GR399619
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GR399619 vs. SwissProt
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.178e-27 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHV RKLE R + R LD+HIEE FG GRLLACISSRPGQCGRADGYILEGKELEFYM KLQRKKGKGA+ Sbjct: 148 KKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAS 219
BLAST of GR399619 vs. SwissProt
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.537e-26 Identity = 57/71 (80.28%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGA 213 ++ NHV RKLE R + R LD HIEE FG GRLLACISSRPGQCGRADGYILEGKELEFYM KLQRKKGK A Sbjct: 149 KKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSA 219
BLAST of GR399619 vs. SwissProt
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.879e-26 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGA 213 ++ NHVQRKLE R + R LDSH+EE F GRLLACI+SRPGQCGRADGYILEGKELEFYM KLQ+KKGK A Sbjct: 137 KKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNA 207
BLAST of GR399619 vs. SwissProt
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.994e-25 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NH+ RK+ +R + R LDSHIE+ F GRLLACISSRPGQCGRADGYILEGKELEFYM K+Q+KKGKGAA Sbjct: 151 KKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA 222
BLAST of GR399619 vs. SwissProt
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.107e-25 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGA 213 ++ NHV KLE R + R LD+HIEE FGGG+LLACISSRPGQCG+ADG ILEGKELEFYM KLQRKKGKGA Sbjct: 147 KKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLACISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGA 217
BLAST of GR399619 vs. SwissProt
Match: RS8_RAT (40S ribosomal protein S8 OS=Rattus norvegicus GN=Rps8 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.347e-17 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 16 VQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGK 207 +Q+K + R K ++ S +EE F G+LLACI+SRPGQCGRADGY+LEGKELEFY+ K++ +KGK Sbjct: 145 IQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
BLAST of GR399619 vs. SwissProt
Match: RS8_MOUSE (40S ribosomal protein S8 OS=Mus musculus GN=Rps8 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.347e-17 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 16 VQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGK 207 +Q+K + R K ++ S +EE F G+LLACI+SRPGQCGRADGY+LEGKELEFY+ K++ +KGK Sbjct: 145 IQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
BLAST of GR399619 vs. SwissProt
Match: RS8_MACFA (40S ribosomal protein S8 OS=Macaca fascicularis GN=RPS8 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.347e-17 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 16 VQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGK 207 +Q+K + R K ++ S +EE F G+LLACI+SRPGQCGRADGY+LEGKELEFY+ K++ +KGK Sbjct: 145 IQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
BLAST of GR399619 vs. SwissProt
Match: RS8_HUMAN (40S ribosomal protein S8 OS=Homo sapiens GN=RPS8 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.347e-17 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 16 VQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGK 207 +Q+K + R K ++ S +EE F G+LLACI+SRPGQCGRADGY+LEGKELEFY+ K++ +KGK Sbjct: 145 IQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
BLAST of GR399619 vs. SwissProt
Match: RS8_BOVIN (40S ribosomal protein S8 OS=Bos taurus GN=RPS8 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.347e-17 Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 16 VQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGK 207 +Q+K + R K ++ S +EE F G+LLACI+SRPGQCGRADGY+LEGKELEFY+ K++ +KGK Sbjct: 145 IQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
BLAST of GR399619 vs. TrEMBL
Match: C6T0G7_SOYBN (Ribosomal protein S8 OS=Glycine max PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.608e-29 Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHVQRKLE R K+R+LDSHIEE FGGGRLLACISSRPGQCGRADGYILEGKELEFYM KLQRKKGKGAA Sbjct: 146 KKSNHVQRKLEKRQKDRKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217
BLAST of GR399619 vs. TrEMBL
Match: C6T968_SOYBN (Ribosomal protein S8 OS=Glycine max PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.406e-29 Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHVQRKLE R K+R LDSHIEE FGGGRLLACISSRPGQCGRADGYILEGKELEFYM KLQRKKGKGAA Sbjct: 146 KKSNHVQRKLEKRQKDRNLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 217
BLAST of GR399619 vs. TrEMBL
Match: C6TBA9_SOYBN (Ribosomal protein S8 OS=Glycine max PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.294e-28 Identity = 61/72 (84.72%), Postives = 67/72 (93.06%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHVQRKLE R K+R+LD+HIEE FGGGRLLACISSRPGQCGRADGYILEGKELEFYM KLQ+KKGKGAA Sbjct: 149 KKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 220
BLAST of GR399619 vs. TrEMBL
Match: C6T514_SOYBN (Ribosomal protein S8 (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.294e-28 Identity = 61/81 (75.31%), Postives = 70/81 (86.42%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA*LHCFQIFI 243 ++ NH+QRKLE R K+R+LD+HIEE FGGGRLLACISSRPGQCGRADGYILEGKELEFYM KLQ+KKGKG + F IF+ Sbjct: 148 KKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGCCLILVFPIFL 228
BLAST of GR399619 vs. TrEMBL
Match: B7FMW0_MEDTR (Ribosomal protein S8 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.766e-28 Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ +HVQRKLE R K+RQLDSHIEE FGGGRLLACISSRPGQCGRADGYILEGKELEFYM KLQ+KKGK AA Sbjct: 146 KKSSHVQRKLEQRQKDRQLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKSAA 217
BLAST of GR399619 vs. TrEMBL
Match: B7FGL5_MEDTR (Ribosomal protein S8 OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.766e-28 Identity = 61/72 (84.72%), Postives = 66/72 (91.67%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ +HVQRKLE R K+RQLDSHIEE FGGGRLLACISSRPGQCGRADGYILEGKELEFYM KLQ+KKGK AA Sbjct: 145 KKSSHVQRKLEQRQKDRQLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKSAA 216
BLAST of GR399619 vs. TrEMBL
Match: B6DMH1_9LAMI (Ribosomal protein S8 OS=Picrorhiza kurrooa PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.188e-27 Identity = 60/72 (83.33%), Postives = 65/72 (90.28%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHVQRKLE R +ER++DSHIEE F GGRLLA ISSRPGQCGRADGYILEGKELEFYM KLQRKKGKGAA Sbjct: 145 KKSNHVQRKLEKRQEERKIDSHIEEQFSGGRLLAAISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 216
BLAST of GR399619 vs. TrEMBL
Match: C5YDP0_SORBI (Ribosomal protein S8 OS=Sorghum bicolor GN=Sb06g004770 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.163e-27 Identity = 60/72 (83.33%), Postives = 64/72 (88.89%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHVQRKLE R + R LD+HIEE FG GRLLACISSRPGQCGRADGYILEGKELEFYM KLQRKKGKGAA Sbjct: 148 KKSNHVQRKLEKRQQGRALDTHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 219
BLAST of GR399619 vs. TrEMBL
Match: C5XZ84_SORBI (Ribosomal protein S8 OS=Sorghum bicolor GN=Sb04g028530 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.437e-27 Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHV+RKLE R + R+LD+HIEE FG GRLLACISSRPGQCGRADGYILEGKELEFYM KLQRKKGKGAA Sbjct: 149 KKSNHVKRKLEKRQEGRELDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 220
BLAST of GR399619 vs. TrEMBL
Match: Q7XKS7_ORYSA (Ribosomal protein S8 OS=Oryza sativa GN=OSJNBa0038P21.4 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.275e-27 Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NHV RKLE R + R LDSHIEE FG GRLLACISSRPGQCGRADGYILEGKELEFYM KLQRKKGKGAA Sbjct: 149 KKSNHVVRKLEKRQQTRTLDSHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 220
BLAST of GR399619 vs. TAIR peptide
Match: AT5G59240.1 (| Symbols: | Ribosomal protein S8e family protein | chr5:23902626-23903670 REVERSE LENGTH=210) HSP 1 Score: 117.087 bits (292), Expect = 8.099e-27 Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGA 213 ++ NHVQRKLE R + R LDSH+EE F GRLLACI+SRPGQCGRADGYILEGKELEFYM KLQ+KKGK A Sbjct: 137 KKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNA 207
BLAST of GR399619 vs. TAIR peptide
Match: AT5G20290.1 (| Symbols: | Ribosomal protein S8e family protein | chr5:6851695-6853012 REVERSE LENGTH=222) HSP 1 Score: 115.161 bits (287), Expect = 3.078e-26 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 1 QECNHVQRKLETRPKERQLDSHIEEHFGGGRLLACISSRPGQCGRADGYILEGKELEFYMTKLQRKKGKGAA 216 ++ NH+ RK+ +R + R LDSHIE+ F GRLLACISSRPGQCGRADGYILEGKELEFYM K+Q+KKGKGAA Sbjct: 151 KKSNHLLRKIASRQEGRSLDSHIEDQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA 222 The following BLAST results are available for this feature:
BLAST of GR399619 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Swissprot) Total hits: 10
BLAST of GR399619 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl) Total hits: 10
BLAST of GR399619 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Cicer arietinum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GR399619 ID=GR399619; Name=GR399619; organism=Cicer arietinum; type=EST; length=636bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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