GR405431

EST Overview
NameGR405431
Unique NameGR405431
TypeEST
OrganismCicer arietinum (chickpea)
Sequence length224
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Cicer arietinum unigene v1Cicer arietinum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Cicer arietinum unigene v12010-12-27
Homology Analysis: Cicer arietinum unigene v1 vs Trembl2010-12-28
InterProScan analysis for Cicer arietinum unigene v12010-12-29
Homology
BLAST of GR405431 vs. TrEMBL
Match: C6SZW9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.523e-15
Identity = 42/61 (68.85%), Postives = 44/61 (72.13%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRVNAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            MADDFEFADKVPPSFDR  AGS+GFNP             TFLIGNY LY YAQKT+PPRK
Sbjct:    1 MADDFEFADKVPPSFDR--AGSKGFNPALIVLLLVGGLLLTFLIGNYVLYTYAQKTLPPRK 59          
BLAST of GR405431 vs. TrEMBL
Match: C6SX22_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.607e-14
Identity = 41/66 (62.12%), Postives = 46/66 (69.70%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            MADDF+FADKVPPSFDRV     ++GS+GFNP             TFLIGNY LY YAQKT+PPRK
Sbjct:    1 MADDFDFADKVPPSFDRVGNVIKDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQKTLPPRK 66          
BLAST of GR405431 vs. TrEMBL
Match: C6T1F6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.975e-14
Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRVNAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            MADDFEF+DKVPPSFDRV  GS+GFNP              FL+GNY LY YAQKT+PPRK
Sbjct:    1 MADDFEFSDKVPPSFDRV--GSKGFNPALIVLLLVGGLLLIFLVGNYVLYTYAQKTLPPRK 59          
BLAST of GR405431 vs. TrEMBL
Match: C6SX03_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.975e-14
Identity = 40/66 (60.61%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            MADDF+FADKVPPSFDRV     ++GS+ FNP             TFLIGNY LY YAQKT+PPRK
Sbjct:    1 MADDFDFADKVPPSFDRVGNVIKDSGSKAFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQKTLPPRK 66          
BLAST of GR405431 vs. TrEMBL
Match: D7SKV6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025155001 PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.351e-12
Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            M +DFEFADKVPPSF+R+     +A ++GFNP              FL+GNYALY+YAQKT+PPRK
Sbjct:    1 MEEDFEFADKVPPSFERMGNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRK 66          
BLAST of GR405431 vs. TrEMBL
Match: D7TQI4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025648001 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.192e-9
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            M D+FEFA+KVPPSFDR+     +A ++GFNP              FL+GN+ LYMYAQKT+P  K
Sbjct:    1 MDDEFEFAEKVPPSFDRMENMVKDAEAKGFNPGLIVLLLVVGVLLVFLVGNFLLYMYAQKTLPRMK 66          
BLAST of GR405431 vs. TrEMBL
Match: B9SGP8_RICCO (DNA-binding protein S1FA, putative OS=Ricinus communis GN=RCOM_0819270 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.192e-9
Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            M D+FEFAD  PPSF  +     +  ++GFNP             TFLIGNY LYMYAQKT+PP+K
Sbjct:    1 MDDEFEFADHSPPSFQNMGNVVKDVETKGFNPGLIVLLVIGGIVLTFLIGNYVLYMYAQKTLPPKK 66          
BLAST of GR405431 vs. TrEMBL
Match: A9P8W5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_576667 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.721e-8
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            MADDFEF+D+ PPSF  +     +A  +G NP             +FL+GN+ LY YAQKT+PP+K
Sbjct:    1 MADDFEFSDQSPPSFQNMGNVIKDAEPKGLNPGLIVLLVIGGLLMSFLVGNFVLYTYAQKTLPPKK 66          
BLAST of GR405431 vs. TrEMBL
Match: A9P8U4_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.903e-7
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            M DDFEF++  PPSF  +     +A  +G NP             TFLIGNY LY YAQKT+PPRK
Sbjct:    1 MEDDFEFSNS-PPSFQNMGDLIKDAEPKGLNPGLIVLLVIGGLLLTFLIGNYVLYSYAQKTLPPRK 65          
BLAST of GR405431 vs. TrEMBL
Match: B9MTA0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_675985 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.485e-7
Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 1
Query:   40 MADDFEFADKVPPSFDRV-----NAGSQGFNPXXXXXXXXXXXXXTFLIGNYALYMYAQKTIPPRK 222
            M DDFEF++  PPSF  +     +A  +G NP             TFL+GNY LY YAQKT+PPRK
Sbjct:    1 MEDDFEFSNS-PPSFQNMGDLIKDAEPKGLNPGLIVLLVIGGLLLTFLVGNYVLYSYAQKTLPPRK 65          
The following BLAST results are available for this feature:
BLAST of GR405431 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Cicer arietinum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6SZW9_SOYBN5.523e-1568.85Putative uncharacterized protein OS=Glycine max PE... [more]
C6SX22_SOYBN1.607e-1462.12Putative uncharacterized protein OS=Glycine max PE... [more]
C6T1F6_SOYBN7.975e-1463.93Putative uncharacterized protein OS=Glycine max PE... [more]
C6SX03_SOYBN7.975e-1460.61Putative uncharacterized protein OS=Glycine max PE... [more]
D7SKV6_VITVI3.351e-1254.55Whole genome shotgun sequence of line PN40024, sca... [more]
D7TQI4_VITVI1.192e-950.00Whole genome shotgun sequence of line PN40024, sca... [more]
B9SGP8_RICCO1.192e-950.00DNA-binding protein S1FA, putative OS=Ricinus comm... [more]
A9P8W5_POPTR1.721e-845.45Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A9P8U4_POPTR1.903e-748.48Putative uncharacterized protein OS=Populus tricho... [more]
B9MTA0_POPTR2.485e-746.97Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Cicer arietinum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006779DNA binding protein S1FAPFAMPF04689S1FAcoord: 32..74
score: 1.2
NoneNo IPR availableSEGsegsegcoord: 41..53
score

Properties
Property NameValue
Singlet in analysisCicer arietinum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GR405431 ID=GR405431; Name=GR405431; organism=Cicer arietinum; type=EST; length=224bp
GATTTGGCACCATCACAGTTTCTCAGCGTCAGCTCAGCCATGGCCGATGA
CTTTGAGTTTGCCGATAAAGTTCCTCCTTCCTTCGACCGCGTGAATGCTG
GATCACAAGGGTTCAACCCAGGCTTAATAGTTCTGCTGGTGGTTGGTGGG
TTGCTTTTGACATTCCTCATTGGAAATTATGCGCTCTACATGTATGCACA
GAAGACCATTCCTCCTAGAAAAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0045449regulation of transcription
Vocabulary: INTERPRO
TermDefinition
IPR006779S1FA_DNA-bd