BLAST of HO067296 vs. TrEMBL
Match: A9SRQ9_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_215021 PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.226e-7
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATSK 101
            +YIPGTKMVFPGLKKP+ RADLIAYLK +TS+
Sbjct:   82 KYIPGTKMVFPGLKKPQERADLIAYLKKSTSE 113

[Close]

BLAST of HO067296 vs. TrEMBL
Match: A9SNF0_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_186747 PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 4.226e-7
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATSK 101
            +YIPGTKMVFPGLKKP+ RADLIAYLK +TS+
Sbjct:   82 KYIPGTKMVFPGLKKPQERADLIAYLKKSTSE 113

[Close]

BLAST of HO067296 vs. TAIR peptide
Match: AT1G22840.1 (| Symbols: CYTC-1, ATCYTC-A | CYTOCHROME C-1 | chr1:8079384-8080286 FORWARD LENGTH=114)

HSP 1 Score: 56.6102 bits (135), Expect = 3.662e-9
Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK +T+
Sbjct:   82 KYIPGTKMVFPGLKKPQDRADLIAYLKESTA 112

[Close]

BLAST of HO067296 vs. TAIR peptide
Match: AT4G10040.1 (| Symbols: CYTC-2 | cytochrome c-2 | chr4:6277083-6278281 FORWARD LENGTH=112)

HSP 1 Score: 56.225 bits (134), Expect = 4.783e-9
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 3

Query:    6 RYIPGTKMVFPGLKKPKGRADLIAYLKNATS 98
            +YIPGTKMVFPGLKKP+ RADLIAYLK  T+
Sbjct:   82 KYIPGTKMVFPGLKKPQDRADLIAYLKEGTA 112

The following BLAST results are available for this feature:

BLAST of HO067296 vs. SwissProt
BLAST of HO067296 vs. TrEMBL
BLAST of HO067296 vs. TAIR peptide

BLAST of HO067296 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
CYC_GINBI	5.336e-9	81.82	Cytochrome c OS=Ginkgo biloba PE=1 SV=1	[more]
CYC_WHEAT	9.101e-9	87.10	Cytochrome c OS=Triticum aestivum PE=1 SV=1	[more]
CYC_FRIAG	9.101e-9	87.10	Cytochrome c OS=Fritillaria agrestis GN=CYTC PE=3 ...	[more]
CYC_PASSA	1.552e-8	83.87	Cytochrome c OS=Pastinaca sativa PE=1 SV=1	[more]
CYC_RICCO	2.028e-8	83.87	Cytochrome c OS=Ricinus communis PE=1 SV=1	[more]
CYC_CUCMA	2.028e-8	83.87	Cytochrome c OS=Cucurbita maxima PE=1 SV=1	[more]
CYC_BRAOL	2.028e-8	83.87	Cytochrome c OS=Brassica oleracea PE=1 SV=1	[more]
CYC_BRANA	2.028e-8	83.87	Cytochrome c OS=Brassica napus PE=1 SV=1	[more]
CYC_SOLTU	2.648e-8	83.87	Cytochrome c OS=Solanum tuberosum PE=1 SV=1	[more]
CYC_SOLLC	2.648e-8	83.87	Cytochrome c OS=Solanum lycopersicum PE=1 SV=2	[more]

BLAST of HO067296 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
A2Q5X9_MEDTR	1.314e-8	87.88	Cytochrome c, monohaem OS=Medicago truncatula GN=M...	[more]
C5XEM6_SORBI	1.112e-7	87.10	Putative uncharacterized protein Sb03g042000 OS=So...	[more]
B6U1Y6_MAIZE	1.453e-7	90.00	Putative uncharacterized protein OS=Zea mays PE=4 ...	[more]
B4FYS2_MAIZE	1.453e-7	90.00	Putative uncharacterized protein OS=Zea mays PE=3 ...	[more]
B9SS73_RICCO	4.226e-7	83.87	Cytochrome c, putative OS=Ricinus communis GN=RCOM...	[more]
B8LQM4_PICSI	4.226e-7	78.79	Putative uncharacterized protein OS=Picea sitchens...	[more]
B6T4T7_MAIZE	4.226e-7	86.67	Cytochrome c OS=Zea mays PE=3 SV=1	[more]
B2LXS2_VITVI	4.226e-7	83.87	Mitochondrial cytochrome c OS=Vitis vinifera GN=VI...	[more]
A9SRQ9_PHYPA	4.226e-7	81.25	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
A9SNF0_PHYPA	4.226e-7	81.25	Predicted protein OS=Physcomitrella patens subsp. ...	[more]

BLAST of HO067296 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G22840.1	3.662e-9	80.65	\| Symbols: CYTC-1, ATCYTC-A \| CYTOCHROME C-1 \| chr...	[more]
AT4G10040.1	4.783e-9	80.65	\| Symbols: CYTC-2 \| cytochrome c-2 \| chr4:6277083-...	[more]

Properties


Property Name	Value
Singlet in analysis	Cicer arietinum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO067296 ID=HO067296; Name=HO067296; organism=Cicer arietinum; type=EST; length=258bp
CGGGCAGGTACATCCCAGGGACAAAGATGGTATTTCCTGGTCTTAAGAAG
CCCAAGGGACGTGCTGATCTTATTGCATATCTGAAAAATGCCACTTCAAA
AGAATAAATTTTTCATTCATTCTTATGCAGTATGCTTTTAAATTCTGGAA
TTTTAATTTTCAGACATTGGATTTTGTGGTGCAATAACCACTGTTTCTTG
GCAAATAAAGCAGACTTGATTAGTATGCAATGCTATTTTGTACCTCGGCC
GCGACCAC

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